RNA–Protein interactions for RNA: ENST00000470347.1

SYPL1-205, Transcript of synaptophysin like 1, humanhuman

TSL 3 BASIC

Gene SYPL1, Length 1,193 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-205ENST00000470347 TCP10Q12799 353 aa7.16□□□□□ -1.26
SYPL1-205ENST00000470347 ATG9AQ7Z3C6 839 aa7.16□□□□□ -1.26
SYPL1-205ENST00000470347 ERC1Q8IUD2 1116 aa7.16□□□□□ -1.26
SYPL1-205ENST00000470347 SCYL3Q8IZE3 742 aa7.16□□□□□ -1.26
SYPL1-205ENST00000470347 ZNF654Q8IZM8 581 aa7.16□□□□□ -1.26
SYPL1-205ENST00000470347 U2AF1L4Q8WU68 220 aaKnown RBP7.16□□□□□ -1.26
SYPL1-205ENST00000470347 DPF3Q92784 378 aa7.16□□□□□ -1.26
SYPL1-205ENST00000470347 GPATCH3Q96I76 525 aa7.16□□□□□ -1.26
SYPL1-205ENST00000470347 TMX3Q96JJ7 454 aa7.16□□□□□ -1.26
SYPL1-205ENST00000470347 FERD3LQ96RJ6 166 aa7.16□□□□□ -1.26
SYPL1-205ENST00000470347 MTA3Q9BTC8 594 aa7.16□□□□□ -1.26
SYPL1-205ENST00000470347 TM6SF1Q9BZW5 370 aa7.16□□□□□ -1.26
SYPL1-205ENST00000470347 USP44Q9H0E7 712 aa7.16□□□□□ -1.26
SYPL1-205ENST00000470347 RWDD3Q9Y3V2 267 aa7.16□□□□□ -1.26
SYPL1-205ENST00000470347 GAKO14976 1311 aa7.16□□□□□ -1.26
SYPL1-205ENST00000470347 A0A1W2PPC1 479 aa7.15□□□□□ -1.26
SYPL1-205ENST00000470347 CIAO1O76071 339 aa7.15□□□□□ -1.26
SYPL1-205ENST00000470347 PLATP00750 562 aa7.15□□□□□ -1.26
SYPL1-205ENST00000470347 HSPA4P34932 840 aa7.15□□□□□ -1.26
SYPL1-205ENST00000470347 GTF2F1P35269 517 aaKnown RBP eCLIP7.15□□□□□ -1.26
SYPL1-205ENST00000470347 TCEAL1Q15170 157 aa7.15□□□□□ -1.26
SYPL1-205ENST00000470347 ANKRD1Q15327 319 aa7.15□□□□□ -1.26
SYPL1-205ENST00000470347 SF3A1Q15459 793 aaKnown RBP7.15□□□□□ -1.26
SYPL1-205ENST00000470347 ATP2B3Q16720 1220 aa7.15□□□□□ -1.26
SYPL1-205ENST00000470347 NAALADL2Q58DX5 795 aa7.15□□□□□ -1.26
SYPL1-205ENST00000470347 IDI2Q9BXS1 227 aa7.15□□□□□ -1.26
SYPL1-205ENST00000470347 DIAPH3Q9NSV4 1193 aa7.15□□□□□ -1.26
SYPL1-205ENST00000470347 GABRQQ9UN88 632 aa7.15□□□□□ -1.26
SYPL1-205ENST00000470347 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.15□□□□□ -1.26
SYPL1-205ENST00000470347 SLC45A1Q9Y2W3 748 aa7.15□□□□□ -1.26
SYPL1-205ENST00000470347 PDS5AQ29RF7 1337 aaKnown RBP7.15□□□□□ -1.26
SYPL1-205ENST00000470347 RAD50Q92878 1312 aa7.15□□□□□ -1.26
SYPL1-205ENST00000470347 COL2A1P02458 1487 aaPredicted RBP7.15□□□□□ -1.27
SYPL1-205ENST00000470347 DDX60LQ5H9U9 1706 aaKnown RBP7.15□□□□□ -1.27
SYPL1-205ENST00000470347 SIPA1L1O43166 1804 aa7.15□□□□□ -1.27
SYPL1-205ENST00000470347 TNPO2O14787 897 aaKnown RBP7.14□□□□□ -1.27
SYPL1-205ENST00000470347 ADCY3O60266 1144 aa7.14□□□□□ -1.27
SYPL1-205ENST00000470347 ENTPD3O75355 529 aa7.14□□□□□ -1.27
SYPL1-205ENST00000470347 SGPL1O95470 568 aa7.14□□□□□ -1.27
SYPL1-205ENST00000470347 PTMAP06454 111 aaKnown RBP7.14□□□□□ -1.27
SYPL1-205ENST00000470347 ZNF20P17024 532 aa7.14□□□□□ -1.27
SYPL1-205ENST00000470347 CHMLP26374 656 aa7.14□□□□□ -1.27
SYPL1-205ENST00000470347 PHKA1P46020 1223 aa7.14□□□□□ -1.27
SYPL1-205ENST00000470347 FLT3LGP49771 235 aa7.14□□□□□ -1.27
SYPL1-205ENST00000470347 PPP2R5DQ14738 602 aa7.14□□□□□ -1.27
SYPL1-205ENST00000470347 SYCP1Q15431 976 aa7.14□□□□□ -1.27
SYPL1-205ENST00000470347 RUFY4Q6ZNE9 571 aa7.14□□□□□ -1.27
SYPL1-205ENST00000470347 GADL1Q6ZQY3 521 aa7.14□□□□□ -1.27
SYPL1-205ENST00000470347 FASTKD5Q7L8L6 764 aaKnown RBP7.14□□□□□ -1.27
SYPL1-205ENST00000470347 ZFPM1Q8IX07 1006 aa7.14□□□□□ -1.27
SYPL1-205ENST00000470347 DOCK3Q8IZD9 2030 aa7.14□□□□□ -1.27
SYPL1-205ENST00000470347 SSH3Q8TE77 659 aa7.14□□□□□ -1.27
SYPL1-205ENST00000470347 KIF1BPQ96EK5 621 aa7.14□□□□□ -1.27
SYPL1-205ENST00000470347 DDX11Q96FC9 970 aa7.14□□□□□ -1.27
SYPL1-205ENST00000470347 C8orf49Q96NF6 230 aa7.14□□□□□ -1.27
SYPL1-205ENST00000470347 SIL1Q9H173 461 aa7.14□□□□□ -1.27
SYPL1-205ENST00000470347 ALDH8A1Q9H2A2 487 aaPredicted RBP7.14□□□□□ -1.27
SYPL1-205ENST00000470347 GNL3LQ9NVN8 582 aaKnown RBP7.14□□□□□ -1.27
SYPL1-205ENST00000470347 WHRNQ9P202 907 aa7.14□□□□□ -1.27
SYPL1-205ENST00000470347 DENND2AQ9ULE3 1009 aa7.14□□□□□ -1.27
SYPL1-205ENST00000470347 LIMCH1Q9UPQ0 1083 aa7.14□□□□□ -1.27
SYPL1-205ENST00000470347 AFG3L2Q9Y4W6 797 aa7.14□□□□□ -1.27
SYPL1-205ENST00000470347 NR2E3Q9Y5X4 410 aa7.14□□□□□ -1.27
SYPL1-205ENST00000470347 ZHX2Q9Y6X8 837 aa7.14□□□□□ -1.27
SYPL1-205ENST00000470347 MUC3AQ02505 3323 aa7.14□□□□□ -1.27
SYPL1-205ENST00000470347 PLXNB2O15031 1838 aa7.13□□□□□ -1.27
SYPL1-205ENST00000470347 PRUNE2Q8WUY3 3088 aa7.13□□□□□ -1.27
SYPL1-205ENST00000470347 MROH7-TTC4A0A0A0MT08 1334 aa7.13□□□□□ -1.27
SYPL1-205ENST00000470347 ELP1O95163 1332 aa7.13□□□□□ -1.27
SYPL1-205ENST00000470347 DDTLA6NHG4 134 aaPredicted RBP7.13□□□□□ -1.27
SYPL1-205ENST00000470347 SMARCA5O60264 1052 aaPredicted RBP7.13□□□□□ -1.27
SYPL1-205ENST00000470347 GLRX3O76003 335 aaKnown RBP7.13□□□□□ -1.27
SYPL1-205ENST00000470347 UBTFL1P0CB47 393 aaPredicted RBP7.13□□□□□ -1.27
SYPL1-205ENST00000470347 ADORA1P30542 326 aa7.13□□□□□ -1.27
SYPL1-205ENST00000470347 SMAD4Q13485 552 aaKnown RBP7.13□□□□□ -1.27
SYPL1-205ENST00000470347 RASGRF1Q13972 1273 aa7.13□□□□□ -1.27
SYPL1-205ENST00000470347 FAM110CQ1W6H9 321 aa7.13□□□□□ -1.27
SYPL1-205ENST00000470347 VPS53Q5VIR6 699 aa7.13□□□□□ -1.27
SYPL1-205ENST00000470347 WWC2Q6AWC2 1192 aa7.13□□□□□ -1.27
SYPL1-205ENST00000470347 DZIP1Q86YF9 867 aaKnown RBP7.13□□□□□ -1.27
SYPL1-205ENST00000470347 SMAP1Q8IYB5 467 aaPredicted RBP7.13□□□□□ -1.27
SYPL1-205ENST00000470347 PDCL2Q8N4E4 241 aa7.13□□□□□ -1.27
SYPL1-205ENST00000470347 ZGPATQ8N5A5 531 aaKnown RBP7.13□□□□□ -1.27
SYPL1-205ENST00000470347 SLC16A11Q8NCK7 471 aa7.13□□□□□ -1.27
SYPL1-205ENST00000470347 GPT2Q8TD30 523 aa7.13□□□□□ -1.27
SYPL1-205ENST00000470347 SMCR8Q8TEV9 937 aaPredicted RBP7.13□□□□□ -1.27
SYPL1-205ENST00000470347 SREK1Q8WXA9 508 aaKnown RBP7.13□□□□□ -1.27
SYPL1-205ENST00000470347 PIBF1Q8WXW3 757 aa7.13□□□□□ -1.27
SYPL1-205ENST00000470347 LOXL4Q96JB6 756 aa7.13□□□□□ -1.27
SYPL1-205ENST00000470347 MEIS3Q99687 375 aa7.13□□□□□ -1.27
SYPL1-205ENST00000470347 SSBP3Q9BWW4 388 aaPredicted RBP7.13□□□□□ -1.27
SYPL1-205ENST00000470347 DDX4Q9NQI0 724 aaKnown RBP7.13□□□□□ -1.27
SYPL1-205ENST00000470347 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.13□□□□□ -1.27
SYPL1-205ENST00000470347 DDX41Q9UJV9 622 aaKnown RBP7.13□□□□□ -1.27
SYPL1-205ENST00000470347 AGTPBP1Q9UPW5 1226 aa7.13□□□□□ -1.27
SYPL1-205ENST00000470347 LRRFIP2Q9Y608 721 aaKnown RBP7.13□□□□□ -1.27
SYPL1-205ENST00000470347 FOCADQ5VW36 1801 aa7.13□□□□□ -1.27
SYPL1-205ENST00000470347 TRIM75PA6NK02 468 aa7.12□□□□□ -1.27
SYPL1-205ENST00000470347 STXBP3O00186 592 aa7.12□□□□□ -1.27
SYPL1-205ENST00000470347 NEMFO60524 1076 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms