RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 KLC4Q9NSK0 619 aa16.95■□□□□ 0.3
TSPAN4-211ENST00000468468 PTPN22Q9Y2R2 807 aa16.95■□□□□ 0.3
TSPAN4-211ENST00000468468 PCDHA3Q9Y5H8 950 aa16.95■□□□□ 0.3
TSPAN4-211ENST00000468468 CCDC189A1A4V9 331 aa16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 MMEP08473 750 aa16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 GZMAP12544 262 aa16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 ALAS1P13196 640 aa16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 SCP2P22307 547 aa16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 FGFR4P22455 802 aa16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 MMP13P45452 471 aa16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 RARRES1P49788 294 aa16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 TNIP1Q15025 636 aa16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 C6orf118Q5T5N4 469 aa16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 FAM160B2Q86V87 743 aa16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 SLC47A2Q86VL8 602 aa16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 FAM71AQ8IYT1 594 aa16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 ZNF564Q8TBZ8 553 aaPredicted RBP16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 CD101Q93033 1021 aa16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 NUP85Q9BW27 656 aa16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 CNOT7Q9UIV1 285 aaKnown RBP16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 FEM1BQ9UK73 627 aa16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 MTUS1Q9ULD2 1270 aa16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 ATP2C2O75185 946 aa16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 RASSF9O75901 435 aa16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 MTA2O94776 668 aa16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 COILP38432 576 aaPredicted RBP16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 MAP2K1Q02750 393 aaPredicted RBP16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 TBC1D10BQ4KMP7 808 aaPredicted RBP16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 CHADLQ6NUI6 762 aa16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 SLC13A5Q86YT5 568 aaPredicted RBP16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 KREMEN1Q96MU8 473 aa16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 ANKRD63C9JTQ0 380 aa16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 KCNJ1P48048 391 aa16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 SATB1Q01826 763 aa16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 ADCY2Q08462 1091 aa16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 TRMT1LQ7Z2T5 733 aaKnown RBP16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 ADAM7Q9H2U9 754 aa16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 DBR1Q9UK59 544 aaKnown RBP16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 GJA3Q9Y6H8 435 aa16.94■□□□□ 0.3
TSPAN4-211ENST00000468468 SLC16A4O15374 487 aa16.93■□□□□ 0.3
TSPAN4-211ENST00000468468 RARAP10276 462 aa16.93■□□□□ 0.3
TSPAN4-211ENST00000468468 MICALL2Q8IY33 904 aa16.93■□□□□ 0.3
TSPAN4-211ENST00000468468 IL31RAQ8NI17 732 aa16.93■□□□□ 0.3
TSPAN4-211ENST00000468468 EPS8L3Q8TE67 593 aaKnown RBP16.93■□□□□ 0.3
TSPAN4-211ENST00000468468 TMEM174Q8WUU8 243 aa16.93■□□□□ 0.3
TSPAN4-211ENST00000468468 ATXN2LQ8WWM7 1075 aaKnown RBP16.93■□□□□ 0.3
TSPAN4-211ENST00000468468 ZNF653Q96CK0 615 aa16.93■□□□□ 0.3
TSPAN4-211ENST00000468468 ZNF317Q96PQ6 595 aaPredicted RBP16.93■□□□□ 0.3
TSPAN4-211ENST00000468468 DHX15O43143 795 aaKnown RBP16.93■□□□□ 0.3
TSPAN4-211ENST00000468468 PLA2G6O60733 806 aa16.93■□□□□ 0.3
TSPAN4-211ENST00000468468 AGTP01019 485 aa16.93■□□□□ 0.3
TSPAN4-211ENST00000468468 ADRB2P07550 413 aa16.93■□□□□ 0.3
TSPAN4-211ENST00000468468 SLCO1A2P46721 670 aa16.93■□□□□ 0.3
TSPAN4-211ENST00000468468 GMPSP49915 693 aaPredicted RBP16.93■□□□□ 0.3
TSPAN4-211ENST00000468468 MFAP3P55082 362 aa16.93■□□□□ 0.3
TSPAN4-211ENST00000468468 ZNF280AP59817 542 aaPredicted RBP16.93■□□□□ 0.3
TSPAN4-211ENST00000468468 GTF2BQ00403 316 aa16.93■□□□□ 0.3
TSPAN4-211ENST00000468468 FMO1Q01740 532 aa16.93■□□□□ 0.3
TSPAN4-211ENST00000468468 SLMAPQ14BN4 828 aa16.93■□□□□ 0.3
TSPAN4-211ENST00000468468 CYP1B1Q16678 543 aa16.93■□□□□ 0.3
TSPAN4-211ENST00000468468 COL20A1Q9P218 1284 aa16.93■□□□□ 0.3
TSPAN4-211ENST00000468468 CCPG1Q9ULG6 757 aa16.93■□□□□ 0.3
TSPAN4-211ENST00000468468 FER1L6Q2WGJ9 1857 aa16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 TMEM150BA6NC51 233 aa16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 RIPK2O43353 540 aa16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 CYP1A2P05177 515 aa16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 PTGER2P43116 358 aa16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 QARSP47897 775 aaKnown RBP16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 PEX3P56589 373 aa16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 LACTB2Q53H82 288 aaPredicted RBP16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 CROCCP2Q86T23 111 aa16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 CCDC197Q8NCU1 140 aa16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 CCT6BQ92526 530 aa16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 SEMA4DQ92854 862 aa16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 ART4Q93070 314 aa16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 GPRC5CQ9NQ84 441 aa16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 INTS9Q9NV88 658 aaKnown RBP16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 ZNF536O15090 1300 aa16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 PASKQ96RG2 1323 aa16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 MAPK13O15264 365 aa16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 RARGP13631 454 aa16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 SCTRP47872 440 aa16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 HSD17B4P51659 736 aa16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 LLGL1Q15334 1064 aa16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 SIX1Q15475 284 aaPredicted RBP16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 NSMFQ6X4W1 530 aa16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 CCDC25Q86WR0 208 aa16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 CBWD2Q8IUF1 395 aa16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 CPXCR1Q8N123 301 aa16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 CCDC127Q96BQ5 260 aa16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 MTFR1LQ9H019 292 aa16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 LOXHD1Q8IVV2 1947 aa16.92■□□□□ 0.3
TSPAN4-211ENST00000468468 NFIBO00712 420 aa16.91■□□□□ 0.3
TSPAN4-211ENST00000468468 RASGRF2O14827 1237 aa16.91■□□□□ 0.3
TSPAN4-211ENST00000468468 KIF1CO43896 1103 aaKnown RBP16.91■□□□□ 0.3
TSPAN4-211ENST00000468468 RWDD2BP57060 319 aa16.91■□□□□ 0.3
TSPAN4-211ENST00000468468 SF3A3Q12874 501 aaKnown RBP eCLIP16.91■□□□□ 0.3
TSPAN4-211ENST00000468468 RNF207Q6ZRF8 634 aa16.91■□□□□ 0.3
TSPAN4-211ENST00000468468 CYFIP1Q7L576 1253 aa16.91■□□□□ 0.3
TSPAN4-211ENST00000468468 SHC3Q92529 594 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms