RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 GOLGB1Q14789 3259 aaKnown RBP4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 MYH8P13535 1937 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 SSU72P8A0A1W2PR75 194 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 NOP56O00567 594 aaKnown RBP4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 CXCL11O14625 94 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 ZBED4O75132 1171 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 TOMM70O94826 608 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 ITGAVP06756 1048 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 SNHG28P0DPA3 235 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 SCG2P13521 617 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 VAV1P15498 845 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 XBP1P17861 261 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 PDCP20941 246 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 STAT2P52630 851 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 RCAN1P53805 252 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 NAPAP54920 295 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 GP2P55259 537 aaKnown RBP4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 POU4F1Q01851 419 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 IFRD2Q12894 506 aaPredicted RBP4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 PPIL2Q13356 520 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 PLS1Q14651 629 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 BMS1Q14692 1282 aaKnown RBP4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 SAFBQ15424 915 aaKnown RBP eCLIP4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 PKN1Q16512 942 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 CDC37Q16543 378 aaPredicted RBP4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 SLC35G1Q2M3R5 365 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 QRICH1Q2TAL8 776 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 USH1GQ495M9 461 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 MTERF2Q49AM1 385 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 TREML2Q5T2D2 321 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 KRT40Q6A162 431 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 FAM173BQ6P4H8 233 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 FAM160B2Q86V87 743 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 ZNF227Q86WZ6 799 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 TRIM59Q8IWR1 403 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 LRRN4CLQ8ND94 238 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 SGSM3Q96HU1 749 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 WNK4Q96J92 1243 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 CHAMP1Q96JM3 812 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 MRGPRX3Q96LB0 322 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 ALPK1Q96QP1 1244 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 P2RX7Q99572 595 aaKnown RBP4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 SLF1Q9BQI6 1058 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 RNF26Q9BY78 433 aaPredicted RBP4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 KIAA1683Q9H0B3 1180 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 RIOX1Q9H6W3 641 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 FEM1BQ9UK73 627 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 MTMR6Q9Y217 621 aa4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 WDR33Q9C0J8 1336 aaKnown RBP4.66□□□□□ -1.66
TMEM39A-204ENST00000468545 CCL15-CCL14A0A0B4J2E2 113 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 TMEM82A0PJX8 343 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 FAM221BA6H8Z2 402 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 SMCO2A6NFE2 343 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 BTBD18B2RXH4 712 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 ZBTB5O15062 677 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 WDR46O15213 610 aaKnown RBP4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 PEX10O60683 326 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 CD3EP07766 207 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 ZSCAN22P10073 491 aaPredicted RBP4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 VCAM1P19320 739 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 NCLP19338 710 aaKnown RBP4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 SMARCA1P28370 1054 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 NOP2P46087 812 aaKnown RBP4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 FKBP1BP68106 108 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 IRX3P78415 501 aaPredicted RBP4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 AMPD2Q01433 879 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 CEBPZQ03701 1054 aaKnown RBP4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 SNAPC2Q13487 334 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 COG2Q14746 738 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 CCL15Q16663 113 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 PFKFB3Q16875 520 aaPredicted RBP4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 JAKMIP3Q5VZ66 844 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 WWC2Q6AWC2 1192 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 RGMBQ6NW40 437 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 CATSPERGQ6ZRH7 1159 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 FASTKD5Q7L8L6 764 aaKnown RBP4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 PRPF38AQ8NAV1 312 aaKnown RBP4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 FBXO18Q8NFZ0 1043 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 LPAR1Q92633 364 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 TNPO1Q92973 898 aaKnown RBP4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 CCDC120Q96HB5 630 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 MRFAP1L1Q96HT8 127 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 PAGR1Q9BTK6 254 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 SPZ1Q9BXG8 430 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 SLC12A9Q9BXP2 914 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 RAVER2Q9HCJ3 691 aaKnown RBP4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 C6orf50Q9HD87 102 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 HOXC10Q9NYD6 342 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 SLAMF8Q9P0V8 285 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 ZNF281Q9Y2X9 895 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 ZDHHC9Q9Y397 364 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 PCDHA1Q9Y5I3 950 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 STK36Q9NRP7 1315 aa4.65□□□□□ -1.67
TMEM39A-204ENST00000468545 MYH4Q9Y623 1939 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 UTRNP46939 3433 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 A0A0G2JLL6 359 aaPredicted RBP4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 A0A1W2PQU0 124 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 KIF28PB7ZC32 967 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 STXBP3O00186 592 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 ADAMTS3O15072 1205 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms