RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 RIOX1Q9H6W3 641 aa6.6□□□□□ -1.35
ATG3-204ENST00000467275 ZNF185O15231 689 aa6.59□□□□□ -1.35
ATG3-204ENST00000467275 ENPP1P22413 925 aa6.59□□□□□ -1.35
ATG3-204ENST00000467275 PTPN7P35236 360 aa6.59□□□□□ -1.35
ATG3-204ENST00000467275 BMPR1AP36894 532 aa6.59□□□□□ -1.35
ATG3-204ENST00000467275 BEAN1Q3B7T3 259 aa6.59□□□□□ -1.35
ATG3-204ENST00000467275 PDCD4Q53EL6 469 aaKnown RBP6.59□□□□□ -1.35
ATG3-204ENST00000467275 Q6YL49 198 aa6.59□□□□□ -1.35
ATG3-204ENST00000467275 CMTR2Q8IYT2 770 aaKnown RBP6.59□□□□□ -1.35
ATG3-204ENST00000467275 CPEB3Q8NE35 698 aaKnown RBP6.59□□□□□ -1.35
ATG3-204ENST00000467275 APOBEC2Q9Y235 224 aaKnown RBP6.59□□□□□ -1.35
ATG3-204ENST00000467275 USP15Q9Y4E8 981 aaPredicted RBP6.59□□□□□ -1.35
ATG3-204ENST00000467275 AKR1B10O60218 316 aa6.58□□□□□ -1.36
ATG3-204ENST00000467275 ADSLP30566 484 aaPredicted RBP6.58□□□□□ -1.36
ATG3-204ENST00000467275 FLT3LGP49771 235 aa6.58□□□□□ -1.36
ATG3-204ENST00000467275 GUCY1B3Q02153 619 aa6.58□□□□□ -1.36
ATG3-204ENST00000467275 MFSD14BQ5SR56 506 aa6.58□□□□□ -1.36
ATG3-204ENST00000467275 RNF180Q86T96 592 aa6.58□□□□□ -1.36
ATG3-204ENST00000467275 NOP9Q86U38 636 aaKnown RBP6.58□□□□□ -1.36
ATG3-204ENST00000467275 UBR7Q8N806 425 aa6.58□□□□□ -1.36
ATG3-204ENST00000467275 PHACTR3Q96KR7 559 aa6.58□□□□□ -1.36
ATG3-204ENST00000467275 UNC119BA6NIH7 251 aa6.57□□□□□ -1.36
ATG3-204ENST00000467275 ADCY6O43306 1168 aa6.57□□□□□ -1.36
ATG3-204ENST00000467275 DDX6P26196 483 aaKnown RBP eCLIP6.57□□□□□ -1.36
ATG3-204ENST00000467275 AVPR1BP47901 424 aa6.57□□□□□ -1.36
ATG3-204ENST00000467275 CCT2P78371 535 aaKnown RBP6.57□□□□□ -1.36
ATG3-204ENST00000467275 MXRA7P84157 204 aa6.57□□□□□ -1.36
ATG3-204ENST00000467275 MST1LQ2TV78 715 aa6.57□□□□□ -1.36
ATG3-204ENST00000467275 FAM47AQ5JRC9 791 aa6.57□□□□□ -1.36
ATG3-204ENST00000467275 ATXN7L2Q5T6C5 722 aaPredicted RBP6.57□□□□□ -1.36
ATG3-204ENST00000467275 FAM180AQ6UWF9 173 aa6.57□□□□□ -1.36
ATG3-204ENST00000467275 THNSL2Q86YJ6 484 aa6.57□□□□□ -1.36
ATG3-204ENST00000467275 REPS2Q8NFH8 660 aa6.57□□□□□ -1.36
ATG3-204ENST00000467275 RIN2Q8WYP3 895 aaPredicted RBP6.57□□□□□ -1.36
ATG3-204ENST00000467275 CAVIN3Q969G5 261 aa6.57□□□□□ -1.36
ATG3-204ENST00000467275 FPGT-TNNI3KV9GXZ4 949 aa6.57□□□□□ -1.36
ATG3-204ENST00000467275 ZAR1LA6NP61 321 aa6.56□□□□□ -1.36
ATG3-204ENST00000467275 GOLGA8AA7E2F4 631 aa6.56□□□□□ -1.36
ATG3-204ENST00000467275 CHN2P52757 468 aa6.56□□□□□ -1.36
ATG3-204ENST00000467275 CLRN1P58418 232 aa6.56□□□□□ -1.36
ATG3-204ENST00000467275 FAM102AQ5T9C2 384 aaPredicted RBP6.56□□□□□ -1.36
ATG3-204ENST00000467275 OLFML1Q6UWY5 402 aa6.56□□□□□ -1.36
ATG3-204ENST00000467275 GPR156Q8NFN8 814 aa6.56□□□□□ -1.36
ATG3-204ENST00000467275 SLC35B2Q8TB61 432 aa6.56□□□□□ -1.36
ATG3-204ENST00000467275 TGFBRAP1Q8WUH2 860 aa6.56□□□□□ -1.36
ATG3-204ENST00000467275 AUTS2Q8WXX7 1259 aa6.56□□□□□ -1.36
ATG3-204ENST00000467275 SLKQ9H2G2 1235 aaPredicted RBP6.56□□□□□ -1.36
ATG3-204ENST00000467275 ATP11BQ9Y2G3 1177 aa6.56□□□□□ -1.36
ATG3-204ENST00000467275 MAP3K2Q9Y2U5 619 aa6.56□□□□□ -1.36
ATG3-204ENST00000467275 TBX22Q9Y458 520 aa6.56□□□□□ -1.36
ATG3-204ENST00000467275 DRGXA6NNA5 263 aa6.55□□□□□ -1.36
ATG3-204ENST00000467275 PJA2O43164 708 aa6.55□□□□□ -1.36
ATG3-204ENST00000467275 SNRPA1P09661 255 aaKnown RBP6.55□□□□□ -1.36
ATG3-204ENST00000467275 ECHS1P30084 290 aa6.55□□□□□ -1.36
ATG3-204ENST00000467275 SOX5P35711 763 aa6.55□□□□□ -1.36
ATG3-204ENST00000467275 MRPS9P82933 396 aaKnown RBP6.55□□□□□ -1.36
ATG3-204ENST00000467275 STRIP1Q5VSL9 837 aa6.55□□□□□ -1.36
ATG3-204ENST00000467275 STRA8Q7Z7C7 330 aa6.55□□□□□ -1.36
ATG3-204ENST00000467275 OR7D4Q8NG98 312 aa6.55□□□□□ -1.36
ATG3-204ENST00000467275 UHRF1Q96T88 793 aaPredicted RBP6.55□□□□□ -1.36
ATG3-204ENST00000467275 QRSL1Q9H0R6 528 aaKnown RBP6.55□□□□□ -1.36
ATG3-204ENST00000467275 BCO1Q9HAY6 547 aa6.55□□□□□ -1.36
ATG3-204ENST00000467275 DKK2Q9UBU2 259 aa6.55□□□□□ -1.36
ATG3-204ENST00000467275 CXorf49A8MYA2 514 aaPredicted RBP6.54□□□□□ -1.36
ATG3-204ENST00000467275 KIAA0355O15063 1070 aa6.54□□□□□ -1.36
ATG3-204ENST00000467275 HKR1P10072 659 aa6.54□□□□□ -1.36
ATG3-204ENST00000467275 MTHFD2P13995 350 aa6.54□□□□□ -1.36
ATG3-204ENST00000467275 PER3P56645 1201 aa6.54□□□□□ -1.36
ATG3-204ENST00000467275 RAP2BP61225 183 aa6.54□□□□□ -1.36
ATG3-204ENST00000467275 RESTQ13127 1097 aa6.54□□□□□ -1.36
ATG3-204ENST00000467275 GJC2Q5T442 439 aaPredicted RBP6.54□□□□□ -1.36
ATG3-204ENST00000467275 ZNF572Q7Z3I7 529 aaPredicted RBP6.54□□□□□ -1.36
ATG3-204ENST00000467275 TRMT2AQ8IZ69 625 aaKnown RBP6.54□□□□□ -1.36
ATG3-204ENST00000467275 FBXO18Q8NFZ0 1043 aa6.54□□□□□ -1.36
ATG3-204ENST00000467275 TSPEARQ8WU66 669 aa6.54□□□□□ -1.36
ATG3-204ENST00000467275 FATE1Q969F0 183 aa6.54□□□□□ -1.36
ATG3-204ENST00000467275 CAAP1Q9H8G2 361 aa6.54□□□□□ -1.36
ATG3-204ENST00000467275 IFT122Q9HBG6 1241 aa6.54□□□□□ -1.36
ATG3-204ENST00000467275 RNF181Q9P0P0 153 aa6.54□□□□□ -1.36
ATG3-204ENST00000467275 PIPSLA2A3N6 862 aa6.53□□□□□ -1.36
ATG3-204ENST00000467275 BRINP1O60477 761 aa6.53□□□□□ -1.36
ATG3-204ENST00000467275 SCAND1P57086 179 aa6.53□□□□□ -1.36
ATG3-204ENST00000467275 TP53BP2Q13625 1128 aa6.53□□□□□ -1.36
ATG3-204ENST00000467275 ADRM1Q16186 407 aa6.53□□□□□ -1.36
ATG3-204ENST00000467275 CT47A1Q5JQC4 288 aaPredicted RBP6.53□□□□□ -1.36
ATG3-204ENST00000467275 RRP12Q5JTH9 1297 aaKnown RBP6.53□□□□□ -1.36
ATG3-204ENST00000467275 ABHD17BQ5VST6 288 aa6.53□□□□□ -1.36
ATG3-204ENST00000467275 METRNLQ641Q3 311 aa6.53□□□□□ -1.36
ATG3-204ENST00000467275 CMIPQ8IY22 773 aa6.53□□□□□ -1.36
ATG3-204ENST00000467275 COQ10AQ96MF6 247 aa6.53□□□□□ -1.36
ATG3-204ENST00000467275 ADAM2Q99965 735 aa6.53□□□□□ -1.36
ATG3-204ENST00000467275 REXO4Q9GZR2 422 aaKnown RBP6.53□□□□□ -1.36
ATG3-204ENST00000467275 SYBUQ9NX95 663 aa6.53□□□□□ -1.36
ATG3-204ENST00000467275 PTGFRNQ9P2B2 879 aa6.53□□□□□ -1.36
ATG3-204ENST00000467275 ZBTB21Q9ULJ3 1066 aa6.53□□□□□ -1.36
ATG3-204ENST00000467275 BLOC1S1P78537 153 aa6.52□□□□□ -1.37
ATG3-204ENST00000467275 SP140Q13342 867 aa6.52□□□□□ -1.37
ATG3-204ENST00000467275 MUM1Q2TAK8 710 aa6.52□□□□□ -1.37
ATG3-204ENST00000467275 SPDYE7PQ495Y7 208 aa6.52□□□□□ -1.37
ATG3-204ENST00000467275 MUM1L1Q5H9M0 696 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms