RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 TNFRSF12AQ9NP84 129 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 LRFN1Q9P244 771 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 CPNE7Q9UBL6 633 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 HCFC2Q9Y5Z7 792 aa4.44□□□□□ -1.7
HMGB1P25-201ENST00000468402 ISM1B1AKI9 464 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 FFAR2O15552 330 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 EPB41L2O43491 1005 aaKnown RBP4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 FRS3O43559 492 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 SGTAO43765 313 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 EFEMP2O95967 443 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 CSTBP04080 98 aaKnown RBP4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 HARSP12081 509 aaKnown RBP4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 HSD3B1P14060 373 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 TYRP14679 529 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 BDNFP23560 247 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 ADCY8P40145 1251 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 KCNJ5P48544 419 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 NKX6-1P78426 367 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 CD83Q01151 205 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 PPFIA1Q13136 1202 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 PMS2P11Q13670 270 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 DAG1Q14118 895 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 SEPT2Q15019 361 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 MAN2A1Q16706 1144 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 L1TD1Q5T7N2 865 aaKnown RBP4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 TLDC1Q6P9B6 456 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 ZC3H14Q6PJT7 736 aaKnown RBP4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 LIPIQ6XZB0 460 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 GPR155Q7Z3F1 870 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 MAATS1Q7Z4T9 603 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 AMIGO3Q86WK7 504 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 DTX1Q86Y01 620 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 NME8Q8N427 588 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 FAM26EQ8N5C1 309 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 FLCNQ8NFG4 579 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 OR5AN1Q8NGI8 311 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 BRIX1Q8TDN6 353 aaKnown RBP4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 ATXN2LQ8WWM7 1075 aaKnown RBP4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 BRI3BPQ8WY22 251 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 MUL1Q969V5 352 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 TBC1D20Q96BZ9 403 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 TSPAN17Q96FV3 270 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 TMEM41AQ96HV5 264 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 SLC38A3Q99624 504 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 FDXACB1Q9BRP7 624 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 LDAHQ9H6V9 325 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 AGO4Q9HCK5 861 aaKnown RBP4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 PIH1D1Q9NWS0 290 aaKnown RBP4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 RRN3Q9NYV6 651 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 SAE1Q9UBE0 346 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 SCOCQ9UIL1 159 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 SMARCA2P51531 1590 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 CCDC88BA6NC98 1476 aa4.43□□□□□ -1.7
HMGB1P25-201ENST00000468402 DAPK3O43293 454 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 PHF2O75151 1096 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 ADAMTS4O75173 837 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 SKAP2O75563 359 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 FGF18O76093 207 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 FSBPO95073 299 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 HPXP02790 462 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 MALP21145 153 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 CTSSP25774 331 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 MAN1A1P33908 653 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 GDNFP39905 211 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 HSPA7P48741 367 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 GEMIN4P57678 1058 aaKnown RBP4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 ANTXR2P58335 489 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 CD69Q07108 199 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 TMEM62Q0P6H9 643 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 RAB39AQ14964 217 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 PLCL1Q15111 1095 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 ZNF124Q15973 351 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 TAF12Q16514 161 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 FLYWCH1Q4VC44 716 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 C3orf38Q5JPI3 329 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 ZNF648Q5T619 568 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 GRAMD4Q6IC98 578 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 SLC23A3Q6PIS1 610 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 RPTNQ6XPR3 784 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 PQLC1Q8N2U9 271 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 ATG16L2Q8NAA4 619 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 PCSK9Q8NBP7 692 aaKnown RBP4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 PPHLN1Q8NEY8 458 aaKnown RBP4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 ABHD4Q8TB40 342 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 ANKS1AQ92625 1134 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 TNPO1Q92973 898 aaKnown RBP4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 GCC1Q96CN9 775 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 SUCLG2Q96I99 432 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 ZSCAN31Q96LW9 406 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 WDR92Q96MX6 357 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 UIMC1Q96RL1 719 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 ISCA1Q9BUE6 129 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 SENP6Q9GZR1 1112 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 SLAMF7Q9NQ25 335 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 POLR3BQ9NW08 1133 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 ZNF69Q9UC07 566 aa4.42□□□□□ -1.7
HMGB1P25-201ENST00000468402 MYBBP1AQ9BQG0 1328 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms