RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 APBB1IPQ7Z5R6 666 aaPredicted RBP28.46■■■□□ 2.15
PDCD4-205ENST00000467574 THNSL1Q8IYQ7 743 aa28.46■■■□□ 2.15
PDCD4-205ENST00000467574 MRPL44Q9H9J2 332 aaKnown RBP28.46■■■□□ 2.15
PDCD4-205ENST00000467574 GDAQ9Y2T3 454 aa28.46■■■□□ 2.15
PDCD4-205ENST00000467574 PTGESO14684 152 aa28.45■■■□□ 2.14
PDCD4-205ENST00000467574 HNRNPDLO14979 420 aaKnown RBP28.45■■■□□ 2.14
PDCD4-205ENST00000467574 GALTP07902 379 aa28.45■■■□□ 2.14
PDCD4-205ENST00000467574 PPM1AP35813 382 aa28.45■■■□□ 2.14
PDCD4-205ENST00000467574 SYKP43405 635 aa28.45■■■□□ 2.14
PDCD4-205ENST00000467574 SLC11A1P49279 550 aa28.45■■■□□ 2.14
PDCD4-205ENST00000467574 ASIC1P78348 528 aa28.45■■■□□ 2.14
PDCD4-205ENST00000467574 PLCB3Q01970 1234 aa28.45■■■□□ 2.14
PDCD4-205ENST00000467574 EHHADHQ08426 723 aa28.45■■■□□ 2.14
PDCD4-205ENST00000467574 PTPROQ16827 1216 aa28.45■■■□□ 2.14
PDCD4-205ENST00000467574 CCDC65Q8IXS2 484 aa28.45■■■□□ 2.14
PDCD4-205ENST00000467574 MICALL1Q8N3F8 863 aa28.45■■■□□ 2.14
PDCD4-205ENST00000467574 HVCN1Q96D96 273 aa28.45■■■□□ 2.14
PDCD4-205ENST00000467574 BICD1Q96G01 975 aa28.45■■■□□ 2.14
PDCD4-205ENST00000467574 GBP3Q9H0R5 595 aa28.45■■■□□ 2.14
PDCD4-205ENST00000467574 CHMP5Q9NZZ3 219 aa28.45■■■□□ 2.14
PDCD4-205ENST00000467574 USP25Q9UHP3 1055 aa28.45■■■□□ 2.14
PDCD4-205ENST00000467574 ANK1P16157 1881 aa28.44■■■□□ 2.14
PDCD4-205ENST00000467574 MEFVO15553 781 aaPredicted RBP28.44■■■□□ 2.14
PDCD4-205ENST00000467574 MYBP10242 640 aa28.44■■■□□ 2.14
PDCD4-205ENST00000467574 AFMP43652 599 aa28.44■■■□□ 2.14
PDCD4-205ENST00000467574 CUL4BQ13620 913 aa28.44■■■□□ 2.14
PDCD4-205ENST00000467574 COLGALT2Q8IYK4 626 aa28.44■■■□□ 2.14
PDCD4-205ENST00000467574 CEP57L1Q8IYX8 460 aa28.44■■■□□ 2.14
PDCD4-205ENST00000467574 BCL7CQ8WUZ0 217 aaPredicted RBP28.44■■■□□ 2.14
PDCD4-205ENST00000467574 POF1BQ8WVV4 589 aa28.44■■■□□ 2.14
PDCD4-205ENST00000467574 PAGE5Q96GU1 130 aa28.44■■■□□ 2.14
PDCD4-205ENST00000467574 BLZF1Q9H2G9 400 aa28.44■■■□□ 2.14
PDCD4-205ENST00000467574 IKZF4Q9H2S9 585 aa28.44■■■□□ 2.14
PDCD4-205ENST00000467574 SPG21Q9NZD8 308 aa28.44■■■□□ 2.14
PDCD4-205ENST00000467574 NT5C1B-RDH14C9J2C7 533 aa28.43■■■□□ 2.14
PDCD4-205ENST00000467574 FAM189A1O60320 539 aa28.43■■■□□ 2.14
PDCD4-205ENST00000467574 LIG4P49917 911 aa28.43■■■□□ 2.14
PDCD4-205ENST00000467574 UBE3AQ05086 875 aa28.43■■■□□ 2.14
PDCD4-205ENST00000467574 KCNA1Q09470 495 aa28.43■■■□□ 2.14
PDCD4-205ENST00000467574 GRIK3Q13003 919 aa28.43■■■□□ 2.14
PDCD4-205ENST00000467574 CCDC85BQ15834 202 aaPredicted RBP28.43■■■□□ 2.14
PDCD4-205ENST00000467574 TPRNQ4KMQ1 711 aa28.43■■■□□ 2.14
PDCD4-205ENST00000467574 GLIS3Q8NEA6 775 aa28.43■■■□□ 2.14
PDCD4-205ENST00000467574 HPS3Q969F9 1004 aa28.43■■■□□ 2.14
PDCD4-205ENST00000467574 TMEM175Q9BSA9 504 aa28.43■■■□□ 2.14
PDCD4-205ENST00000467574 TCHPQ9BT92 498 aa28.43■■■□□ 2.14
PDCD4-205ENST00000467574 TISP43B9A030 160 aa28.42■■■□□ 2.14
PDCD4-205ENST00000467574 CLDN3O15551 220 aa28.42■■■□□ 2.14
PDCD4-205ENST00000467574 GCNT3O95395 438 aa28.42■■■□□ 2.14
PDCD4-205ENST00000467574 HARSP12081 509 aaKnown RBP28.42■■■□□ 2.14
PDCD4-205ENST00000467574 ALDH7A1P49419 539 aaKnown RBP28.42■■■□□ 2.14
PDCD4-205ENST00000467574 NAB2Q15742 525 aa28.42■■■□□ 2.14
PDCD4-205ENST00000467574 TIGD5Q53EQ6 642 aa28.42■■■□□ 2.14
PDCD4-205ENST00000467574 L1TD1Q5T7N2 865 aaKnown RBP28.42■■■□□ 2.14
PDCD4-205ENST00000467574 UNC13DQ70J99 1090 aa28.42■■■□□ 2.14
PDCD4-205ENST00000467574 RPS6KC1Q96S38 1066 aa28.42■■■□□ 2.14
PDCD4-205ENST00000467574 LZTS1Q9Y250 596 aa28.42■■■□□ 2.14
PDCD4-205ENST00000467574 ANKRD63C9JTQ0 380 aa28.41■■■□□ 2.14
PDCD4-205ENST00000467574 IRS1P35568 1242 aa28.41■■■□□ 2.14
PDCD4-205ENST00000467574 OSTNP61366 133 aa28.41■■■□□ 2.14
PDCD4-205ENST00000467574 XKR4Q5GH76 650 aa28.41■■■□□ 2.14
PDCD4-205ENST00000467574 ALKAL1Q6UXT8 129 aa28.41■■■□□ 2.14
PDCD4-205ENST00000467574 PPM1EQ8WY54 764 aa28.41■■■□□ 2.14
PDCD4-205ENST00000467574 IGSF21Q96ID5 467 aa28.41■■■□□ 2.14
PDCD4-205ENST00000467574 CCDC94Q9BW85 323 aaPredicted RBP28.41■■■□□ 2.14
PDCD4-205ENST00000467574 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.4■■■□□ 2.14
PDCD4-205ENST00000467574 A0A0B4J269 797 aa28.4■■■□□ 2.14
PDCD4-205ENST00000467574 CARNS1A5YM72 827 aa28.4■■■□□ 2.14
PDCD4-205ENST00000467574 KLRC4O43908 158 aa28.4■■■□□ 2.14
PDCD4-205ENST00000467574 CSPG5O95196 566 aa28.4■■■□□ 2.14
PDCD4-205ENST00000467574 ALCAMQ13740 583 aa28.4■■■□□ 2.14
PDCD4-205ENST00000467574 SEZ6Q53EL9 994 aa28.4■■■□□ 2.14
PDCD4-205ENST00000467574 SNX27Q96L92 541 aa28.4■■■□□ 2.14
PDCD4-205ENST00000467574 FAM193BQ96PV7 902 aaPredicted RBP28.4■■■□□ 2.14
PDCD4-205ENST00000467574 VN1R3Q9BXE9 311 aa28.4■■■□□ 2.14
PDCD4-205ENST00000467574 MARCH5Q9NX47 278 aa28.4■■■□□ 2.14
PDCD4-205ENST00000467574 PCDHGC5Q9Y5F6 944 aa28.4■■■□□ 2.14
PDCD4-205ENST00000467574 STYXL1Q9Y6J8 313 aa28.4■■■□□ 2.14
PDCD4-205ENST00000467574 A0A0C4DFX4 3053 aa28.4■■■□□ 2.14
PDCD4-205ENST00000467574 FSCN2O14926 492 aa28.39■■■□□ 2.14
PDCD4-205ENST00000467574 ZBTB41Q5SVQ8 909 aa28.39■■■□□ 2.14
PDCD4-205ENST00000467574 PPP1R10Q96QC0 940 aaKnown RBP28.39■■■□□ 2.14
PDCD4-205ENST00000467574 NSUN3Q9H649 340 aaKnown RBP28.39■■■□□ 2.14
PDCD4-205ENST00000467574 TLR9Q9NR96 1032 aa28.39■■■□□ 2.14
PDCD4-205ENST00000467574 TSHZ2Q9NRE2 1034 aa28.39■■■□□ 2.14
PDCD4-205ENST00000467574 PCDHB13Q9Y5F0 798 aa28.39■■■□□ 2.14
PDCD4-205ENST00000467574 PVALEFA0A1B0GWK0 134 aa28.38■■■□□ 2.13
PDCD4-205ENST00000467574 NRP1O14786 923 aa28.38■■■□□ 2.13
PDCD4-205ENST00000467574 ZNF202O95125 648 aa28.38■■■□□ 2.13
PDCD4-205ENST00000467574 ERVFC1P60507 584 aa28.38■■■□□ 2.13
PDCD4-205ENST00000467574 TCEAL5Q5H9L2 206 aa28.38■■■□□ 2.13
PDCD4-205ENST00000467574 GLRA4Q5JXX5 417 aa28.38■■■□□ 2.13
PDCD4-205ENST00000467574 FAM26FQ5R3K3 315 aa28.38■■■□□ 2.13
PDCD4-205ENST00000467574 KRBA2Q6ZNG9 492 aa28.38■■■□□ 2.13
PDCD4-205ENST00000467574 EPM2AIP1Q7L775 607 aaPredicted RBP28.38■■■□□ 2.13
PDCD4-205ENST00000467574 FMR1NBQ8N0W7 255 aaPredicted RBP28.38■■■□□ 2.13
PDCD4-205ENST00000467574 TMEM169Q96HH4 297 aa28.38■■■□□ 2.13
PDCD4-205ENST00000467574 ACAP3Q96P50 834 aa28.38■■■□□ 2.13
PDCD4-205ENST00000467574 ACCSQ96QU6 501 aa28.38■■■□□ 2.13
PDCD4-205ENST00000467574 TOPORSQ9NS56 1045 aaPredicted RBP28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms