RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 KCNG1Q9UIX4 513 aa12.29□□□□□ -0.44
COL4A6-205ENST00000468338 GIT1Q9Y2X7 761 aa12.29□□□□□ -0.44
COL4A6-205ENST00000468338 HES2Q9Y543 173 aa12.29□□□□□ -0.44
COL4A6-205ENST00000468338 MYH15Q9Y2K3 1946 aa12.29□□□□□ -0.44
COL4A6-205ENST00000468338 XIRP2A4UGR9 3374 aa12.29□□□□□ -0.44
COL4A6-205ENST00000468338 DLL1O00548 723 aa12.28□□□□□ -0.44
COL4A6-205ENST00000468338 DDHD2O94830 711 aa12.28□□□□□ -0.44
COL4A6-205ENST00000468338 PRKCBP05771 671 aa12.28□□□□□ -0.44
COL4A6-205ENST00000468338 ITGA4P13612 1032 aa12.28□□□□□ -0.44
COL4A6-205ENST00000468338 PBX3P40426 434 aa12.28□□□□□ -0.44
COL4A6-205ENST00000468338 ALDH7A1P49419 539 aaKnown RBP12.28□□□□□ -0.44
COL4A6-205ENST00000468338 PEX3P56589 373 aa12.28□□□□□ -0.44
COL4A6-205ENST00000468338 DSC1Q08554 894 aa12.28□□□□□ -0.44
COL4A6-205ENST00000468338 ADAM15Q13444 863 aa12.28□□□□□ -0.44
COL4A6-205ENST00000468338 PRPF4BQ13523 1007 aaKnown RBP12.28□□□□□ -0.44
COL4A6-205ENST00000468338 ZRSR1Q15695 479 aaKnown RBP12.28□□□□□ -0.44
COL4A6-205ENST00000468338 LEXMQ3ZCV2 418 aa12.28□□□□□ -0.44
COL4A6-205ENST00000468338 NT5DC1Q5TFE4 455 aa12.28□□□□□ -0.44
COL4A6-205ENST00000468338 DESI1Q6ICB0 168 aa12.28□□□□□ -0.44
COL4A6-205ENST00000468338 USP49Q70CQ1 688 aa12.28□□□□□ -0.44
COL4A6-205ENST00000468338 TAS1R3Q7RTX0 852 aa12.28□□□□□ -0.44
COL4A6-205ENST00000468338 CDR2LQ86X02 465 aaPredicted RBP12.28□□□□□ -0.44
COL4A6-205ENST00000468338 CALML4Q96GE6 196 aa12.28□□□□□ -0.44
COL4A6-205ENST00000468338 IGSF21Q96ID5 467 aa12.28□□□□□ -0.44
COL4A6-205ENST00000468338 EPSTI1Q96J88 318 aa12.28□□□□□ -0.44
COL4A6-205ENST00000468338 CDK5RAP3Q96JB5 506 aa12.28□□□□□ -0.44
COL4A6-205ENST00000468338 GAD1Q99259 594 aa12.28□□□□□ -0.44
COL4A6-205ENST00000468338 PLIN2Q99541 437 aa12.28□□□□□ -0.44
COL4A6-205ENST00000468338 NXF3Q9H4D5 531 aaKnown RBP12.28□□□□□ -0.44
COL4A6-205ENST00000468338 PTPRHQ9HD43 1115 aa12.28□□□□□ -0.44
COL4A6-205ENST00000468338 TLR9Q9NR96 1032 aa12.28□□□□□ -0.44
COL4A6-205ENST00000468338 PUF60Q9UHX1 559 aaKnown RBP12.28□□□□□ -0.44
COL4A6-205ENST00000468338 RBM19Q9Y4C8 960 aaKnown RBP12.28□□□□□ -0.44
COL4A6-205ENST00000468338 TDRD15B5MCY1 1934 aaKnown RBP12.27□□□□□ -0.44
COL4A6-205ENST00000468338 ARL5CA6NH57 179 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 K7ERI5 159 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 N4BP3O15049 544 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 NPTXRO95502 500 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 EFEMP2O95967 443 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 PLS3P13797 630 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 PLCG1P19174 1290 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 MARCKSP29966 332 aaPredicted RBP12.27□□□□□ -0.45
COL4A6-205ENST00000468338 GTF2F1P35269 517 aaKnown RBP eCLIP12.27□□□□□ -0.45
COL4A6-205ENST00000468338 KCNQ1P51787 676 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 ZNF131P52739 623 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 KRT17Q04695 432 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 DMP1Q13316 513 aaPredicted RBP12.27□□□□□ -0.45
COL4A6-205ENST00000468338 KCNC3Q14003 757 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 KARSQ15046 597 aaKnown RBP12.27□□□□□ -0.45
COL4A6-205ENST00000468338 TMCO4Q5TGY1 634 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 EEF1DP3Q658K8 133 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 ADGRD2Q7Z7M1 963 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 TMEM173Q86WV6 379 aaPredicted RBP12.27□□□□□ -0.45
COL4A6-205ENST00000468338 HACE1Q8IYU2 909 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 LINC00301Q8NCQ3 95 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.27□□□□□ -0.45
COL4A6-205ENST00000468338 URGCPQ8TCY9 931 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 RAD54LQ92698 747 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 PPP2R3CQ969Q6 453 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 CLIC6Q96NY7 704 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 TMEM175Q9BSA9 504 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 PRR14Q9BWN1 585 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 GZF1Q9H116 711 aaPredicted RBP12.27□□□□□ -0.45
COL4A6-205ENST00000468338 NGRNQ9NPE2 291 aaKnown RBP12.27□□□□□ -0.45
COL4A6-205ENST00000468338 MIOSQ9NXC5 875 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 DNAJB4Q9UDY4 337 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 ODF2LQ9ULJ1 636 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 TNFSF13BQ9Y275 285 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 INPP5FQ9Y2H2 1132 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 USP20Q9Y2K6 914 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 PHLPP2Q6ZVD8 1323 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 TRIP11Q15643 1979 aa12.27□□□□□ -0.45
COL4A6-205ENST00000468338 CCDC169A6NNP5 214 aa12.26□□□□□ -0.45
COL4A6-205ENST00000468338 SFI1A8K8P3 1242 aa12.26□□□□□ -0.45
COL4A6-205ENST00000468338 NT5C1B-RDH14C9J2C7 533 aa12.26□□□□□ -0.45
COL4A6-205ENST00000468338 ABLIM1O14639 778 aa12.26□□□□□ -0.45
COL4A6-205ENST00000468338 ZC3H11AO75152 810 aaKnown RBP eCLIP12.26□□□□□ -0.45
COL4A6-205ENST00000468338 POMCP01189 267 aa12.26□□□□□ -0.45
COL4A6-205ENST00000468338 SSBP05455 408 aaKnown RBP eCLIP12.26□□□□□ -0.45
COL4A6-205ENST00000468338 ZSCAN22P10073 491 aaPredicted RBP12.26□□□□□ -0.45
COL4A6-205ENST00000468338 KCNA5P22460 613 aa12.26□□□□□ -0.45
COL4A6-205ENST00000468338 PROZP22891 400 aa12.26□□□□□ -0.45
COL4A6-205ENST00000468338 DDIT3P35638 169 aa12.26□□□□□ -0.45
COL4A6-205ENST00000468338 MLH1P40692 756 aa12.26□□□□□ -0.45
COL4A6-205ENST00000468338 SLC11A1P49279 550 aa12.26□□□□□ -0.45
COL4A6-205ENST00000468338 RNASELQ05823 741 aaKnown RBP12.26□□□□□ -0.45
COL4A6-205ENST00000468338 DLX2Q07687 328 aaPredicted RBP12.26□□□□□ -0.45
COL4A6-205ENST00000468338 SPECC1Q5M775 1068 aa12.26□□□□□ -0.45
COL4A6-205ENST00000468338 ATF7IP2Q5U623 682 aa12.26□□□□□ -0.45
COL4A6-205ENST00000468338 DDX53Q86TM3 631 aaKnown RBP12.26□□□□□ -0.45
COL4A6-205ENST00000468338 COLGALT2Q8IYK4 626 aa12.26□□□□□ -0.45
COL4A6-205ENST00000468338 EFHBQ8N7U6 833 aa12.26□□□□□ -0.45
COL4A6-205ENST00000468338 TMEM161BQ8NDZ6 487 aa12.26□□□□□ -0.45
COL4A6-205ENST00000468338 BCL7CQ8WUZ0 217 aaPredicted RBP12.26□□□□□ -0.45
COL4A6-205ENST00000468338 ZFRQ96KR1 1074 aaKnown RBP12.26□□□□□ -0.45
COL4A6-205ENST00000468338 ZFP42Q96MM3 310 aa12.26□□□□□ -0.45
COL4A6-205ENST00000468338 CDCA3Q99618 268 aaPredicted RBP12.26□□□□□ -0.45
COL4A6-205ENST00000468338 ACO2Q99798 780 aaKnown RBP12.26□□□□□ -0.45
COL4A6-205ENST00000468338 TRIM6Q9C030 488 aaPredicted RBP12.26□□□□□ -0.45
COL4A6-205ENST00000468338 KMT5AQ9NQR1 393 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms