RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 ACKR2O00590 384 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 FAM228BP0C875 321 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 SRGAP2CP0DJJ0 459 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 PIK3CAP42336 1068 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 CLCN3P51790 818 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 NLRP11P59045 1033 aaKnown RBP10.09□□□□□ -0.79
SMC1A-205ENST00000469129 IGBP1P78318 339 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 POU5F1Q01860 360 aaKnown RBP10.09□□□□□ -0.79
SMC1A-205ENST00000469129 GCNT1Q02742 428 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 MCL1Q07820 350 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 MKRN4PQ13434 485 aaPredicted RBP10.09□□□□□ -0.79
SMC1A-205ENST00000469129 DRP2Q13474 957 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 PRPF4BQ13523 1007 aaKnown RBP10.09□□□□□ -0.79
SMC1A-205ENST00000469129 GRIK4Q16099 956 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 ENOX2Q16206 610 aaKnown RBP10.09□□□□□ -0.79
SMC1A-205ENST00000469129 ARHGAP44Q17R89 818 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 ZNF568Q3ZCX4 644 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 WDR44Q5JSH3 913 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 GJC2Q5T442 439 aaPredicted RBP10.09□□□□□ -0.79
SMC1A-205ENST00000469129 PHLDB3Q6NSJ2 640 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 ALKBH5Q6P6C2 394 aaKnown RBP10.09□□□□□ -0.79
SMC1A-205ENST00000469129 GJB7Q6PEY0 223 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 TSHZ1Q6ZSZ6 1077 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 ZNF571Q7Z3V5 609 aaPredicted RBP10.09□□□□□ -0.79
SMC1A-205ENST00000469129 TLK2Q86UE8 772 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 ZNF410Q86VK4 478 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 WDR49Q8IV35 697 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 PPM1KQ8N3J5 372 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 LINC01465Q8N7H1 131 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 ZSWIM2Q8NEG5 633 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 TRAPPC12Q8WVT3 735 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 ATRIPQ8WXE1 791 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 USP6NLQ92738 828 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 RPGRIP1Q96KN7 1286 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 CALR3Q96L12 384 aaKnown RBP10.09□□□□□ -0.79
SMC1A-205ENST00000469129 NLRP4Q96MN2 994 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 ACO2Q99798 780 aaKnown RBP10.09□□□□□ -0.79
SMC1A-205ENST00000469129 C16orf70Q9BSU1 422 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 TCHPQ9BT92 498 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 KATNAL1Q9BW62 490 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 INO80BQ9C086 356 aaPredicted RBP10.09□□□□□ -0.79
SMC1A-205ENST00000469129 LACRTQ9GZZ8 138 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 AP5M1Q9H0R1 490 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 FZD8Q9H461 694 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 RAB20Q9NX57 234 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 TRIM10Q9UDY6 481 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 ADAMTS1Q9UHI8 967 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 AJAP1Q9UKB5 411 aaPredicted RBP10.09□□□□□ -0.79
SMC1A-205ENST00000469129 AKT3Q9Y243 479 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 JRKLQ9Y4A0 524 aa10.09□□□□□ -0.79
SMC1A-205ENST00000469129 RCCD1A6NED2 376 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 A6NJR5 290 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 FANCGO15287 622 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 CA12O43570 354 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 IL18RAPO95256 599 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 H2AFZP0C0S5 128 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 HSPA8P11142 646 aaKnown RBP10.08□□□□□ -0.8
SMC1A-205ENST00000469129 PROZP22891 400 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 TBXAS1P24557 533 aaPredicted RBP10.08□□□□□ -0.8
SMC1A-205ENST00000469129 KLRC1P26715 233 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 TM4SF4P48230 202 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 PDE6CP51160 858 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 FCGRTP55899 365 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 MBTD1Q05BQ5 628 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 CRHR2Q13324 411 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 BIRC3Q13489 604 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 KIAA0753Q2KHM9 967 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 ZACNQ401N2 412 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 ATF7IP2Q5U623 682 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 PAPD7Q5XG87 772 aaKnown RBP10.08□□□□□ -0.8
SMC1A-205ENST00000469129 MTHFD1LQ6UB35 978 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 C15orf39Q6ZRI6 1047 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 H2AFVQ71UI9 128 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 SV2AQ7L0J3 742 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 SRGAP1Q7Z6B7 1085 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 ARHGEF19Q8IW93 802 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 REM2Q8IYK8 340 aaPredicted RBP10.08□□□□□ -0.8
SMC1A-205ENST00000469129 TAS1R2Q8TE23 839 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 SHC3Q92529 594 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 UBXN4Q92575 508 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 DHX38Q92620 1227 aaKnown RBP10.08□□□□□ -0.8
SMC1A-205ENST00000469129 GOLGA1Q92805 767 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 SCLT1Q96NL6 688 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 GPR88Q9GZN0 384 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 RNPEPQ9H4A4 650 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 NAGPAQ9UK23 515 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 NENFQ9UMX5 172 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 TNFSF13BQ9Y275 285 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 HYOU1Q9Y4L1 999 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 SAR1BQ9Y6B6 198 aa10.08□□□□□ -0.8
SMC1A-205ENST00000469129 TRIP12Q14669 1992 aaPredicted RBP10.08□□□□□ -0.8
SMC1A-205ENST00000469129 NCANO14594 1321 aa10.07□□□□□ -0.8
SMC1A-205ENST00000469129 NRCAMQ92823 1304 aa10.07□□□□□ -0.8
SMC1A-205ENST00000469129 TRIP11Q15643 1979 aa10.07□□□□□ -0.8
SMC1A-205ENST00000469129 SCN10AQ9Y5Y9 1956 aa10.07□□□□□ -0.8
SMC1A-205ENST00000469129 LRRN2O75325 713 aa10.07□□□□□ -0.8
SMC1A-205ENST00000469129 TADA3O75528 432 aa10.07□□□□□ -0.8
SMC1A-205ENST00000469129 MOCS3O95396 460 aa10.07□□□□□ -0.8
SMC1A-205ENST00000469129 F2P00734 622 aa10.07□□□□□ -0.8
SMC1A-205ENST00000469129 HLA-DRAP01903 254 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms