RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 TMC2Q8TDI7 906 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 TAS1R2Q8TE23 839 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 NLRP7Q8WX94 980 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 KAT5Q92993 513 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 ERO1AQ96HE7 468 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 OSMRQ99650 979 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 MTG1Q9BT17 334 aaPredicted RBP9.05□□□□□ -0.96
GTF3A-206ENST00000470606 C2orf40Q9H1Z8 148 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 CDT1Q9H211 546 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 PDZD7Q9H5P4 517 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 KCND1Q9NSA2 647 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 DDX20Q9UHI6 824 aaKnown RBP9.05□□□□□ -0.96
GTF3A-206ENST00000470606 GTF2IRD1Q9UHL9 959 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 TNFSF13BQ9Y275 285 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 C17orf102A2RUQ5 167 aa9.04□□□□□ -0.96
GTF3A-206ENST00000470606 ZNF233A6NK53 670 aa9.04□□□□□ -0.96
GTF3A-206ENST00000470606 FANCGO15287 622 aa9.04□□□□□ -0.96
GTF3A-206ENST00000470606 PMM2O15305 246 aa9.04□□□□□ -0.96
GTF3A-206ENST00000470606 VNN1O95497 513 aa9.04□□□□□ -0.96
GTF3A-206ENST00000470606 GNRH1P01148 92 aa9.04□□□□□ -0.96
GTF3A-206ENST00000470606 PHKA2P46019 1235 aa9.04□□□□□ -0.96
GTF3A-206ENST00000470606 JAM2P57087 298 aa9.04□□□□□ -0.96
GTF3A-206ENST00000470606 PSMD6Q15008 389 aa9.04□□□□□ -0.96
GTF3A-206ENST00000470606 ARHGEF19Q8IW93 802 aa9.04□□□□□ -0.96
GTF3A-206ENST00000470606 C7orf31Q8N865 590 aa9.04□□□□□ -0.96
GTF3A-206ENST00000470606 SH3TC2Q8TF17 1288 aa9.04□□□□□ -0.96
GTF3A-206ENST00000470606 MAP7D2Q96T17 732 aa9.04□□□□□ -0.96
GTF3A-206ENST00000470606 INTS2Q9H0H0 1204 aaKnown RBP9.04□□□□□ -0.96
GTF3A-206ENST00000470606 PRMT7Q9NVM4 692 aaPredicted RBP9.04□□□□□ -0.96
GTF3A-206ENST00000470606 RBAKQ9NYW8 714 aaPredicted RBP9.04□□□□□ -0.96
GTF3A-206ENST00000470606 CPSF3Q9UKF6 684 aaKnown RBP9.04□□□□□ -0.96
GTF3A-206ENST00000470606 TFR2Q9UP52 801 aa9.04□□□□□ -0.96
GTF3A-206ENST00000470606 COQ4Q9Y3A0 265 aa9.04□□□□□ -0.96
GTF3A-206ENST00000470606 ADGRG1Q9Y653 693 aa9.04□□□□□ -0.96
GTF3A-206ENST00000470606 A0A1B0GUA9 196 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 OGTO15294 1046 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 C4BPAP04003 597 aaKnown RBP9.03□□□□□ -0.96
GTF3A-206ENST00000470606 DARSP14868 501 aaKnown RBP9.03□□□□□ -0.96
GTF3A-206ENST00000470606 GRK4P32298 578 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 CLCN1P35523 988 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 MXI1P50539 228 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 OSTNP61366 133 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 SNX17Q15036 470 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 ENOX2Q16206 610 aaKnown RBP9.03□□□□□ -0.96
GTF3A-206ENST00000470606 ASTE1Q2TB18 679 aaPredicted RBP9.03□□□□□ -0.96
GTF3A-206ENST00000470606 ZACNQ401N2 412 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 TDRD10Q5VZ19 366 aaKnown RBP9.03□□□□□ -0.96
GTF3A-206ENST00000470606 MPZL3Q6UWV2 235 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 IRF2BP2Q7Z5L9 587 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 ZNF410Q86VK4 478 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 THNSL1Q8IYQ7 743 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 EHBP1Q8NDI1 1231 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 ACRBPQ8NEB7 543 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 PPP1R13BQ96KQ4 1090 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 TCHPQ9BT92 498 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 PI4K2AQ9BTU6 479 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 KATNAL1Q9BW62 490 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 EDEM3Q9BZQ6 932 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 FBXL5Q9UKA1 691 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 PPP2R2CQ9Y2T4 447 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 TRIM17Q9Y577 477 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 MYH10P35580 1976 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 SCN1AP35498 2009 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 TULP1O00294 542 aaPredicted RBP9.03□□□□□ -0.96
GTF3A-206ENST00000470606 KPNA6O60684 536 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 TPM1P09493 284 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 MATR3P43243 847 aaKnown RBP eCLIP9.03□□□□□ -0.96
GTF3A-206ENST00000470606 CDK17Q00537 523 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 ZNF568Q3ZCX4 644 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 CYP26C1Q6V0L0 522 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 NYAP1Q6ZVC0 841 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 SRGAP1Q7Z6B7 1085 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 SERINC5Q86VE9 423 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 TMTC1Q8IUR5 882 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 BRSK2Q8IWQ3 736 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 EFCAB13Q8IY85 973 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 PIAS4Q8N2W9 510 aaPredicted RBP9.03□□□□□ -0.96
GTF3A-206ENST00000470606 DNAJC5GQ8N7S2 189 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 KREMEN1Q96MU8 473 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 NHEJ1Q9H9Q4 299 aaPredicted RBP9.03□□□□□ -0.96
GTF3A-206ENST00000470606 KIAA1586Q9HCI6 787 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 TMEM8AQ9HCN3 771 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 WBP1LQ9NX94 342 aa9.03□□□□□ -0.96
GTF3A-206ENST00000470606 RCCD1A6NED2 376 aa9.02□□□□□ -0.97
GTF3A-206ENST00000470606 KIAA0391O15091 583 aaKnown RBP9.02□□□□□ -0.97
GTF3A-206ENST00000470606 P4HA2O15460 535 aa9.02□□□□□ -0.97
GTF3A-206ENST00000470606 ZEB2O60315 1214 aa9.02□□□□□ -0.97
GTF3A-206ENST00000470606 NDUFA10O95299 355 aa9.02□□□□□ -0.97
GTF3A-206ENST00000470606 CHRNA1P02708 482 aa9.02□□□□□ -0.97
GTF3A-206ENST00000470606 CXCL8P10145 99 aa9.02□□□□□ -0.97
GTF3A-206ENST00000470606 HSPA6P17066 643 aa9.02□□□□□ -0.97
GTF3A-206ENST00000470606 EIF4BP23588 611 aaKnown RBP9.02□□□□□ -0.97
GTF3A-206ENST00000470606 ACLYP53396 1101 aa9.02□□□□□ -0.97
GTF3A-206ENST00000470606 MTFR1Q15390 333 aa9.02□□□□□ -0.97
GTF3A-206ENST00000470606 KRT39Q6A163 491 aa9.02□□□□□ -0.97
GTF3A-206ENST00000470606 CACNA2D4Q7Z3S7 1137 aa9.02□□□□□ -0.97
GTF3A-206ENST00000470606 SLAIN1Q8ND83 568 aa9.02□□□□□ -0.97
GTF3A-206ENST00000470606 HELQQ8TDG4 1101 aa9.02□□□□□ -0.97
GTF3A-206ENST00000470606 DHX38Q92620 1227 aaKnown RBP9.02□□□□□ -0.97
GTF3A-206ENST00000470606 TATDN2Q93075 761 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms