RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 POLD4Q9HCU8 107 aa17.98■□□□□ 0.47
COL9A3-208ENST00000469802 SNTG2Q9NY99 539 aa17.98■□□□□ 0.47
COL9A3-208ENST00000469802 ADAM28Q9UKQ2 775 aa17.98■□□□□ 0.47
COL9A3-208ENST00000469802 USTQ9Y2C2 406 aa17.98■□□□□ 0.47
COL9A3-208ENST00000469802 PHLPP2Q6ZVD8 1323 aa17.98■□□□□ 0.47
COL9A3-208ENST00000469802 CDC25AP30304 524 aa17.97■□□□□ 0.47
COL9A3-208ENST00000469802 MCM2P49736 904 aa17.97■□□□□ 0.47
COL9A3-208ENST00000469802 MAPK7Q13164 816 aa17.97■□□□□ 0.47
COL9A3-208ENST00000469802 TUSC3Q13454 348 aa17.97■□□□□ 0.47
COL9A3-208ENST00000469802 DCAF4L1Q3SXM0 396 aa17.97■□□□□ 0.47
COL9A3-208ENST00000469802 ATAT1Q5SQI0 421 aa17.97■□□□□ 0.47
COL9A3-208ENST00000469802 HYIQ5T013 277 aa17.97■□□□□ 0.47
COL9A3-208ENST00000469802 NT5DC1Q5TFE4 455 aa17.97■□□□□ 0.47
COL9A3-208ENST00000469802 KRT79Q5XKE5 535 aa17.97■□□□□ 0.47
COL9A3-208ENST00000469802 TMC5Q6UXY8 1006 aa17.97■□□□□ 0.47
COL9A3-208ENST00000469802 DTHD1Q6ZMT9 781 aa17.97■□□□□ 0.47
COL9A3-208ENST00000469802 C15orf39Q6ZRI6 1047 aa17.97■□□□□ 0.47
COL9A3-208ENST00000469802 CMASQ8NFW8 434 aaPredicted RBP17.97■□□□□ 0.47
COL9A3-208ENST00000469802 MFSD14AQ96MC6 490 aa17.97■□□□□ 0.47
COL9A3-208ENST00000469802 PAAF1Q9BRP4 392 aa17.97■□□□□ 0.47
COL9A3-208ENST00000469802 ADPGKQ9BRR6 497 aa17.97■□□□□ 0.47
COL9A3-208ENST00000469802 RUSC1Q9BVN2 902 aa17.97■□□□□ 0.47
COL9A3-208ENST00000469802 UPF2Q9HAU5 1272 aaKnown RBP17.97■□□□□ 0.47
COL9A3-208ENST00000469802 MAN1C1Q9NR34 630 aa17.97■□□□□ 0.47
COL9A3-208ENST00000469802 TSHZ2Q9NRE2 1034 aa17.97■□□□□ 0.47
COL9A3-208ENST00000469802 CACNG4Q9UBN1 327 aa17.97■□□□□ 0.47
COL9A3-208ENST00000469802 C1RP00736 705 aa17.96■□□□□ 0.47
COL9A3-208ENST00000469802 HSP90AA2PQ14568 343 aaPredicted RBP17.96■□□□□ 0.47
COL9A3-208ENST00000469802 MCTP1Q6DN14 999 aa17.96■□□□□ 0.47
COL9A3-208ENST00000469802 C1orf186Q6ZWK4 172 aa17.96■□□□□ 0.47
COL9A3-208ENST00000469802 ZDHHC14Q8IZN3 488 aa17.96■□□□□ 0.47
COL9A3-208ENST00000469802 TDRD5Q8NAT2 981 aaKnown RBP17.96■□□□□ 0.47
COL9A3-208ENST00000469802 B3GALT6Q96L58 329 aa17.96■□□□□ 0.47
COL9A3-208ENST00000469802 RHOBTB2Q9BYZ6 727 aa17.96■□□□□ 0.47
COL9A3-208ENST00000469802 ARHGAP28Q9P2N2 729 aa17.96■□□□□ 0.47
COL9A3-208ENST00000469802 DNM3Q9UQ16 869 aa17.96■□□□□ 0.47
COL9A3-208ENST00000469802 SF3B1O75533 1304 aaKnown RBP eCLIP17.96■□□□□ 0.468e-6■■■■■ 107
COL9A3-208ENST00000469802 HIP1RO75146 1068 aa17.95■□□□□ 0.46
COL9A3-208ENST00000469802 KIF4AO95239 1232 aa17.95■□□□□ 0.46
COL9A3-208ENST00000469802 GLUD1P00367 558 aa17.95■□□□□ 0.46
COL9A3-208ENST00000469802 LIG1P18858 919 aa17.95■□□□□ 0.46
COL9A3-208ENST00000469802 HOXD11P31277 338 aaPredicted RBP17.95■□□□□ 0.46
COL9A3-208ENST00000469802 NPTX2P47972 431 aa17.95■□□□□ 0.46
COL9A3-208ENST00000469802 TMEM132AQ24JP5 1023 aa17.95■□□□□ 0.46
COL9A3-208ENST00000469802 USP41Q3LFD5 358 aa17.95■□□□□ 0.46
COL9A3-208ENST00000469802 ATF7IP2Q5U623 682 aa17.95■□□□□ 0.46
COL9A3-208ENST00000469802 RINT1Q6NUQ1 792 aa17.95■□□□□ 0.46
COL9A3-208ENST00000469802 TAS1R3Q7RTX0 852 aa17.95■□□□□ 0.46
COL9A3-208ENST00000469802 RABGGTAQ92696 567 aa17.95■□□□□ 0.46
COL9A3-208ENST00000469802 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.95■□□□□ 0.46
COL9A3-208ENST00000469802 FNIP2Q9P278 1114 aa17.95■□□□□ 0.46
COL9A3-208ENST00000469802 SORCS3Q9UPU3 1222 aa17.95■□□□□ 0.46
COL9A3-208ENST00000469802 TNFSF13BQ9Y275 285 aa17.95■□□□□ 0.46
COL9A3-208ENST00000469802 DOCK6Q96HP0 2047 aa17.94■□□□□ 0.46
COL9A3-208ENST00000469802 CASTOR2A6NHX0 329 aa17.94■□□□□ 0.46
COL9A3-208ENST00000469802 THP07101 528 aa17.94■□□□□ 0.46
COL9A3-208ENST00000469802 GUCY2CP25092 1073 aa17.94■□□□□ 0.46
COL9A3-208ENST00000469802 PEX3P56589 373 aa17.94■□□□□ 0.46
COL9A3-208ENST00000469802 DMP1Q13316 513 aaPredicted RBP17.94■□□□□ 0.46
COL9A3-208ENST00000469802 RTP2Q5QGT7 225 aa17.94■□□□□ 0.46
COL9A3-208ENST00000469802 ARL6IP4Q66PJ3 421 aaKnown RBP17.94■□□□□ 0.46
COL9A3-208ENST00000469802 CCDC149Q6ZUS6 474 aa17.94■□□□□ 0.46
COL9A3-208ENST00000469802 KCTD17Q8N5Z5 321 aa17.94■□□□□ 0.46
COL9A3-208ENST00000469802 KREMEN2Q8NCW0 462 aa17.94■□□□□ 0.46
COL9A3-208ENST00000469802 HDAC7Q8WUI4 952 aa17.94■□□□□ 0.46
COL9A3-208ENST00000469802 PBXIP1Q96AQ6 731 aa17.94■□□□□ 0.46
COL9A3-208ENST00000469802 DRC1Q96MC2 740 aa17.94■□□□□ 0.46
COL9A3-208ENST00000469802 PNMA5Q96PV4 448 aa17.94■□□□□ 0.46
COL9A3-208ENST00000469802 PPP1R10Q96QC0 940 aaKnown RBP17.94■□□□□ 0.46
COL9A3-208ENST00000469802 TMEM134Q9H6X4 195 aa17.94■□□□□ 0.46
COL9A3-208ENST00000469802 C17orf75Q9HAS0 396 aa17.94■□□□□ 0.46
COL9A3-208ENST00000469802 PTPRHQ9HD43 1115 aa17.94■□□□□ 0.46
COL9A3-208ENST00000469802 PIEZO1Q92508 2521 aa17.94■□□□□ 0.46
COL9A3-208ENST00000469802 H3BQV1 296 aa17.93■□□□□ 0.46
COL9A3-208ENST00000469802 K7ERI5 159 aa17.93■□□□□ 0.46
COL9A3-208ENST00000469802 ABLIM1O14639 778 aa17.93■□□□□ 0.46
COL9A3-208ENST00000469802 BRD1O95696 1058 aa17.93■□□□□ 0.46
COL9A3-208ENST00000469802 CREMQ03060 361 aa17.93■□□□□ 0.46
COL9A3-208ENST00000469802 MTMR3Q13615 1198 aa17.93■□□□□ 0.46
COL9A3-208ENST00000469802 CYP26C1Q6V0L0 522 aa17.93■□□□□ 0.46
COL9A3-208ENST00000469802 UBALD2Q8IYN6 164 aa17.93■□□□□ 0.46
COL9A3-208ENST00000469802 FBXL6Q8N531 539 aa17.93■□□□□ 0.46
COL9A3-208ENST00000469802 RIN2Q8WYP3 895 aaPredicted RBP17.93■□□□□ 0.46
COL9A3-208ENST00000469802 ACO2Q99798 780 aaKnown RBP17.93■□□□□ 0.46
COL9A3-208ENST00000469802 TIPINQ9BVW5 301 aa17.93■□□□□ 0.46
COL9A3-208ENST00000469802 CDT1Q9H211 546 aa17.93■□□□□ 0.46
COL9A3-208ENST00000469802 DPP7Q9UHL4 492 aa17.93■□□□□ 0.46
COL9A3-208ENST00000469802 GDAQ9Y2T3 454 aa17.93■□□□□ 0.46
COL9A3-208ENST00000469802 MYH15Q9Y2K3 1946 aa17.92■□□□□ 0.46
COL9A3-208ENST00000469802 VWA3AA6NCI4 1184 aa17.92■□□□□ 0.46
COL9A3-208ENST00000469802 SPDYE4A6NLX3 237 aa17.92■□□□□ 0.46
COL9A3-208ENST00000469802 CCDC169A6NNP5 214 aa17.92■□□□□ 0.46
COL9A3-208ENST00000469802 TMEM189-UBE2V1I3L0A0 370 aa17.92■□□□□ 0.46
COL9A3-208ENST00000469802 TADA2AO75478 443 aa17.92■□□□□ 0.46
COL9A3-208ENST00000469802 PROZP22891 400 aa17.92■□□□□ 0.46
COL9A3-208ENST00000469802 GRM5P41594 1212 aa17.92■□□□□ 0.46
COL9A3-208ENST00000469802 TMEM119Q4V9L6 283 aa17.92■□□□□ 0.46
COL9A3-208ENST00000469802 LILRA6Q6PI73 481 aa17.92■□□□□ 0.46
COL9A3-208ENST00000469802 APBB1IPQ7Z5R6 666 aaPredicted RBP17.92■□□□□ 0.46
COL9A3-208ENST00000469802 ZBTB33Q86T24 672 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms