RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 PCSK4Q6UW60 755 aa6.12□□□□□ -1.43
VPS8-219ENST00000469479 RSPO2Q6UXX9 243 aaPredicted RBP6.12□□□□□ -1.43
VPS8-219ENST00000469479 DLK2Q6UY11 383 aa6.12□□□□□ -1.43
VPS8-219ENST00000469479 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.12□□□□□ -1.43
VPS8-219ENST00000469479 SCUBE1Q8IWY4 988 aa6.12□□□□□ -1.43
VPS8-219ENST00000469479 RBM12BQ8IXT5 1001 aaKnown RBP6.12□□□□□ -1.43
VPS8-219ENST00000469479 DDX60Q8IY21 1712 aaKnown RBP6.12□□□□□ -1.43
VPS8-219ENST00000469479 ULK2Q8IYT8 1036 aa6.12□□□□□ -1.43
VPS8-219ENST00000469479 PNISRQ8TF01 805 aaKnown RBP6.12□□□□□ -1.43
VPS8-219ENST00000469479 PRO3102Q9H379 93 aa6.12□□□□□ -1.43
VPS8-219ENST00000469479 PANK3Q9H999 370 aa6.12□□□□□ -1.43
VPS8-219ENST00000469479 DBNDD1Q9H9R9 158 aa6.12□□□□□ -1.43
VPS8-219ENST00000469479 COL1A1P02452 1464 aaPredicted RBP6.11□□□□□ -1.43
VPS8-219ENST00000469479 RTL9Q8NET4 1388 aa6.11□□□□□ -1.43
VPS8-219ENST00000469479 MYO3BQ8WXR4 1341 aa6.11□□□□□ -1.43
VPS8-219ENST00000469479 ARHGAP6O43182 974 aa6.11□□□□□ -1.43
VPS8-219ENST00000469479 PEX11BO96011 259 aa6.11□□□□□ -1.43
VPS8-219ENST00000469479 HSP90B1P14625 803 aaKnown RBP6.11□□□□□ -1.43
VPS8-219ENST00000469479 EPHA5P54756 1037 aa6.11□□□□□ -1.43
VPS8-219ENST00000469479 MAP4K2Q12851 820 aa6.11□□□□□ -1.43
VPS8-219ENST00000469479 FOXL1Q12952 345 aa6.11□□□□□ -1.43
VPS8-219ENST00000469479 KIF22Q14807 665 aa6.11□□□□□ -1.43
VPS8-219ENST00000469479 APOBEC3FQ8IUX4 373 aaKnown RBP6.11□□□□□ -1.43
VPS8-219ENST00000469479 KCTD13Q8WZ19 329 aa6.11□□□□□ -1.43
VPS8-219ENST00000469479 POLR3GLQ9BT43 218 aa6.11□□□□□ -1.43
VPS8-219ENST00000469479 NELFAQ9H3P2 528 aa6.11□□□□□ -1.43
VPS8-219ENST00000469479 MYOZ2Q9NPC6 264 aa6.11□□□□□ -1.43
VPS8-219ENST00000469479 TLR9Q9NR96 1032 aa6.11□□□□□ -1.43
VPS8-219ENST00000469479 PARPBPQ9NWS1 579 aa6.11□□□□□ -1.43
VPS8-219ENST00000469479 PUF60Q9UHX1 559 aaKnown RBP6.11□□□□□ -1.43
VPS8-219ENST00000469479 UNC80Q8N2C7 3258 aa6.11□□□□□ -1.43
VPS8-219ENST00000469479 BRCA2P51587 3418 aa6.11□□□□□ -1.43
VPS8-219ENST00000469479 SH3TC1Q8TE82 1336 aa6.1□□□□□ -1.43
VPS8-219ENST00000469479 MATN2O00339 956 aa6.1□□□□□ -1.43
VPS8-219ENST00000469479 KCNQ3O43525 872 aa6.1□□□□□ -1.43
VPS8-219ENST00000469479 SUSD5O60279 629 aa6.1□□□□□ -1.43
VPS8-219ENST00000469479 LTFP02788 710 aa6.1□□□□□ -1.43
VPS8-219ENST00000469479 NOLC1Q14978 699 aaKnown RBP eCLIP6.1□□□□□ -1.43
VPS8-219ENST00000469479 LRCH2Q5VUJ6 765 aa6.1□□□□□ -1.43
VPS8-219ENST00000469479 C6orf15Q6UXA7 325 aaPredicted RBP6.1□□□□□ -1.43
VPS8-219ENST00000469479 ZNF627Q7L945 461 aa6.1□□□□□ -1.43
VPS8-219ENST00000469479 ADGRE4PQ86SQ3 457 aa6.1□□□□□ -1.43
VPS8-219ENST00000469479 CD99L2Q8TCZ2 262 aa6.1□□□□□ -1.43
VPS8-219ENST00000469479 ANAPC16Q96DE5 110 aa6.1□□□□□ -1.43
VPS8-219ENST00000469479 CLIP3Q96DZ5 547 aa6.1□□□□□ -1.43
VPS8-219ENST00000469479 PLA2G3Q9NZ20 509 aa6.1□□□□□ -1.43
VPS8-219ENST00000469479 DSEQ9UL01 958 aa6.1□□□□□ -1.43
VPS8-219ENST00000469479 GIT1Q9Y2X7 761 aa6.1□□□□□ -1.43
VPS8-219ENST00000469479 REXO2Q9Y3B8 237 aaKnown RBP6.1□□□□□ -1.43
VPS8-219ENST00000469479 PPP2R3BQ9Y5P8 575 aa6.1□□□□□ -1.43
VPS8-219ENST00000469479 LRRC37AA6NMS7 1700 aa6.1□□□□□ -1.43
VPS8-219ENST00000469479 DUOX1Q9NRD9 1551 aa6.1□□□□□ -1.43
VPS8-219ENST00000469479 CAPNS1P04632 268 aa6.09□□□□□ -1.43
VPS8-219ENST00000469479 GNAT1P11488 350 aa6.09□□□□□ -1.43
VPS8-219ENST00000469479 MSX2P35548 267 aaPredicted RBP6.09□□□□□ -1.43
VPS8-219ENST00000469479 RRADP55042 308 aa6.09□□□□□ -1.43
VPS8-219ENST00000469479 CRHR2Q13324 411 aa6.09□□□□□ -1.43
VPS8-219ENST00000469479 TAF7Q15545 349 aaPredicted RBP6.09□□□□□ -1.43
VPS8-219ENST00000469479 MOB2Q70IA6 237 aa6.09□□□□□ -1.43
VPS8-219ENST00000469479 FAM178BQ8IXR5 827 aa6.09□□□□□ -1.43
VPS8-219ENST00000469479 DEFB123Q8N688 67 aa6.09□□□□□ -1.43
VPS8-219ENST00000469479 GMLQ99445 158 aa6.09□□□□□ -1.43
VPS8-219ENST00000469479 ZDHHC5Q9C0B5 715 aa6.09□□□□□ -1.43
VPS8-219ENST00000469479 R3HDMLQ9H3Y0 253 aa6.09□□□□□ -1.43
VPS8-219ENST00000469479 PODXL2Q9NZ53 605 aa6.09□□□□□ -1.43
VPS8-219ENST00000469479 TRMT112Q9UI30 125 aaKnown RBP6.09□□□□□ -1.43
VPS8-219ENST00000469479 FBXO10Q9UK96 956 aa6.09□□□□□ -1.43
VPS8-219ENST00000469479 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.09□□□□□ -1.43
VPS8-219ENST00000469479 RRP7AQ9Y3A4 280 aaKnown RBP6.09□□□□□ -1.43
VPS8-219ENST00000469479 LAMB4A4D0S4 1761 aa6.08□□□□□ -1.44
VPS8-219ENST00000469479 KDM3BQ7LBC6 1761 aa6.08□□□□□ -1.44
VPS8-219ENST00000469479 COL6A2P12110 1019 aa6.08□□□□□ -1.44
VPS8-219ENST00000469479 WDR72Q3MJ13 1102 aa6.08□□□□□ -1.44
VPS8-219ENST00000469479 SUPT20HL1Q3ZLR7 823 aa6.08□□□□□ -1.44
VPS8-219ENST00000469479 KCTD1Q719H9 257 aa6.08□□□□□ -1.44
VPS8-219ENST00000469479 SGMS1Q86VZ5 419 aa6.08□□□□□ -1.44
VPS8-219ENST00000469479 METTL16Q86W50 562 aaKnown RBP6.08□□□□□ -1.44
VPS8-219ENST00000469479 TMPRSS6Q8IU80 811 aa6.08□□□□□ -1.44
VPS8-219ENST00000469479 NGEFQ8N5V2 710 aa6.08□□□□□ -1.44
VPS8-219ENST00000469479 TBC1D16Q8TBP0 767 aa6.08□□□□□ -1.44
VPS8-219ENST00000469479 WNK4Q96J92 1243 aa6.08□□□□□ -1.44
VPS8-219ENST00000469479 CFAP53Q96M91 514 aa6.08□□□□□ -1.44
VPS8-219ENST00000469479 ZCCHC17Q9NP64 241 aaKnown RBP6.08□□□□□ -1.44
VPS8-219ENST00000469479 CEP72Q9P209 647 aa6.08□□□□□ -1.44
VPS8-219ENST00000469479 PPARGC1AQ9UBK2 798 aaKnown RBP6.08□□□□□ -1.44
VPS8-219ENST00000469479 POLLQ9UGP5 575 aa6.08□□□□□ -1.44
VPS8-219ENST00000469479 TELO2Q9Y4R8 837 aa6.08□□□□□ -1.44
VPS8-219ENST00000469479 PTCH2Q9Y6C5 1203 aa6.08□□□□□ -1.44
VPS8-219ENST00000469479 ANKRD36CQ5JPF3 1778 aa6.08□□□□□ -1.44
VPS8-219ENST00000469479 LAMA3Q16787 3333 aa6.07□□□□□ -1.44
VPS8-219ENST00000469479 ASTN2O75129 1339 aaPredicted RBP6.07□□□□□ -1.44
VPS8-219ENST00000469479 TMEM191CA6NGB0 347 aa6.07□□□□□ -1.44
VPS8-219ENST00000469479 ACOT7O00154 380 aa6.07□□□□□ -1.44
VPS8-219ENST00000469479 AGRPO00253 132 aa6.07□□□□□ -1.44
VPS8-219ENST00000469479 MSCO60682 206 aa6.07□□□□□ -1.44
VPS8-219ENST00000469479 GJB1P08034 283 aa6.07□□□□□ -1.44
VPS8-219ENST00000469479 MYL6BP14649 208 aa6.07□□□□□ -1.44
VPS8-219ENST00000469479 GRK2P25098 689 aa6.07□□□□□ -1.44
VPS8-219ENST00000469479 HOXD10P28358 340 aa6.07□□□□□ -1.44
VPS8-219ENST00000469479 GRK3P35626 688 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms