RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 AGO2Q9UKV8 859 aaKnown RBP7.48□□□□□ -1.21
SCAF4-204ENST00000467731 MICAL3Q7RTP6 2002 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 FAM189A1O60320 539 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 AXLP30530 894 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 ZBTB41Q5SVQ8 909 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 SLC27A1Q6PCB7 646 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 TNS4Q8IZW8 715 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 GPD1LQ8N335 351 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 CNOT6LQ96LI5 555 aaKnown RBP7.47□□□□□ -1.21
SCAF4-204ENST00000467731 CEP63Q96MT8 703 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 EIF2AQ9BY44 585 aaKnown RBP7.47□□□□□ -1.21
SCAF4-204ENST00000467731 THAP9Q9H5L6 903 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 ERVK-5Q9HDB9 667 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 FRMD4BQ9Y2L6 1034 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 CDH23Q9H251 3354 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 N4BP3O15049 544 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 FGFR1OPO95684 399 aaKnown RBP7.47□□□□□ -1.21
SCAF4-204ENST00000467731 TNFSF9P41273 254 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 ACOT2P49753 483 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 OSTNP61366 133 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 TPM4P67936 248 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 MYBPC2Q14324 1141 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 SNRNP35Q16560 246 aaKnown RBP7.47□□□□□ -1.21
SCAF4-204ENST00000467731 TWF2Q6IBS0 349 aaKnown RBP7.47□□□□□ -1.21
SCAF4-204ENST00000467731 ZNF771Q7L3S4 317 aaPredicted RBP7.47□□□□□ -1.21
SCAF4-204ENST00000467731 FILIP1Q7Z7B0 1213 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 CBWD2Q8IUF1 395 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 THNSL1Q8IYQ7 743 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 FAM213AQ9BRX8 229 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 TMX1Q9H3N1 280 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 KCNJ18B7U540 433 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 OGTO15294 1046 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 MGEA5O60502 916 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 NPTXRO95502 500 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 TIMP1P01033 207 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 ADRB2P07550 413 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 EPB41P11171 864 aaKnown RBP7.47□□□□□ -1.21
SCAF4-204ENST00000467731 RAG1P15918 1043 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 PSMC2P35998 433 aaKnown RBP7.47□□□□□ -1.21
SCAF4-204ENST00000467731 KCNJ12Q14500 433 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 CCDC40Q4G0X9 1142 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 TCP11X2Q5H9J9 407 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 CRELD2Q6UXH1 353 aaPredicted RBP7.47□□□□□ -1.21
SCAF4-204ENST00000467731 TMEM192Q8IY95 271 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 DBF4BQ8NFT6 615 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 FBXL18Q96ME1 805 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 MKNK1Q9BUB5 465 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 TRIM6Q9C030 488 aaPredicted RBP7.47□□□□□ -1.21
SCAF4-204ENST00000467731 CHST12Q9NRB3 414 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 HES2Q9Y543 173 aa7.47□□□□□ -1.21
SCAF4-204ENST00000467731 RALGAPA2Q2PPJ7 1873 aa7.46□□□□□ -1.21
SCAF4-204ENST00000467731 KIAA0355O15063 1070 aa7.46□□□□□ -1.21
SCAF4-204ENST00000467731 KIAA0391O15091 583 aaKnown RBP7.46□□□□□ -1.21
SCAF4-204ENST00000467731 SLC16A3O15427 465 aaKnown RBP7.46□□□□□ -1.21
SCAF4-204ENST00000467731 EXTL3O43909 919 aa7.46□□□□□ -1.21
SCAF4-204ENST00000467731 LDHAP00338 332 aaKnown RBP7.46□□□□□ -1.21
SCAF4-204ENST00000467731 CCDC172P0C7W6 258 aa7.46□□□□□ -1.21
SCAF4-204ENST00000467731 MCF2P10911 925 aa7.46□□□□□ -1.21
SCAF4-204ENST00000467731 DCAF4L1Q3SXM0 396 aa7.46□□□□□ -1.21
SCAF4-204ENST00000467731 PLEKHG4Q58EX7 1191 aa7.46□□□□□ -1.21
SCAF4-204ENST00000467731 UBXN11Q5T124 520 aa7.46□□□□□ -1.21
SCAF4-204ENST00000467731 DEFB128Q7Z7B8 93 aa7.46□□□□□ -1.21
SCAF4-204ENST00000467731 FAM114A1Q8IWE2 563 aa7.46□□□□□ -1.21
SCAF4-204ENST00000467731 FAM186BQ8IYM0 893 aa7.46□□□□□ -1.21
SCAF4-204ENST00000467731 RNF217Q8TC41 542 aa7.46□□□□□ -1.21
SCAF4-204ENST00000467731 GRPEL1Q9HAV7 217 aa7.46□□□□□ -1.21
SCAF4-204ENST00000467731 TTC3P53804 2025 aa7.46□□□□□ -1.22
SCAF4-204ENST00000467731 PDCD11Q14690 1871 aaKnown RBP7.46□□□□□ -1.22
SCAF4-204ENST00000467731 LTBP2Q14767 1821 aa7.46□□□□□ -1.22
SCAF4-204ENST00000467731 PARNO95453 639 aaKnown RBP7.46□□□□□ -1.22
SCAF4-204ENST00000467731 GNA14O95837 355 aa7.46□□□□□ -1.22
SCAF4-204ENST00000467731 MSNP26038 577 aaKnown RBP7.46□□□□□ -1.22
SCAF4-204ENST00000467731 EEF1GP26641 437 aaKnown RBP7.46□□□□□ -1.22
SCAF4-204ENST00000467731 MARSP56192 900 aaKnown RBP7.46□□□□□ -1.22
SCAF4-204ENST00000467731 KRT31Q15323 416 aa7.46□□□□□ -1.22
SCAF4-204ENST00000467731 C7orf61Q8IZ16 206 aa7.46□□□□□ -1.22
SCAF4-204ENST00000467731 CCDC51Q96ER9 411 aa7.46□□□□□ -1.22
SCAF4-204ENST00000467731 BORCS6Q96GS4 357 aa7.46□□□□□ -1.22
SCAF4-204ENST00000467731 ADAM2Q99965 735 aa7.46□□□□□ -1.22
SCAF4-204ENST00000467731 NCAPGQ9BPX3 1015 aa7.46□□□□□ -1.22
SCAF4-204ENST00000467731 HTATIP2Q9BUP3 242 aa7.46□□□□□ -1.22
SCAF4-204ENST00000467731 NXF3Q9H4D5 531 aaKnown RBP7.46□□□□□ -1.22
SCAF4-204ENST00000467731 MAGEC2Q9UBF1 373 aaPredicted RBP7.46□□□□□ -1.22
SCAF4-204ENST00000467731 ARMCX3Q9UH62 379 aaPredicted RBP7.46□□□□□ -1.22
SCAF4-204ENST00000467731 CPSF3Q9UKF6 684 aaKnown RBP7.46□□□□□ -1.22
SCAF4-204ENST00000467731 ZNF233A6NK53 670 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 MAPK13O15264 365 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 CXCL10P02778 98 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 STAG3L1P0CL83 205 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 CSF2RAP15509 400 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 SSR1P43307 286 aaKnown RBP7.45□□□□□ -1.22
SCAF4-204ENST00000467731 MTIF2P46199 727 aaKnown RBP7.45□□□□□ -1.22
SCAF4-204ENST00000467731 WNT7BP56706 349 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 SPAG1Q07617 926 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 BFSP1Q12934 665 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 DSC3Q14574 896 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 DCAF17Q5H9S7 520 aaPredicted RBP7.45□□□□□ -1.22
SCAF4-204ENST00000467731 MFSD5Q6N075 450 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 INTS8Q75QN2 995 aaKnown RBP7.45□□□□□ -1.22
SCAF4-204ENST00000467731 APTXQ7Z2E3 356 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms