RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 ZNHIT2Q9UHR6 403 aa6.17□□□□□ -1.42
PRPF40A-205ENST00000467114 TNFRSF18Q9Y5U5 241 aa6.17□□□□□ -1.42
PRPF40A-205ENST00000467114 ZAR1LA6NP61 321 aa6.16□□□□□ -1.42
PRPF40A-205ENST00000467114 B5MCH6 92 aa6.16□□□□□ -1.42
PRPF40A-205ENST00000467114 ULK1O75385 1050 aa6.16□□□□□ -1.42
PRPF40A-205ENST00000467114 SESN3P58005 492 aa6.16□□□□□ -1.42
PRPF40A-205ENST00000467114 NHLH2Q02577 135 aa6.16□□□□□ -1.42
PRPF40A-205ENST00000467114 TRIM25Q14258 630 aaKnown RBP6.16□□□□□ -1.42
PRPF40A-205ENST00000467114 DDB1Q16531 1140 aa6.16□□□□□ -1.42
PRPF40A-205ENST00000467114 CT47A1Q5JQC4 288 aaPredicted RBP6.16□□□□□ -1.42
PRPF40A-205ENST00000467114 NECAB2Q7Z6G3 386 aa6.16□□□□□ -1.42
PRPF40A-205ENST00000467114 PLXDC1Q8IUK5 500 aa6.16□□□□□ -1.42
PRPF40A-205ENST00000467114 CBARPQ8N350 705 aaPredicted RBP6.16□□□□□ -1.42
PRPF40A-205ENST00000467114 SNX33Q8WV41 574 aa6.16□□□□□ -1.42
PRPF40A-205ENST00000467114 ZNF764Q96H86 408 aaPredicted RBP6.16□□□□□ -1.42
PRPF40A-205ENST00000467114 ANO3Q9BYT9 981 aa6.16□□□□□ -1.42
PRPF40A-205ENST00000467114 WDR11Q9BZH6 1224 aa6.16□□□□□ -1.42
PRPF40A-205ENST00000467114 SPON1Q9HCB6 807 aa6.16□□□□□ -1.42
PRPF40A-205ENST00000467114 TOPORSQ9NS56 1045 aaPredicted RBP6.16□□□□□ -1.42
PRPF40A-205ENST00000467114 SYBUQ9NX95 663 aa6.16□□□□□ -1.42
PRPF40A-205ENST00000467114 ANKFY1Q9P2R3 1169 aa6.16□□□□□ -1.42
PRPF40A-205ENST00000467114 KCNG1Q9UIX4 513 aa6.16□□□□□ -1.42
PRPF40A-205ENST00000467114 NOP58Q9Y2X3 529 aaKnown RBP6.16□□□□□ -1.42
PRPF40A-205ENST00000467114 ZMYM3Q14202 1370 aa6.16□□□□□ -1.42
PRPF40A-205ENST00000467114 TBKBP1A7MCY6 615 aa6.15□□□□□ -1.42
PRPF40A-205ENST00000467114 KDM1AO60341 852 aa6.15□□□□□ -1.42
PRPF40A-205ENST00000467114 TMEM127O75204 238 aa6.15□□□□□ -1.42
PRPF40A-205ENST00000467114 CLEC2LP0C7M8 214 aa6.15□□□□□ -1.42
PRPF40A-205ENST00000467114 MGAT1P26572 445 aa6.15□□□□□ -1.42
PRPF40A-205ENST00000467114 RNASE9P60153 205 aaKnown RBP6.15□□□□□ -1.42
PRPF40A-205ENST00000467114 CCDC142Q17RM4 750 aa6.15□□□□□ -1.42
PRPF40A-205ENST00000467114 CCDC62Q6P9F0 684 aa6.15□□□□□ -1.42
PRPF40A-205ENST00000467114 ABHD15Q6UXT9 468 aa6.15□□□□□ -1.42
PRPF40A-205ENST00000467114 C11orf74Q86VG3 221 aa6.15□□□□□ -1.42
PRPF40A-205ENST00000467114 OR10H5Q8NGA6 315 aa6.15□□□□□ -1.42
PRPF40A-205ENST00000467114 NTN5Q8WTR8 489 aaPredicted RBP6.15□□□□□ -1.42
PRPF40A-205ENST00000467114 COG1Q8WTW3 980 aa6.15□□□□□ -1.42
PRPF40A-205ENST00000467114 STAG1Q8WVM7 1258 aa6.15□□□□□ -1.42
PRPF40A-205ENST00000467114 LMBR1Q8WVP7 490 aa6.15□□□□□ -1.42
PRPF40A-205ENST00000467114 CDC5LQ99459 802 aaKnown RBP6.15□□□□□ -1.42
PRPF40A-205ENST00000467114 PRDM12Q9H4Q4 367 aa6.15□□□□□ -1.42
PRPF40A-205ENST00000467114 MCM8Q9UJA3 840 aa6.15□□□□□ -1.42
PRPF40A-205ENST00000467114 CDY2AQ9Y6F7 541 aa6.15□□□□□ -1.42
PRPF40A-205ENST00000467114 PRAMEF4O60810 478 aa6.14□□□□□ -1.43
PRPF40A-205ENST00000467114 ITGA10O75578 1167 aa6.14□□□□□ -1.43
PRPF40A-205ENST00000467114 NDUFA10O95299 355 aa6.14□□□□□ -1.43
PRPF40A-205ENST00000467114 GASTP01350 101 aa6.14□□□□□ -1.43
PRPF40A-205ENST00000467114 CPEP16870 476 aa6.14□□□□□ -1.43
PRPF40A-205ENST00000467114 USP14P54578 494 aa6.14□□□□□ -1.43
PRPF40A-205ENST00000467114 BMT2Q1RMZ1 405 aa6.14□□□□□ -1.43
PRPF40A-205ENST00000467114 PITRM1Q5JRX3 1037 aa6.14□□□□□ -1.43
PRPF40A-205ENST00000467114 ANKS6Q68DC2 871 aa6.14□□□□□ -1.43
PRPF40A-205ENST00000467114 CMIPQ8IY22 773 aa6.14□□□□□ -1.43
PRPF40A-205ENST00000467114 ZCRB1Q8TBF4 217 aaKnown RBP6.14□□□□□ -1.43
PRPF40A-205ENST00000467114 COQ10AQ96MF6 247 aa6.14□□□□□ -1.43
PRPF40A-205ENST00000467114 PTGFRNQ9P2B2 879 aa6.14□□□□□ -1.43
PRPF40A-205ENST00000467114 WASHC2CQ9Y4E1 1318 aa6.14□□□□□ -1.43
PRPF40A-205ENST00000467114 FZD9O00144 591 aa6.13□□□□□ -1.43
PRPF40A-205ENST00000467114 ZNF185O15231 689 aa6.13□□□□□ -1.43
PRPF40A-205ENST00000467114 RAB11FIP3O75154 756 aa6.13□□□□□ -1.43
PRPF40A-205ENST00000467114 RBP3P10745 1247 aa6.13□□□□□ -1.43
PRPF40A-205ENST00000467114 CTSSP25774 331 aa6.13□□□□□ -1.43
PRPF40A-205ENST00000467114 AVPR1BP47901 424 aa6.13□□□□□ -1.43
PRPF40A-205ENST00000467114 EVA1CP58658 441 aa6.13□□□□□ -1.43
PRPF40A-205ENST00000467114 TMPRSS15P98073 1019 aa6.13□□□□□ -1.43
PRPF40A-205ENST00000467114 PDCD4Q53EL6 469 aaKnown RBP6.13□□□□□ -1.43
PRPF40A-205ENST00000467114 ADGRG3Q86Y34 549 aa6.13□□□□□ -1.43
PRPF40A-205ENST00000467114 SUPT20HQ8NEM7 779 aa6.13□□□□□ -1.43
PRPF40A-205ENST00000467114 LINC00476Q8WZB0 136 aa6.13□□□□□ -1.43
PRPF40A-205ENST00000467114 BBC3Q96PG8 261 aaPredicted RBP6.13□□□□□ -1.43
PRPF40A-205ENST00000467114 TEX101Q9BY14 249 aa6.13□□□□□ -1.43
PRPF40A-205ENST00000467114 PUS7LQ9H0K6 701 aaKnown RBP6.13□□□□□ -1.43
PRPF40A-205ENST00000467114 GPRC5DQ9NZD1 345 aa6.13□□□□□ -1.43
PRPF40A-205ENST00000467114 EPN1Q9Y6I3 576 aaPredicted RBP6.13□□□□□ -1.43
PRPF40A-205ENST00000467114 MARCH11A6NNE9 402 aa6.12□□□□□ -1.43
PRPF40A-205ENST00000467114 KIAA0355O15063 1070 aa6.12□□□□□ -1.43
PRPF40A-205ENST00000467114 CLK3P49761 638 aaKnown RBP6.12□□□□□ -1.43
PRPF40A-205ENST00000467114 MTMR1Q13613 665 aa6.12□□□□□ -1.43
PRPF40A-205ENST00000467114 FAM102AQ5T9C2 384 aaPredicted RBP6.12□□□□□ -1.43
PRPF40A-205ENST00000467114 METRNLQ641Q3 311 aa6.12□□□□□ -1.43
PRPF40A-205ENST00000467114 EFCAB12Q6NXP0 572 aa6.12□□□□□ -1.43
PRPF40A-205ENST00000467114 LCORLQ8N3X6 602 aa6.12□□□□□ -1.43
PRPF40A-205ENST00000467114 CPEB3Q8NE35 698 aaKnown RBP6.12□□□□□ -1.43
PRPF40A-205ENST00000467114 ATL2Q8NHH9 583 aa6.12□□□□□ -1.43
PRPF40A-205ENST00000467114 PAWRQ96IZ0 340 aaKnown RBP6.12□□□□□ -1.43
PRPF40A-205ENST00000467114 KCTD10Q9H3F6 313 aa6.12□□□□□ -1.43
PRPF40A-205ENST00000467114 SLC5A4Q9NY91 659 aa6.12□□□□□ -1.43
PRPF40A-205ENST00000467114 POLR2AP24928 1970 aaKnown RBP6.11□□□□□ -1.43
PRPF40A-205ENST00000467114 PIPSLA2A3N6 862 aa6.11□□□□□ -1.43
PRPF40A-205ENST00000467114 SPATA31D3P0C874 917 aa6.11□□□□□ -1.43
PRPF40A-205ENST00000467114 TYRP1P17643 537 aa6.11□□□□□ -1.43
PRPF40A-205ENST00000467114 CRHR1P34998 444 aa6.11□□□□□ -1.43
PRPF40A-205ENST00000467114 GPR3P46089 330 aa6.11□□□□□ -1.43
PRPF40A-205ENST00000467114 GUCY1B3Q02153 619 aa6.11□□□□□ -1.43
PRPF40A-205ENST00000467114 FAPQ12884 760 aa6.11□□□□□ -1.43
PRPF40A-205ENST00000467114 STRIP1Q5VSL9 837 aa6.11□□□□□ -1.43
PRPF40A-205ENST00000467114 SPATA31D4Q6ZUB0 917 aa6.11□□□□□ -1.43
PRPF40A-205ENST00000467114 PDZD4Q76G19 769 aaPredicted RBP6.11□□□□□ -1.43
PRPF40A-205ENST00000467114 MDM1Q8TC05 714 aa6.11□□□□□ -1.43
PRPF40A-205ENST00000467114 TFAP2CQ92754 450 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms