RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 ARSHQ5FYA8 562 aa15.47■□□□□ 0.07
COMMD3-208ENST00000470045 SLC22A17Q8WUG5 538 aa15.47■□□□□ 0.07
COMMD3-208ENST00000470045 CALML4Q96GE6 196 aa15.47■□□□□ 0.07
COMMD3-208ENST00000470045 RPS6KC1Q96S38 1066 aa15.47■□□□□ 0.07
COMMD3-208ENST00000470045 ACO2Q99798 780 aaKnown RBP15.47■□□□□ 0.07
COMMD3-208ENST00000470045 CCSER1Q9C0I3 900 aa15.47■□□□□ 0.07
COMMD3-208ENST00000470045 SNTG2Q9NY99 539 aa15.47■□□□□ 0.07
COMMD3-208ENST00000470045 SFI1A8K8P3 1242 aa15.46■□□□□ 0.07
COMMD3-208ENST00000470045 F8W810 466 aa15.46■□□□□ 0.07
COMMD3-208ENST00000470045 PI4K2BG5E9Z4 385 aa15.46■□□□□ 0.07
COMMD3-208ENST00000470045 ABLIM1O14639 778 aa15.46■□□□□ 0.07
COMMD3-208ENST00000470045 BRD1O95696 1058 aa15.46■□□□□ 0.07
COMMD3-208ENST00000470045 SSBP05455 408 aaKnown RBP eCLIP15.46■□□□□ 0.07
COMMD3-208ENST00000470045 PLCG1P19174 1290 aa15.46■□□□□ 0.07
COMMD3-208ENST00000470045 PROZP22891 400 aa15.46■□□□□ 0.07
COMMD3-208ENST00000470045 SSTR3P32745 418 aaPredicted RBP15.46■□□□□ 0.07
COMMD3-208ENST00000470045 TUSC3Q13454 348 aa15.46■□□□□ 0.07
COMMD3-208ENST00000470045 LLGL2Q6P1M3 1020 aa15.46■□□□□ 0.07
COMMD3-208ENST00000470045 FAM173BQ6P4H8 233 aa15.46■□□□□ 0.07
COMMD3-208ENST00000470045 TMEM161BQ8NDZ6 487 aa15.46■□□□□ 0.07
COMMD3-208ENST00000470045 MRPL4Q9BYD3 311 aaKnown RBP15.46■□□□□ 0.07
COMMD3-208ENST00000470045 CDT1Q9H211 546 aa15.46■□□□□ 0.07
COMMD3-208ENST00000470045 CXCL16Q9H2A7 254 aa15.46■□□□□ 0.07
COMMD3-208ENST00000470045 EPHX3Q9H6B9 360 aa15.46■□□□□ 0.07
COMMD3-208ENST00000470045 KCNG1Q9UIX4 513 aa15.46■□□□□ 0.07
COMMD3-208ENST00000470045 FBXO2Q9UK22 296 aaPredicted RBP15.46■□□□□ 0.07
COMMD3-208ENST00000470045 ODF2LQ9ULJ1 636 aa15.46■□□□□ 0.07
COMMD3-208ENST00000470045 VWA8A3KMH1 1905 aa15.45■□□□□ 0.06
COMMD3-208ENST00000470045 SLC16A4O15374 487 aa15.45■□□□□ 0.06
COMMD3-208ENST00000470045 STX6O43752 255 aa15.45■□□□□ 0.06
COMMD3-208ENST00000470045 NR1I2O75469 434 aa15.45■□□□□ 0.06
COMMD3-208ENST00000470045 GRM5P41594 1212 aa15.45■□□□□ 0.06
COMMD3-208ENST00000470045 NCKAP1LP55160 1127 aa15.45■□□□□ 0.06
COMMD3-208ENST00000470045 RAD51AP2Q09MP3 1159 aa15.45■□□□□ 0.06
COMMD3-208ENST00000470045 KARSQ15046 597 aaKnown RBP15.45■□□□□ 0.06
COMMD3-208ENST00000470045 APBB1IPQ7Z5R6 666 aaPredicted RBP15.45■□□□□ 0.06
COMMD3-208ENST00000470045 GPR65Q8IYL9 337 aa15.45■□□□□ 0.06
COMMD3-208ENST00000470045 RAD54LQ92698 747 aa15.45■□□□□ 0.06
COMMD3-208ENST00000470045 TARS2Q9BW92 718 aaKnown RBP15.45■□□□□ 0.06
COMMD3-208ENST00000470045 COLEC11Q9BWP8 271 aa15.45■□□□□ 0.06
COMMD3-208ENST00000470045 C1QTNF1Q9BXJ1 281 aa15.45■□□□□ 0.06
COMMD3-208ENST00000470045 ZSCAN16Q9H4T2 348 aaPredicted RBP15.45■□□□□ 0.06
COMMD3-208ENST00000470045 MRPL17Q9NRX2 175 aaKnown RBP15.45■□□□□ 0.06
COMMD3-208ENST00000470045 CHST7Q9NS84 486 aa15.45■□□□□ 0.06
COMMD3-208ENST00000470045 ADAM28Q9UKQ2 775 aa15.45■□□□□ 0.06
COMMD3-208ENST00000470045 SRPRBQ9Y5M8 271 aaKnown RBP15.45■□□□□ 0.06
COMMD3-208ENST00000470045 C2orf16Q68DN1 1984 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 NPHP3-ACAD11A0A0J9YXS1 232 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 LOC730098B7Z3J9 87 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 URODP06132 367 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 THP07101 528 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 CNPP09543 421 aaKnown RBP15.44■□□□□ 0.06
COMMD3-208ENST00000470045 MAPTP10636 758 aaKnown RBP15.44■□□□□ 0.06
COMMD3-208ENST00000470045 EPCAMP16422 314 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 CA8P35219 290 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 GLUD2P49448 558 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 ZNF131P52739 623 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 DSG1Q02413 1049 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 CBX2Q14781 532 aaPredicted RBP15.44■□□□□ 0.06
COMMD3-208ENST00000470045 ZNF568Q3ZCX4 644 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 TPRNQ4KMQ1 711 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 XKR4Q5GH76 650 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 KIAA0319Q5VV43 1072 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 FUT10Q6P4F1 479 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 USP49Q70CQ1 688 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 TAS1R1Q7RTX1 841 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 PPFIBP1Q86W92 1011 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 GPBP1Q86WP2 473 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 CEP120Q8N960 986 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 KLHL5Q96PQ7 755 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 PPP1R10Q96QC0 940 aaKnown RBP15.44■□□□□ 0.06
COMMD3-208ENST00000470045 USP28Q96RU2 1077 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 REEP2Q9BRK0 252 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 PAAF1Q9BRP4 392 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 PHF7Q9BWX1 381 aaPredicted RBP15.44■□□□□ 0.06
COMMD3-208ENST00000470045 EMILIN2Q9BXX0 1053 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 GPR62Q9BZJ7 368 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 RXFP1Q9HBX9 757 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 DZANK1Q9NVP4 752 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 LARSQ9P2J5 1176 aaKnown RBP15.44■□□□□ 0.06
COMMD3-208ENST00000470045 SSX2IPQ9Y2D8 614 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 GDAQ9Y2T3 454 aa15.44■□□□□ 0.06
COMMD3-208ENST00000470045 MTCL1Q9Y4B5 1905 aaKnown RBP15.44■□□□□ 0.06
COMMD3-208ENST00000470045 MCF2P10911 925 aa15.43■□□□□ 0.06
COMMD3-208ENST00000470045 MARCKSP29966 332 aaPredicted RBP15.43■□□□□ 0.06
COMMD3-208ENST00000470045 CLCN4P51793 760 aa15.43■□□□□ 0.06
COMMD3-208ENST00000470045 SMTNP53814 917 aa15.43■□□□□ 0.06
COMMD3-208ENST00000470045 ITIH3Q06033 890 aa15.43■□□□□ 0.06
COMMD3-208ENST00000470045 MCM6Q14566 821 aa15.43■□□□□ 0.06
COMMD3-208ENST00000470045 HSP90AA2PQ14568 343 aaPredicted RBP15.43■□□□□ 0.06
COMMD3-208ENST00000470045 MPZL3Q6UWV2 235 aa15.43■□□□□ 0.06
COMMD3-208ENST00000470045 ALKAL1Q6UXT8 129 aa15.43■□□□□ 0.06
COMMD3-208ENST00000470045 ZPBP2Q6X784 338 aa15.43■□□□□ 0.06
COMMD3-208ENST00000470045 LARP4BQ92615 738 aaKnown RBP15.43■□□□□ 0.06
COMMD3-208ENST00000470045 EPSTI1Q96J88 318 aa15.43■□□□□ 0.06
COMMD3-208ENST00000470045 ADAM7Q9H2U9 754 aa15.43■□□□□ 0.06
COMMD3-208ENST00000470045 C11orf16Q9NQ32 467 aa15.43■□□□□ 0.06
COMMD3-208ENST00000470045 CACNG4Q9UBN1 327 aa15.43■□□□□ 0.06
COMMD3-208ENST00000470045 CASTOR2A6NHX0 329 aa15.42■□□□□ 0.06
COMMD3-208ENST00000470045 H0YCG3 227 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms