RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 RNF26Q9BY78 433 aaPredicted RBP6.35□□□□□ -1.39
CXXC4-202ENST00000466963 ZDHHC5Q9C0B5 715 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 GABBR1Q9UBS5 961 aa6.35□□□□□ -1.39
CXXC4-202ENST00000466963 SPTBN5Q9NRC6 3674 aaKnown RBP6.35□□□□□ -1.39
CXXC4-202ENST00000466963 TDRD15B5MCY1 1934 aaKnown RBP6.35□□□□□ -1.39
CXXC4-202ENST00000466963 CNTNAP5Q8WYK1 1306 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 DDX11L8A8MPP1 907 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 ZNF263O14978 683 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 CHGBP05060 677 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 PRR29P0C7W0 189 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 ELF1P32519 619 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 PTENP60484 403 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 FCHO2Q0JRZ9 810 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 ARHGAP15Q53QZ3 475 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 JAKMIP3Q5VZ66 844 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 IQCEQ6IPM2 695 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 SLC8B1Q6J4K2 584 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 CEP68Q76N32 757 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 CYB5R4Q7L1T6 521 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 MIER3Q7Z3K6 550 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 YAF2Q8IY57 180 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 GLIS3Q8NEA6 775 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 APPL2Q8NEU8 664 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 ZKSCAN3Q9BRR0 538 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 CACNA2D2Q9NY47 1150 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 SZT2Q5T011 3432 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 SMCO2A6NFE2 343 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 LRG1P02750 347 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 ARP10275 920 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 ATP4AP20648 1035 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 TARSP26639 723 aaKnown RBP6.34□□□□□ -1.39
CXXC4-202ENST00000466963 EFNA5P52803 228 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 AKAP17AQ02040 695 aaKnown RBP6.34□□□□□ -1.39
CXXC4-202ENST00000466963 EPHA7Q15375 998 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 PSMD5Q16401 504 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 N4BP2L1Q5TBK1 243 aaPredicted RBP6.34□□□□□ -1.39
CXXC4-202ENST00000466963 STPG1Q5TH74 334 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 PEAR1Q5VY43 1037 aaPredicted RBP6.34□□□□□ -1.39
CXXC4-202ENST00000466963 MCPH1Q8NEM0 835 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 FGF13Q92913 245 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 ADPGKQ9BRR6 497 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 ADAM33Q9BZ11 813 aa6.34□□□□□ -1.39
CXXC4-202ENST00000466963 MRPS23Q9Y3D9 190 aaKnown RBP6.34□□□□□ -1.39
CXXC4-202ENST00000466963 TADA2AO75478 443 aa6.34□□□□□ -1.4
CXXC4-202ENST00000466963 DGAT1O75907 488 aa6.34□□□□□ -1.4
CXXC4-202ENST00000466963 C8AP07357 584 aa6.34□□□□□ -1.4
CXXC4-202ENST00000466963 QARSP47897 775 aaKnown RBP6.34□□□□□ -1.4
CXXC4-202ENST00000466963 AK2P54819 239 aa6.34□□□□□ -1.4
CXXC4-202ENST00000466963 MYBPC2Q14324 1141 aa6.34□□□□□ -1.4
CXXC4-202ENST00000466963 NOLC1Q14978 699 aaKnown RBP eCLIP6.34□□□□□ -1.4
CXXC4-202ENST00000466963 PDGFRLQ15198 375 aa6.34□□□□□ -1.4
CXXC4-202ENST00000466963 RTN1Q16799 776 aa6.34□□□□□ -1.4
CXXC4-202ENST00000466963 GET4Q7L5D6 327 aaPredicted RBP6.34□□□□□ -1.4
CXXC4-202ENST00000466963 DHX32Q7L7V1 743 aaKnown RBP6.34□□□□□ -1.4
CXXC4-202ENST00000466963 KRT25Q7Z3Z0 450 aa6.34□□□□□ -1.4
CXXC4-202ENST00000466963 NPAS3Q8IXF0 933 aa6.34□□□□□ -1.4
CXXC4-202ENST00000466963 SRBD1Q8N5C6 995 aaKnown RBP6.34□□□□□ -1.4
CXXC4-202ENST00000466963 UBL7Q96S82 380 aaPredicted RBP6.34□□□□□ -1.4
CXXC4-202ENST00000466963 BRD9Q9H8M2 597 aa6.34□□□□□ -1.4
CXXC4-202ENST00000466963 KIAA1522Q9P206 1035 aaPredicted RBP6.34□□□□□ -1.4
CXXC4-202ENST00000466963 NFE2L3Q9Y4A8 694 aa6.34□□□□□ -1.4
CXXC4-202ENST00000466963 FAM186AA6NE01 2351 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 XPOTO43592 962 aaKnown RBP6.33□□□□□ -1.4
CXXC4-202ENST00000466963 NARSO43776 548 aaKnown RBP6.33□□□□□ -1.4
CXXC4-202ENST00000466963 PSMD10O75832 226 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 ABLIM3O94929 683 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 BAG4O95429 457 aaKnown RBP6.33□□□□□ -1.4
CXXC4-202ENST00000466963 VTNP04004 478 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 NTRK1P04629 796 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 CHRNB1P11230 501 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 CA8P35219 290 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 FZD5Q13467 585 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 TMEM266Q2M3C6 531 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 SLC35G1Q2M3R5 365 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 PRSS36Q5K4E3 855 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 SPECC1Q5M775 1068 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 HEATR3Q7Z4Q2 680 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 ZBTB8OSQ8IWT0 167 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 RIN2Q8WYP3 895 aaPredicted RBP6.33□□□□□ -1.4
CXXC4-202ENST00000466963 GATA6Q92908 595 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 VN1R3Q9BXE9 311 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 ZNF334Q9HCZ1 680 aaPredicted RBP6.33□□□□□ -1.4
CXXC4-202ENST00000466963 AFF4Q9UHB7 1163 aaKnown RBP6.33□□□□□ -1.4
CXXC4-202ENST00000466963 PLXND1Q9Y4D7 1925 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 WDR27A2RRH5 827 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 OR6C75A6NL08 312 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 H0YCG3 227 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 PRC1O43663 620 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 ZNF883P0CG24 379 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 XBP1P17861 261 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 GPC5P78333 572 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 MTERF2Q49AM1 385 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 UBXN11Q5T124 520 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 LRCH2Q5VUJ6 765 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 CPLX2Q6PUV4 134 aaKnown RBP6.33□□□□□ -1.4
CXXC4-202ENST00000466963 PLEKHM2Q8IWE5 1019 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 ZNF461Q8TAF7 563 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 RILPL2Q969X0 211 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 ZSWIM4Q9H7M6 989 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 CDHR5Q9HBB8 845 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms