RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 EYA4O95677 639 aa7.49□□□□□ -1.21
PTCD3-208ENST00000469585 ASGR2P07307 311 aa7.49□□□□□ -1.21
PTCD3-208ENST00000469585 IL1R1P14778 569 aa7.49□□□□□ -1.21
PTCD3-208ENST00000469585 ATP2A2P16615 1042 aaKnown RBP7.49□□□□□ -1.21
PTCD3-208ENST00000469585 BPIP17213 487 aa7.49□□□□□ -1.21
PTCD3-208ENST00000469585 PTPN1P18031 435 aaKnown RBP7.49□□□□□ -1.21
PTCD3-208ENST00000469585 PMLP29590 882 aa7.49□□□□□ -1.21
PTCD3-208ENST00000469585 GYG1P46976 350 aa7.49□□□□□ -1.21
PTCD3-208ENST00000469585 FKBP1AP62942 108 aaKnown RBP7.49□□□□□ -1.21
PTCD3-208ENST00000469585 GSTO1P78417 241 aa7.49□□□□□ -1.21
PTCD3-208ENST00000469585 IRF9Q00978 393 aa7.49□□□□□ -1.21
PTCD3-208ENST00000469585 CT47A1Q5JQC4 288 aaPredicted RBP7.49□□□□□ -1.21
PTCD3-208ENST00000469585 CPZQ66K79 652 aa7.49□□□□□ -1.21
PTCD3-208ENST00000469585 DZIP1Q86YF9 867 aaKnown RBP7.49□□□□□ -1.21
PTCD3-208ENST00000469585 APOBEC3FQ8IUX4 373 aaKnown RBP7.49□□□□□ -1.21
PTCD3-208ENST00000469585 FAM126BQ8IXS8 530 aa7.49□□□□□ -1.21
PTCD3-208ENST00000469585 DLG3Q92796 817 aa7.49□□□□□ -1.21
PTCD3-208ENST00000469585 HOOK2Q96ED9 719 aa7.49□□□□□ -1.21
PTCD3-208ENST00000469585 KAZALD1Q96I82 304 aa7.49□□□□□ -1.21
PTCD3-208ENST00000469585 PUS3Q9BZE2 481 aaKnown RBP7.49□□□□□ -1.21
PTCD3-208ENST00000469585 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.49□□□□□ -1.21
PTCD3-208ENST00000469585 MYOZ2Q9NPC6 264 aa7.49□□□□□ -1.21
PTCD3-208ENST00000469585 PA2G4Q9UQ80 394 aaKnown RBP7.49□□□□□ -1.21
PTCD3-208ENST00000469585 ZKSCAN5Q9Y2L8 839 aa7.49□□□□□ -1.21
PTCD3-208ENST00000469585 TEX51A0A1B0GUA7 166 aa7.48□□□□□ -1.21
PTCD3-208ENST00000469585 A0A1B0GUL7 405 aa7.48□□□□□ -1.21
PTCD3-208ENST00000469585 YDJCA8MPS7 323 aa7.48□□□□□ -1.21
PTCD3-208ENST00000469585 ACOT7O00154 380 aa7.48□□□□□ -1.21
PTCD3-208ENST00000469585 SCDO00767 359 aa7.48□□□□□ -1.21
PTCD3-208ENST00000469585 GAS7O60861 476 aa7.48□□□□□ -1.21
PTCD3-208ENST00000469585 C4BPAP04003 597 aaKnown RBP7.48□□□□□ -1.21
PTCD3-208ENST00000469585 HSPA6P17066 643 aa7.48□□□□□ -1.21
PTCD3-208ENST00000469585 EPS15P42566 896 aa7.48□□□□□ -1.21
PTCD3-208ENST00000469585 CDR1P51861 262 aa7.48□□□□□ -1.21
PTCD3-208ENST00000469585 NFKB2Q00653 900 aa7.48□□□□□ -1.21
PTCD3-208ENST00000469585 TFCP2Q12800 502 aa7.48□□□□□ -1.21
PTCD3-208ENST00000469585 STRN3Q13033 797 aa7.48□□□□□ -1.21
PTCD3-208ENST00000469585 TBC1D10BQ4KMP7 808 aaPredicted RBP7.48□□□□□ -1.21
PTCD3-208ENST00000469585 CEP85Q6P2H3 762 aa7.48□□□□□ -1.21
PTCD3-208ENST00000469585 CNTROBQ8N137 903 aa7.48□□□□□ -1.21
PTCD3-208ENST00000469585 SSH3Q8TE77 659 aa7.48□□□□□ -1.21
PTCD3-208ENST00000469585 CPA5Q8WXQ8 436 aa7.48□□□□□ -1.21
PTCD3-208ENST00000469585 TEKT1Q969V4 418 aa7.48□□□□□ -1.21
PTCD3-208ENST00000469585 RWDD1Q9H446 243 aaPredicted RBP7.48□□□□□ -1.21
PTCD3-208ENST00000469585 GPR108Q9NPR9 543 aa7.48□□□□□ -1.21
PTCD3-208ENST00000469585 SIRT5Q9NXA8 310 aa7.48□□□□□ -1.21
PTCD3-208ENST00000469585 DTLQ9NZJ0 730 aa7.48□□□□□ -1.21
PTCD3-208ENST00000469585 HSPBP1Q9NZL4 362 aa7.48□□□□□ -1.21
PTCD3-208ENST00000469585 ABT1Q9ULW3 272 aaKnown RBP7.48□□□□□ -1.21
PTCD3-208ENST00000469585 PCDHA5Q9Y5H7 936 aa7.48□□□□□ -1.21
PTCD3-208ENST00000469585 B3GALT1Q9Y5Z6 326 aa7.48□□□□□ -1.21
PTCD3-208ENST00000469585 SNED1Q8TER0 1413 aa7.47□□□□□ -1.21
PTCD3-208ENST00000469585 PNMA6EA0A0J9YXQ4 647 aa7.47□□□□□ -1.21
PTCD3-208ENST00000469585 LRG1P02750 347 aa7.47□□□□□ -1.21
PTCD3-208ENST00000469585 LDHCP07864 332 aa7.47□□□□□ -1.21
PTCD3-208ENST00000469585 GJA4P35212 333 aa7.47□□□□□ -1.21
PTCD3-208ENST00000469585 ADCYAP1R1P41586 468 aa7.47□□□□□ -1.21
PTCD3-208ENST00000469585 PRELPP51888 382 aa7.47□□□□□ -1.21
PTCD3-208ENST00000469585 GRIN1Q05586 938 aa7.47□□□□□ -1.21
PTCD3-208ENST00000469585 TTF1Q15361 905 aaPredicted RBP7.47□□□□□ -1.21
PTCD3-208ENST00000469585 PAN2Q504Q3 1202 aaKnown RBP7.47□□□□□ -1.21
PTCD3-208ENST00000469585 BTBD8Q5XKL5 378 aa7.47□□□□□ -1.21
PTCD3-208ENST00000469585 ETV3LQ6ZN32 361 aa7.47□□□□□ -1.21
PTCD3-208ENST00000469585 EP400NLQ6ZTU2 488 aa7.47□□□□□ -1.21
PTCD3-208ENST00000469585 AACSQ86V21 672 aa7.47□□□□□ -1.21
PTCD3-208ENST00000469585 FBXO15Q8NCQ5 510 aaPredicted RBP7.47□□□□□ -1.21
PTCD3-208ENST00000469585 CHTF18Q8WVB6 975 aa7.47□□□□□ -1.21
PTCD3-208ENST00000469585 FAM84BQ96KN1 310 aaPredicted RBP7.47□□□□□ -1.21
PTCD3-208ENST00000469585 LRRCC1Q9C099 1032 aa7.47□□□□□ -1.21
PTCD3-208ENST00000469585 RNF38Q9H0F5 515 aa7.47□□□□□ -1.21
PTCD3-208ENST00000469585 GCM1Q9NP62 436 aa7.47□□□□□ -1.21
PTCD3-208ENST00000469585 ZBTB40Q9NUA8 1239 aa7.47□□□□□ -1.21
PTCD3-208ENST00000469585 ABCF2Q9UG63 623 aa7.47□□□□□ -1.21
PTCD3-208ENST00000469585 TNNQ9UQP3 1299 aa7.47□□□□□ -1.21
PTCD3-208ENST00000469585 ATP8A1Q9Y2Q0 1164 aa7.47□□□□□ -1.21
PTCD3-208ENST00000469585 DUOX1Q9NRD9 1551 aa7.46□□□□□ -1.21
PTCD3-208ENST00000469585 BUB1BO60566 1050 aaPredicted RBP7.46□□□□□ -1.22
PTCD3-208ENST00000469585 SEMA7AO75326 666 aa7.46□□□□□ -1.22
PTCD3-208ENST00000469585 KRT37O76014 449 aa7.46□□□□□ -1.22
PTCD3-208ENST00000469585 NCAM1P13591 858 aa7.46□□□□□ -1.22
PTCD3-208ENST00000469585 FAHP16930 419 aa7.46□□□□□ -1.22
PTCD3-208ENST00000469585 ECE1P42892 770 aa7.46□□□□□ -1.22
PTCD3-208ENST00000469585 RFX5P48382 616 aaPredicted RBP7.46□□□□□ -1.22
PTCD3-208ENST00000469585 CR1LQ2VPA4 569 aa7.46□□□□□ -1.22
PTCD3-208ENST00000469585 SUPT20HL1Q3ZLR7 823 aa7.46□□□□□ -1.22
PTCD3-208ENST00000469585 DACT2Q5SW24 774 aa7.46□□□□□ -1.22
PTCD3-208ENST00000469585 ATG9AQ7Z3C6 839 aa7.46□□□□□ -1.22
PTCD3-208ENST00000469585 DDX42Q86XP3 938 aaKnown RBP eCLIP7.46□□□□□ -1.22
PTCD3-208ENST00000469585 CERS3Q8IU89 383 aa7.46□□□□□ -1.22
PTCD3-208ENST00000469585 TDRD7Q8NHU6 1098 aaKnown RBP7.46□□□□□ -1.22
PTCD3-208ENST00000469585 USP7Q93009 1102 aa7.46□□□□□ -1.22
PTCD3-208ENST00000469585 TOE1Q96GM8 510 aaKnown RBP7.46□□□□□ -1.22
PTCD3-208ENST00000469585 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.46□□□□□ -1.221e-6■■■□□ 14.7
PTCD3-208ENST00000469585 VEZTQ9HBM0 779 aa7.46□□□□□ -1.22
PTCD3-208ENST00000469585 KCNH7Q9NS40 1196 aa7.46□□□□□ -1.22
PTCD3-208ENST00000469585 RIC8BQ9NVN3 520 aa7.46□□□□□ -1.22
PTCD3-208ENST00000469585 OXSMQ9NWU1 459 aa7.46□□□□□ -1.22
PTCD3-208ENST00000469585 THG1LQ9NWX6 298 aaKnown RBP7.46□□□□□ -1.22
PTCD3-208ENST00000469585 GGA3Q9NZ52 723 aa7.46□□□□□ -1.22
PTCD3-208ENST00000469585 RAI14Q9P0K7 980 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms