RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 SCRN1Q12765 414 aa8.25□□□□□ -1.09
SPTBN1-204ENST00000467371 DPYSQ14117 519 aa8.25□□□□□ -1.09
SPTBN1-204ENST00000467371 ZNF267Q14586 743 aaPredicted RBP8.25□□□□□ -1.09
SPTBN1-204ENST00000467371 LRRFIP1Q32MZ4 808 aaKnown RBP8.25□□□□□ -1.09
SPTBN1-204ENST00000467371 DCAF17Q5H9S7 520 aaPredicted RBP8.25□□□□□ -1.09
SPTBN1-204ENST00000467371 CORO6Q6QEF8 472 aa8.25□□□□□ -1.09
SPTBN1-204ENST00000467371 TTLL7Q6ZT98 887 aa8.25□□□□□ -1.09
SPTBN1-204ENST00000467371 RFX8Q6ZV50 586 aa8.25□□□□□ -1.09
SPTBN1-204ENST00000467371 BNIPLQ7Z465 357 aa8.25□□□□□ -1.09
SPTBN1-204ENST00000467371 OR6P1Q8NGX9 317 aa8.25□□□□□ -1.09
SPTBN1-204ENST00000467371 PTP4A1Q93096 173 aa8.25□□□□□ -1.09
SPTBN1-204ENST00000467371 PLD4Q96BZ4 506 aa8.25□□□□□ -1.09
SPTBN1-204ENST00000467371 XAGE2Q96GT9 111 aa8.25□□□□□ -1.09
SPTBN1-204ENST00000467371 ACAT2Q9BWD1 397 aa8.25□□□□□ -1.09
SPTBN1-204ENST00000467371 USP40Q9NVE5 1235 aa8.25□□□□□ -1.09
SPTBN1-204ENST00000467371 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.25□□□□□ -1.09
SPTBN1-204ENST00000467371 ZSWIM5Q9P217 1185 aa8.25□□□□□ -1.09
SPTBN1-204ENST00000467371 GRHPRQ9UBQ7 328 aa8.25□□□□□ -1.09
SPTBN1-204ENST00000467371 DNAI1Q9UI46 699 aa8.25□□□□□ -1.09
SPTBN1-204ENST00000467371 LRFN2Q9ULH4 789 aa8.25□□□□□ -1.09
SPTBN1-204ENST00000467371 FAM135BQ49AJ0 1406 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 SRGAP3O43295 1099 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 RNGTTO60942 597 aaKnown RBP8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 MT-CO1P00395 513 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 MYBP10242 640 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 SCG2P13521 617 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 DNAJB1P25685 340 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 PRIM2P49643 509 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 ARL4CP56559 192 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 IKBKEQ14164 716 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 MTHFSDQ2M296 383 aaKnown RBP8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 OXLD1Q5BKU9 147 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 WLSQ5T9L3 541 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 OR52K1Q8NGK4 314 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 GIMAP7Q8NHV1 300 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 ZNF483Q8TF39 744 aaPredicted RBP8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 NKD1Q969G9 470 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 FOXP3Q9BZS1 431 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 DNAJC18Q9H819 358 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 MMRN2Q9H8L6 949 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 SLC13A4Q9UKG4 626 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 CLRN2A0PK11 232 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 CCDC151A5D8V7 595 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 NPC1O15118 1278 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 GLRX3O76003 335 aaKnown RBP8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 DDAH1O94760 285 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 RHOXF2BP0C7M4 288 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 RFC4P35249 363 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 GSDMDP57764 484 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 IFI35P80217 286 aaPredicted RBP8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 FRG1Q14331 258 aaKnown RBP8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 MXD4Q14582 209 aaPredicted RBP8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 ALG11Q2TAA5 492 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 BBS9Q3SYG4 887 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 ZMYM1Q5SVZ6 1142 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 FAM178BQ8IXR5 827 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 SLC4A11Q8NBS3 891 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 DDX54Q8TDD1 881 aaKnown RBP8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 TCF25Q9BQ70 676 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 RHOXF2Q9BQY4 288 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 CLSTN2Q9H4D0 955 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 IFT22Q9H7X7 185 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 HPS4Q9NQG7 708 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 ATXN2Q99700 1313 aaKnown RBP8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 SSH2Q76I76 1423 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 GNAT3A8MTJ3 354 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 IKBKBO14920 756 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 PGM3O95394 542 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 PSAPP07602 524 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 SNRNP70P08621 437 aaKnown RBP8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 MAPK3P27361 379 aaPredicted RBP8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 PIP4K2AP48426 406 aaPredicted RBP8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 RPS6KA3P51812 740 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 ETF1P62495 437 aaKnown RBP8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 AIMP1Q12904 312 aaKnown RBP8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 B4GALNT4Q76KP1 1039 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 CACNA2D3Q8IZS8 1091 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 ARRDC4Q8NCT1 418 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 DENND6BQ8NEG7 585 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 CREB3L4Q8TEY5 395 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 THOC1Q96FV9 657 aaKnown RBP8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 NUP62CLQ9H1M0 184 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 DCTPP1Q9H773 170 aa8.24□□□□□ -1.09
SPTBN1-204ENST00000467371 RGSL1A5PLK6 1076 aa8.23□□□□□ -1.09
SPTBN1-204ENST00000467371 C6orf229H3BNL8 230 aa8.23□□□□□ -1.09
SPTBN1-204ENST00000467371 ASAP2O43150 1006 aa8.23□□□□□ -1.09
SPTBN1-204ENST00000467371 NPPAP01160 153 aa8.23□□□□□ -1.09
SPTBN1-204ENST00000467371 CCT8P50990 548 aa8.23□□□□□ -1.09
SPTBN1-204ENST00000467371 CUL2Q13617 745 aa8.23□□□□□ -1.09
SPTBN1-204ENST00000467371 KRT32Q14532 448 aa8.23□□□□□ -1.09
SPTBN1-204ENST00000467371 ZNF792Q3KQV3 632 aa8.23□□□□□ -1.09
SPTBN1-204ENST00000467371 TRIM65Q6PJ69 517 aa8.23□□□□□ -1.09
SPTBN1-204ENST00000467371 KRT73Q86Y46 540 aa8.23□□□□□ -1.09
SPTBN1-204ENST00000467371 UNC45BQ8IWX7 931 aa8.23□□□□□ -1.09
SPTBN1-204ENST00000467371 CRACR2BQ8N4Y2 399 aaPredicted RBP8.23□□□□□ -1.09
SPTBN1-204ENST00000467371 SEPT1Q8WYJ6 367 aa8.23□□□□□ -1.09
SPTBN1-204ENST00000467371 TUBA1CQ9BQE3 449 aa8.23□□□□□ -1.09
SPTBN1-204ENST00000467371 STMN4Q9H169 189 aaPredicted RBP8.23□□□□□ -1.09
SPTBN1-204ENST00000467371 VPS18Q9P253 973 aa8.23□□□□□ -1.09
SPTBN1-204ENST00000467371 IMPACTQ9P2X3 320 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms