RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 FAN1Q9Y2M0 1017 aa15.9■□□□□ 0.14
COL27A1-203ENST00000468565 IRAK3Q9Y616 596 aa15.9■□□□□ 0.14
COL27A1-203ENST00000468565 CCDC169A6NNP5 214 aa15.89■□□□□ 0.13
COL27A1-203ENST00000468565 HIDE1A8MVS5 230 aa15.89■□□□□ 0.13
COL27A1-203ENST00000468565 PER2O15055 1255 aa15.89■□□□□ 0.13
COL27A1-203ENST00000468565 SSBP05455 408 aaKnown RBP eCLIP15.89■□□□□ 0.13
COL27A1-203ENST00000468565 LIG1P18858 919 aa15.89■□□□□ 0.13
COL27A1-203ENST00000468565 AKAP5P24588 427 aa15.89■□□□□ 0.13
COL27A1-203ENST00000468565 SCNN1GP51170 649 aa15.89■□□□□ 0.13
COL27A1-203ENST00000468565 COASYQ13057 564 aa15.89■□□□□ 0.13
COL27A1-203ENST00000468565 SMAD4Q13485 552 aaKnown RBP15.89■□□□□ 0.13
COL27A1-203ENST00000468565 GIT2Q14161 759 aa15.89■□□□□ 0.13
COL27A1-203ENST00000468565 TMEM184AQ6ZMB5 413 aa15.89■□□□□ 0.13
COL27A1-203ENST00000468565 FAM178BQ8IXR5 827 aa15.89■□□□□ 0.13
COL27A1-203ENST00000468565 VPS52Q8N1B4 723 aa15.89■□□□□ 0.13
COL27A1-203ENST00000468565 GSTCDQ8NEC7 633 aa15.89■□□□□ 0.13
COL27A1-203ENST00000468565 SPIRE2Q8WWL2 714 aa15.89■□□□□ 0.13
COL27A1-203ENST00000468565 NTPCRQ9BSD7 190 aaKnown RBP15.89■□□□□ 0.13
COL27A1-203ENST00000468565 CCSER1Q9C0I3 900 aa15.89■□□□□ 0.13
COL27A1-203ENST00000468565 KMT5AQ9NQR1 393 aa15.89■□□□□ 0.13
COL27A1-203ENST00000468565 MIOSQ9NXC5 875 aa15.89■□□□□ 0.13
COL27A1-203ENST00000468565 CFAP45Q9UL16 551 aa15.89■□□□□ 0.13
COL27A1-203ENST00000468565 PDCD11Q14690 1871 aaKnown RBP15.89■□□□□ 0.13
COL27A1-203ENST00000468565 C2orf71A6NGG8 1288 aa15.88■□□□□ 0.13
COL27A1-203ENST00000468565 NRP1O14786 923 aa15.88■□□□□ 0.13
COL27A1-203ENST00000468565 MBTPS2O43462 519 aa15.88■□□□□ 0.13
COL27A1-203ENST00000468565 SRGAP2BP0DMP2 458 aa15.88■□□□□ 0.13
COL27A1-203ENST00000468565 CTSAP10619 480 aa15.88■□□□□ 0.13
COL27A1-203ENST00000468565 GRIK3Q13003 919 aa15.88■□□□□ 0.13
COL27A1-203ENST00000468565 KCNC3Q14003 757 aa15.88■□□□□ 0.13
COL27A1-203ENST00000468565 NT5DC1Q5TFE4 455 aa15.88■□□□□ 0.13
COL27A1-203ENST00000468565 ATF7IP2Q5U623 682 aa15.88■□□□□ 0.13
COL27A1-203ENST00000468565 FAM173BQ6P4H8 233 aa15.88■□□□□ 0.13
COL27A1-203ENST00000468565 APBB1IPQ7Z5R6 666 aaPredicted RBP15.88■□□□□ 0.13
COL27A1-203ENST00000468565 ZSCAN30Q86W11 494 aa15.88■□□□□ 0.13
COL27A1-203ENST00000468565 LEO1Q8WVC0 666 aaPredicted RBP15.88■□□□□ 0.13
COL27A1-203ENST00000468565 PARP2Q9UGN5 583 aa15.88■□□□□ 0.13
COL27A1-203ENST00000468565 TNFSF13BQ9Y275 285 aa15.88■□□□□ 0.13
COL27A1-203ENST00000468565 BDP1A6H8Y1 2624 aa15.88■□□□□ 0.13
COL27A1-203ENST00000468565 PLS3P13797 630 aa15.88■□□□□ 0.13
COL27A1-203ENST00000468565 EEF1DP3Q658K8 133 aa15.88■□□□□ 0.13
COL27A1-203ENST00000468565 VN1R2Q8NFZ6 395 aa15.88■□□□□ 0.13
COL27A1-203ENST00000468565 RPS6KC1Q96S38 1066 aa15.88■□□□□ 0.13
COL27A1-203ENST00000468565 VN1R3Q9BXE9 311 aa15.88■□□□□ 0.13
COL27A1-203ENST00000468565 MRPL4Q9BYD3 311 aaKnown RBP15.88■□□□□ 0.13
COL27A1-203ENST00000468565 BLOC1S4Q9NUP1 217 aa15.88■□□□□ 0.13
COL27A1-203ENST00000468565 SNTG2Q9NY99 539 aa15.88■□□□□ 0.13
COL27A1-203ENST00000468565 TFIP11Q9UBB9 837 aaKnown RBP15.88■□□□□ 0.13
COL27A1-203ENST00000468565 PRKAG3Q9UGI9 489 aa15.88■□□□□ 0.13
COL27A1-203ENST00000468565 FBXO2Q9UK22 296 aaPredicted RBP15.88■□□□□ 0.13
COL27A1-203ENST00000468565 ODF2LQ9ULJ1 636 aa15.88■□□□□ 0.13
COL27A1-203ENST00000468565 SRPRBQ9Y5M8 271 aaKnown RBP15.88■□□□□ 0.13
COL27A1-203ENST00000468565 NR1I2O75469 434 aa15.87■□□□□ 0.13
COL27A1-203ENST00000468565 PLCG1P19174 1290 aa15.87■□□□□ 0.13
COL27A1-203ENST00000468565 KARSQ15046 597 aaKnown RBP15.87■□□□□ 0.13
COL27A1-203ENST00000468565 SMAD2Q15796 467 aaKnown RBP15.87■□□□□ 0.13
COL27A1-203ENST00000468565 CLUL1Q15846 466 aa15.87■□□□□ 0.13
COL27A1-203ENST00000468565 ATL3Q6DD88 541 aa15.87■□□□□ 0.13
COL27A1-203ENST00000468565 SMRP1Q8NCR6 262 aa15.87■□□□□ 0.13
COL27A1-203ENST00000468565 RASSF8Q8NHQ8 419 aa15.87■□□□□ 0.13
COL27A1-203ENST00000468565 LRRC15Q8TF66 581 aa15.87■□□□□ 0.13
COL27A1-203ENST00000468565 MARCH5Q9NX47 278 aa15.87■□□□□ 0.13
COL27A1-203ENST00000468565 BARX2Q9UMQ3 279 aaPredicted RBP15.87■□□□□ 0.13
COL27A1-203ENST00000468565 USP20Q9Y2K6 914 aa15.87■□□□□ 0.13
COL27A1-203ENST00000468565 SFI1A8K8P3 1242 aa15.86■□□□□ 0.13
COL27A1-203ENST00000468565 CXCL14O95715 111 aa15.86■□□□□ 0.13
COL27A1-203ENST00000468565 MARCKSP29966 332 aaPredicted RBP15.86■□□□□ 0.13
COL27A1-203ENST00000468565 OR1G1P47890 313 aa15.86■□□□□ 0.13
COL27A1-203ENST00000468565 SMTNP53814 917 aa15.86■□□□□ 0.13
COL27A1-203ENST00000468565 RAD51AP2Q09MP3 1159 aa15.86■□□□□ 0.13
COL27A1-203ENST00000468565 ARSHQ5FYA8 562 aa15.86■□□□□ 0.13
COL27A1-203ENST00000468565 TAS1R3Q7RTX0 852 aa15.86■□□□□ 0.13
COL27A1-203ENST00000468565 RAD54LQ92698 747 aa15.86■□□□□ 0.13
COL27A1-203ENST00000468565 KCNN1Q92952 543 aa15.86■□□□□ 0.13
COL27A1-203ENST00000468565 USP28Q96RU2 1077 aa15.86■□□□□ 0.13
COL27A1-203ENST00000468565 ACO2Q99798 780 aaKnown RBP15.86■□□□□ 0.13
COL27A1-203ENST00000468565 NUP62CLQ9H1M0 184 aa15.86■□□□□ 0.13
COL27A1-203ENST00000468565 KLK14Q9P0G3 267 aa15.86■□□□□ 0.13
COL27A1-203ENST00000468565 LARSQ9P2J5 1176 aaKnown RBP15.86■□□□□ 0.13
COL27A1-203ENST00000468565 MTCL1Q9Y4B5 1905 aaKnown RBP15.86■□□□□ 0.13
COL27A1-203ENST00000468565 SLC16A4O15374 487 aa15.86■□□□□ 0.13
COL27A1-203ENST00000468565 RECQL4O94761 1208 aa15.86■□□□□ 0.13
COL27A1-203ENST00000468565 SLC39A14Q15043 492 aa15.86■□□□□ 0.13
COL27A1-203ENST00000468565 GPBP1Q86WP2 473 aa15.86■□□□□ 0.13
COL27A1-203ENST00000468565 RNF168Q8IYW5 571 aaPredicted RBP15.86■□□□□ 0.13
COL27A1-203ENST00000468565 LARP4BQ92615 738 aaKnown RBP15.86■□□□□ 0.13
COL27A1-203ENST00000468565 CASP10Q92851 521 aa15.86■□□□□ 0.13
COL27A1-203ENST00000468565 ZNF396Q96N95 335 aaPredicted RBP15.86■□□□□ 0.13
COL27A1-203ENST00000468565 HERC2P3Q9BVR0 1158 aa15.86■□□□□ 0.13
COL27A1-203ENST00000468565 COLEC11Q9BWP8 271 aa15.86■□□□□ 0.13
COL27A1-203ENST00000468565 PTPRHQ9HD43 1115 aa15.86■□□□□ 0.13
COL27A1-203ENST00000468565 CCDC39Q9UFE4 941 aa15.86■□□□□ 0.13
COL27A1-203ENST00000468565 PRG3Q9Y2Y8 225 aaPredicted RBP15.86■□□□□ 0.13
COL27A1-203ENST00000468565 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.85■□□□□ 0.13
COL27A1-203ENST00000468565 H0YCG3 227 aa15.85■□□□□ 0.13
COL27A1-203ENST00000468565 CLASP2O75122 1294 aaKnown RBP15.85■□□□□ 0.13
COL27A1-203ENST00000468565 EFEMP2O95967 443 aa15.85■□□□□ 0.13
COL27A1-203ENST00000468565 SOD2P04179 222 aa15.85■□□□□ 0.13
COL27A1-203ENST00000468565 MSNP26038 577 aaKnown RBP15.85■□□□□ 0.13
COL27A1-203ENST00000468565 CEBPZQ03701 1054 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms