RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 hCG_2014768A0A024R1R8 64 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 CCDC162PA2VCL2 907 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 A6NJR5 290 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 OPHN1O60890 802 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 DNAJC6O75061 913 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 TTC4O95801 387 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 ANPEPP15144 967 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 CEBPAP49715 358 aaPredicted RBP9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 ARHGAP4P98171 946 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 CDC16Q13042 620 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 STAT4Q14765 748 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 TXNRD1Q16881 649 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 CERKLQ49MI3 558 aaPredicted RBP9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 PDCD4Q53EL6 469 aaKnown RBP9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 MAP3K21Q5TCX8 1036 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 FAM91A1Q658Y4 838 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 NET1Q7Z628 596 aaPredicted RBP9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 ZBED8Q8IZ13 594 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 ATP11CQ8NB49 1132 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 FNDC8Q8TC99 324 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 SLCO2A1Q92959 643 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 NSL1Q96IY1 281 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 TTC25Q96NG3 672 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 PLIN2Q99541 437 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 METTL5Q9NRN9 209 aaKnown RBP9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 EMILIN3Q9NT22 766 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 TYW1Q9NV66 732 aaKnown RBP9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 UTP6Q9NYH9 597 aaKnown RBP9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 PLK2Q9NYY3 685 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 TMOD4Q9NZQ9 345 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 THEGQ9P2T0 379 aa9.62□□□□□ -0.87
SMARCE1-207ENST00000469334 TNRQ92752 1358 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 hCG_1642624A0A1W2PR95 340 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 TMEM247A6NEH6 219 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 NBPF26B4DH59 902 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 RNASEH1O60930 286 aaKnown RBP9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 CBFA2T3O75081 653 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 FKBP6O75344 327 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 OR52Z1P0C646 297 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 HOXD12P35452 270 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 HADHBP55084 474 aaKnown RBP9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 PLCB3Q01970 1234 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 MED21Q13503 144 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 UBAP2Q5T6F2 1119 aaKnown RBP9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 GRAMD4Q6IC98 578 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 PROSER2Q86WR7 435 aaPredicted RBP9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 ZC3H3Q8IXZ2 948 aaKnown RBP9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 MYOCDQ8IZQ8 938 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 UBL4BQ8N7F7 174 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 C12orf50Q8NA57 414 aaPredicted RBP9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 DQX1Q8TE96 717 aaKnown RBP9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 GAB3Q8WWW8 586 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 DDX12PQ92771 950 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 C18orf8Q96DM3 657 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 ZNF496Q96IT1 587 aaPredicted RBP9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 ZFRQ96KR1 1074 aaKnown RBP9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 SIKE1Q9BRV8 207 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 TSPYL2Q9H2G4 693 aaPredicted RBP9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 ARHGAP10A1A4S6 786 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 M0R2N6 131 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 CIB2O75838 187 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 CDK4P11802 303 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 HARSP12081 509 aaKnown RBP9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 LMNB1P20700 586 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 RPL5P46777 297 aaKnown RBP9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 EMP3P54852 163 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 WDR4P57081 412 aaKnown RBP9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 DNAJC3Q13217 504 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 SH3D19Q5HYK7 790 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 CCDC62Q6P9F0 684 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 AAGABQ6PD74 315 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 CCDC137Q6PK04 289 aaKnown RBP9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 SYDE1Q6ZW31 735 aaPredicted RBP9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 SRRM1Q8IYB3 904 aaKnown RBP9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 TTC5Q8N0Z6 440 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 PRELID2Q8N945 189 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 DTX3LQ8TDB6 740 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 DENND1AQ8TEH3 1009 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 NMD3Q96D46 503 aaKnown RBP9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 ITPKCQ96DU7 683 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 PLA2G12BQ9BX93 195 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 ARMT1Q9H993 441 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 MTUS1Q9ULD2 1270 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 PPP1R9AQ9ULJ8 1098 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 DMTF1Q9Y222 760 aa9.61□□□□□ -0.87
SMARCE1-207ENST00000469334 KAT6BQ8WYB5 2073 aa9.6□□□□□ -0.87
SMARCE1-207ENST00000469334 FAM205AQ6ZU69 1335 aa9.6□□□□□ -0.87
SMARCE1-207ENST00000469334 A0A1W2PRG0 241 aa9.6□□□□□ -0.87
SMARCE1-207ENST00000469334 KANSL1LA0AUZ9 987 aa9.6□□□□□ -0.87
SMARCE1-207ENST00000469334 TMEM110-MUSTN1A8MSY1 372 aa9.6□□□□□ -0.87
SMARCE1-207ENST00000469334 TRAF5O00463 557 aa9.6□□□□□ -0.87
SMARCE1-207ENST00000469334 ACSL3O95573 720 aa9.6□□□□□ -0.87
SMARCE1-207ENST00000469334 UQCRBP14927 111 aa9.6□□□□□ -0.87
SMARCE1-207ENST00000469334 ITIH2P19823 946 aa9.6□□□□□ -0.87
SMARCE1-207ENST00000469334 GTF2H1P32780 548 aa9.6□□□□□ -0.87
SMARCE1-207ENST00000469334 THOC5Q13769 683 aaKnown RBP9.6□□□□□ -0.87
SMARCE1-207ENST00000469334 METTL24Q5JXM2 366 aa9.6□□□□□ -0.87
SMARCE1-207ENST00000469334 SEL1L2Q5TEA6 688 aa9.6□□□□□ -0.87
SMARCE1-207ENST00000469334 TMCO4Q5TGY1 634 aa9.6□□□□□ -0.87
SMARCE1-207ENST00000469334 C11orf63Q6NUN7 778 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms