RNA–Protein interactions for RNA: ENST00000466982.1

SFXN3-204, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-204ENST00000466982 DNAJC10Q8IXB1 793 aa11.79□□□□□ -0.52
SFXN3-204ENST00000466982 SYCE1Q8N0S2 351 aa11.79□□□□□ -0.52
SFXN3-204ENST00000466982 LNX1Q8TBB1 728 aaPredicted RBP11.79□□□□□ -0.52
SFXN3-204ENST00000466982 SCG3Q8WXD2 468 aaKnown RBP11.79□□□□□ -0.52
SFXN3-204ENST00000466982 RAD54LQ92698 747 aa11.79□□□□□ -0.52
SFXN3-204ENST00000466982 KRT35Q92764 455 aa11.79□□□□□ -0.52
SFXN3-204ENST00000466982 DNAJC19Q96DA6 116 aa11.79□□□□□ -0.52
SFXN3-204ENST00000466982 AGBL1Q96MI9 1066 aa11.79□□□□□ -0.52
SFXN3-204ENST00000466982 ZMAT2Q96NC0 199 aaKnown RBP11.79□□□□□ -0.52
SFXN3-204ENST00000466982 STMN4Q9H169 189 aaPredicted RBP11.79□□□□□ -0.52
SFXN3-204ENST00000466982 IL17RBQ9NRM6 502 aa11.79□□□□□ -0.52
SFXN3-204ENST00000466982 QPCTLQ9NXS2 382 aa11.79□□□□□ -0.52
SFXN3-204ENST00000466982 BARHL2Q9NY43 387 aa11.79□□□□□ -0.52
SFXN3-204ENST00000466982 SEC63Q9UGP8 760 aaKnown RBP11.79□□□□□ -0.52
SFXN3-204ENST00000466982 CHORDC1Q9UHD1 332 aaPredicted RBP11.79□□□□□ -0.52
SFXN3-204ENST00000466982 NENFQ9UMX5 172 aa11.79□□□□□ -0.52
SFXN3-204ENST00000466982 MROH5Q6ZUA9 1318 aa11.79□□□□□ -0.52
SFXN3-204ENST00000466982 BCL9O00512 1426 aa11.79□□□□□ -0.52
SFXN3-204ENST00000466982 CETPP11597 493 aa11.79□□□□□ -0.52
SFXN3-204ENST00000466982 NFKBIAP25963 317 aa11.79□□□□□ -0.52
SFXN3-204ENST00000466982 SH3BGRP55822 239 aaPredicted RBP11.79□□□□□ -0.52
SFXN3-204ENST00000466982 GPSM2P81274 684 aa11.79□□□□□ -0.52
SFXN3-204ENST00000466982 DNAJC3Q13217 504 aa11.79□□□□□ -0.52
SFXN3-204ENST00000466982 CNPY1Q3B7I2 92 aa11.79□□□□□ -0.52
SFXN3-204ENST00000466982 FAM26FQ5R3K3 315 aa11.79□□□□□ -0.52
SFXN3-204ENST00000466982 SNX30Q5VWJ9 437 aa11.79□□□□□ -0.52
SFXN3-204ENST00000466982 SLC2A7Q6PXP3 512 aa11.79□□□□□ -0.52
SFXN3-204ENST00000466982 DSTYKQ6XUX3 929 aa11.79□□□□□ -0.52
SFXN3-204ENST00000466982 AGGF1Q8N302 714 aaeCLIP11.79□□□□□ -0.52
SFXN3-204ENST00000466982 PWWP2AQ96N64 755 aa11.79□□□□□ -0.52
SFXN3-204ENST00000466982 TIPINQ9BVW5 301 aa11.79□□□□□ -0.52
SFXN3-204ENST00000466982 NRDE2Q9H7Z3 1164 aa11.79□□□□□ -0.52
SFXN3-204ENST00000466982 MTRF1LQ9UGC7 380 aaKnown RBP11.79□□□□□ -0.52
SFXN3-204ENST00000466982 MAD2L2Q9UI95 211 aa11.79□□□□□ -0.52
SFXN3-204ENST00000466982 MYPNQ86TC9 1320 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 SLC37A4O43826 429 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 CYP1A1P04798 512 aaPredicted RBP11.78□□□□□ -0.52
SFXN3-204ENST00000466982 ALDH2P05091 517 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 SPATA31D3P0C874 917 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 UBTFL6P0CB48 400 aaPredicted RBP11.78□□□□□ -0.52
SFXN3-204ENST00000466982 ZCCHC18P0CG32 403 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 GYG1P46976 350 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 DRG2P55039 364 aaKnown RBP11.78□□□□□ -0.52
SFXN3-204ENST00000466982 MTTPP55157 894 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 DHX34Q14147 1143 aaKnown RBP11.78□□□□□ -0.52
SFXN3-204ENST00000466982 NONOQ15233 471 aaKnown RBP eCLIP11.78□□□□□ -0.52
SFXN3-204ENST00000466982 SPATA31D4Q6ZUB0 917 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 PTF1AQ7RTS3 328 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 NEK8Q86SG6 692 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 PRUNE1Q86TP1 453 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 SCUBE1Q8IWY4 988 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 SRRM1Q8IYB3 904 aaKnown RBP11.78□□□□□ -0.52
SFXN3-204ENST00000466982 DTX3LQ8TDB6 740 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 LRRC8CQ8TDW0 803 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 SNX29Q8TEQ0 813 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 LRRC37BQ96QE4 947 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 NT5C3AQ9H0P0 336 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 CCDC87Q9NVE4 849 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 MKS1Q9NXB0 559 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 TAS2R14Q9NYV8 317 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 ASAP1Q9ULH1 1129 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 TMEM110-MUSTN1A8MSY1 372 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 RGL2O15211 777 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 PDE8AO60658 829 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 ETS2P15036 469 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 KCNA2P16389 499 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 POLGP54098 1239 aaPredicted RBP11.78□□□□□ -0.52
SFXN3-204ENST00000466982 NAPAP54920 295 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 GEMIN4P57678 1058 aaKnown RBP11.78□□□□□ -0.52
SFXN3-204ENST00000466982 PPATQ06203 517 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 CTTNQ14247 550 aaKnown RBP11.78□□□□□ -0.52
SFXN3-204ENST00000466982 RRP1BQ14684 758 aaKnown RBP11.78□□□□□ -0.52
SFXN3-204ENST00000466982 DCAF17Q5H9S7 520 aaPredicted RBP11.78□□□□□ -0.52
SFXN3-204ENST00000466982 CCDC137Q6PK04 289 aaKnown RBP11.78□□□□□ -0.52
SFXN3-204ENST00000466982 SLC7A5P1Q8MH63 180 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 OLIG1Q8TAK6 271 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 NAP1L3Q99457 506 aaPredicted RBP11.78□□□□□ -0.52
SFXN3-204ENST00000466982 AAASQ9NRG9 546 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 HDAC9Q9UKV0 1011 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 COG5Q9UP83 839 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 USP20Q9Y2K6 914 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 NUMBLQ9Y6R0 609 aa11.78□□□□□ -0.52
SFXN3-204ENST00000466982 COL14A1Q05707 1796 aaKnown RBP11.78□□□□□ -0.52
SFXN3-204ENST00000466982 USP17L3A6NCW0 530 aa11.77□□□□□ -0.53
SFXN3-204ENST00000466982 USP17L4A6NCW7 530 aa11.77□□□□□ -0.53
SFXN3-204ENST00000466982 SMCO2A6NFE2 343 aa11.77□□□□□ -0.53
SFXN3-204ENST00000466982 FAM196BA6NMK8 535 aa11.77□□□□□ -0.53
SFXN3-204ENST00000466982 KRT36O76013 467 aa11.77□□□□□ -0.53
SFXN3-204ENST00000466982 TDP2O95551 362 aa11.77□□□□□ -0.53
SFXN3-204ENST00000466982 CHKAP35790 457 aa11.77□□□□□ -0.53
SFXN3-204ENST00000466982 ERFP50548 548 aa11.77□□□□□ -0.53
SFXN3-204ENST00000466982 CCT8P50990 548 aa11.77□□□□□ -0.53
SFXN3-204ENST00000466982 CCDC6Q16204 474 aa11.77□□□□□ -0.53
SFXN3-204ENST00000466982 INAQ16352 499 aa11.77□□□□□ -0.53
SFXN3-204ENST00000466982 DDB1Q16531 1140 aa11.77□□□□□ -0.53
SFXN3-204ENST00000466982 BCL2A1Q16548 175 aa11.77□□□□□ -0.53
SFXN3-204ENST00000466982 USP17L1Q7RTZ2 530 aa11.77□□□□□ -0.53
SFXN3-204ENST00000466982 ANKRD13BQ86YJ7 626 aa11.77□□□□□ -0.53
SFXN3-204ENST00000466982 SCFD1Q8WVM8 642 aa11.77□□□□□ -0.53
SFXN3-204ENST00000466982 ABTB1Q969K4 478 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms