RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 TSPYL6Q8N831 410 aa3.89□□□□□ -1.79
SORT1-202ENST00000466471 CCDC112Q8NEF3 446 aa3.89□□□□□ -1.79
SORT1-202ENST00000466471 SHKBP1Q8TBC3 707 aa3.89□□□□□ -1.79
SORT1-202ENST00000466471 BAHD1Q8TBE0 780 aaPredicted RBP3.89□□□□□ -1.79
SORT1-202ENST00000466471 RAET1EQ8TD07 263 aa3.89□□□□□ -1.79
SORT1-202ENST00000466471 BTN2A2Q8WVV5 523 aa3.89□□□□□ -1.79
SORT1-202ENST00000466471 RTF1Q92541 710 aaKnown RBP3.89□□□□□ -1.79
SORT1-202ENST00000466471 GJA10Q969M2 543 aa3.89□□□□□ -1.79
SORT1-202ENST00000466471 CLIP3Q96DZ5 547 aa3.89□□□□□ -1.79
SORT1-202ENST00000466471 WDR89Q96FK6 387 aaPredicted RBP3.89□□□□□ -1.79
SORT1-202ENST00000466471 FUBP3Q96I24 572 aaKnown RBP eCLIP3.89□□□□□ -1.79
SORT1-202ENST00000466471 ZNF512BQ96KM6 892 aaPredicted RBP3.89□□□□□ -1.79
SORT1-202ENST00000466471 FANCD2OSQ96PS1 177 aa3.89□□□□□ -1.79
SORT1-202ENST00000466471 CRAMP1Q96RY5 1269 aa3.89□□□□□ -1.79
SORT1-202ENST00000466471 STRBPQ96SI9 672 aaKnown RBP3.89□□□□□ -1.79
SORT1-202ENST00000466471 ELAC2Q9BQ52 826 aaKnown RBP3.89□□□□□ -1.79
SORT1-202ENST00000466471 BPIFA3Q9BQP9 254 aa3.89□□□□□ -1.79
SORT1-202ENST00000466471 TMPRSS13Q9BYE2 586 aa3.89□□□□□ -1.79
SORT1-202ENST00000466471 SCAND2PQ9GZW5 306 aaPredicted RBP3.89□□□□□ -1.79
SORT1-202ENST00000466471 CCDC8Q9H0W5 538 aaPredicted RBP3.89□□□□□ -1.79
SORT1-202ENST00000466471 C11orf49Q9H6J7 331 aa3.89□□□□□ -1.79
SORT1-202ENST00000466471 CYP4F12Q9HCS2 524 aa3.89□□□□□ -1.79
SORT1-202ENST00000466471 EMC7Q9NPA0 242 aa3.89□□□□□ -1.79
SORT1-202ENST00000466471 GPR27Q9NS67 375 aa3.89□□□□□ -1.79
SORT1-202ENST00000466471 C1orf112Q9NSG2 853 aa3.89□□□□□ -1.79
SORT1-202ENST00000466471 POLKQ9UBT6 870 aa3.89□□□□□ -1.79
SORT1-202ENST00000466471 LIMCH1Q9UPQ0 1083 aa3.89□□□□□ -1.79
SORT1-202ENST00000466471 MTMR6Q9Y217 621 aa3.89□□□□□ -1.79
SORT1-202ENST00000466471 MRFAP1Q9Y605 127 aa3.89□□□□□ -1.79
SORT1-202ENST00000466471 COL4A6Q14031 1691 aa3.89□□□□□ -1.79
SORT1-202ENST00000466471 GBF1Q92538 1859 aa3.89□□□□□ -1.79
SORT1-202ENST00000466471 AK9Q5TCS8 1911 aa3.89□□□□□ -1.79
SORT1-202ENST00000466471 SIPA1L3O60292 1781 aaPredicted RBP3.89□□□□□ -1.79
SORT1-202ENST00000466471 NUP98P52948 1817 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 LOC400499M0QZD8 3231 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 CNOT1A5YKK6 2376 aaKnown RBP3.88□□□□□ -1.79
SORT1-202ENST00000466471 RLFQ13129 1914 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 A0A0U1RQG5 324 aaPredicted RBP3.88□□□□□ -1.79
SORT1-202ENST00000466471 WDR64B1ANS9 1081 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 PROB1E7EW31 1015 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 MAP2K7O14733 419 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 SGSM2O43147 1006 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 TBX1O43435 398 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 HTATSF1O43719 755 aaKnown RBP3.88□□□□□ -1.79
SORT1-202ENST00000466471 MYO1BO43795 1136 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 WDHD1O75717 1129 aaPredicted RBP3.88□□□□□ -1.79
SORT1-202ENST00000466471 KCNH1O95259 989 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 COL6A1P12109 1028 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 HOXD10P28358 340 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 IL6STP40189 918 aaPredicted RBP3.88□□□□□ -1.79
SORT1-202ENST00000466471 KCNJ4P48050 445 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 PREPP48147 710 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 MECP2P51608 486 aaKnown RBP3.88□□□□□ -1.79
SORT1-202ENST00000466471 HNRNPH2P55795 449 aaKnown RBP3.88□□□□□ -1.79
SORT1-202ENST00000466471 PHC1P78364 1004 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 POU4F1Q01851 419 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 NKG7Q16617 165 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 INO80DQ53TQ3 878 aaPredicted RBP3.88□□□□□ -1.79
SORT1-202ENST00000466471 NOL9Q5SY16 702 aaKnown RBP3.88□□□□□ -1.79
SORT1-202ENST00000466471 PRAMEF13Q5VWM6 474 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 IQCEQ6IPM2 695 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 ZNF771Q7L3S4 317 aaPredicted RBP3.88□□□□□ -1.79
SORT1-202ENST00000466471 CCDC186Q7Z3E2 898 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 SRGAP1Q7Z6B7 1085 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 CLEC10AQ8IUN9 316 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 ELOA2Q8IYF1 753 aaPredicted RBP3.88□□□□□ -1.79
SORT1-202ENST00000466471 CCAR2Q8N163 923 aaKnown RBP3.88□□□□□ -1.79
SORT1-202ENST00000466471 TXLNBQ8N3L3 684 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 EFHBQ8N7U6 833 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 C8orf58Q8NAV2 365 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 TMEM145Q8NBT3 493 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 CHST14Q8NCH0 376 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 SMG8Q8ND04 991 aaKnown RBP3.88□□□□□ -1.79
SORT1-202ENST00000466471 C1orf162Q8NEQ5 155 aaPredicted RBP3.88□□□□□ -1.79
SORT1-202ENST00000466471 DNAJB8Q8NHS0 232 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 USP33Q8TEY7 942 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 PPP1R13LQ8WUF5 828 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 CACTINQ8WUQ7 758 aaKnown RBP3.88□□□□□ -1.79
SORT1-202ENST00000466471 COPS5Q92905 334 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 EXOC4Q96A65 974 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 AHCYL2Q96HN2 611 aaKnown RBP3.88□□□□□ -1.79
SORT1-202ENST00000466471 ZNF496Q96IT1 587 aaPredicted RBP3.88□□□□□ -1.79
SORT1-202ENST00000466471 CLMNQ96JQ2 1002 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 KREMEN1Q96MU8 473 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 FAM83CQ9BQN1 747 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 SELENOOQ9BVL4 669 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 LSG1Q9H089 658 aaKnown RBP3.88□□□□□ -1.79
SORT1-202ENST00000466471 CLSTN2Q9H4D0 955 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 ZCCHC17Q9NP64 241 aaKnown RBP3.88□□□□□ -1.79
SORT1-202ENST00000466471 CD320Q9NPF0 282 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 DISC1Q9NRI5 854 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 ZNF446Q9NWS9 450 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 HYPKQ9NX55 129 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 IP6K2Q9UHH9 426 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 ZNF652Q9Y2D9 606 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 ATP6V0A2Q9Y487 856 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 CSADQ9Y600 493 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 NBEAQ8NFP9 2946 aa3.88□□□□□ -1.79
SORT1-202ENST00000466471 OTOGLQ3ZCN5 2332 aa3.87□□□□□ -1.79
SORT1-202ENST00000466471 TRBV23OR9-2A0A075B6M9 112 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms