RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 TNFSF13BQ9Y275 285 aa11.18□□□□□ -0.62
CD40-204ENST00000466205 C2orf71A6NGG8 1288 aa11.17□□□□□ -0.62
CD40-204ENST00000466205 MYMKA6NI61 221 aa11.17□□□□□ -0.62
CD40-204ENST00000466205 TULP1O00294 542 aaPredicted RBP11.17□□□□□ -0.62
CD40-204ENST00000466205 PTGESO14684 152 aa11.17□□□□□ -0.62
CD40-204ENST00000466205 SLC26A4O43511 780 aa11.17□□□□□ -0.62
CD40-204ENST00000466205 TRAK2O60296 914 aa11.17□□□□□ -0.62
CD40-204ENST00000466205 MYBP10242 640 aa11.17□□□□□ -0.62
CD40-204ENST00000466205 MAPTP10636 758 aaKnown RBP11.17□□□□□ -0.62
CD40-204ENST00000466205 NCKAP1LP55160 1127 aa11.17□□□□□ -0.62
CD40-204ENST00000466205 GRIK3Q13003 919 aa11.17□□□□□ -0.62
CD40-204ENST00000466205 CTC1Q2NKJ3 1217 aa11.17□□□□□ -0.62
CD40-204ENST00000466205 ZC2HC1CQ53FD0 456 aaPredicted RBP11.17□□□□□ -0.62
CD40-204ENST00000466205 HAUS6Q7Z4H7 955 aa11.17□□□□□ -0.62
CD40-204ENST00000466205 DDX53Q86TM3 631 aaKnown RBP11.17□□□□□ -0.62
CD40-204ENST00000466205 SFR1Q86XK3 245 aa11.17□□□□□ -0.62
CD40-204ENST00000466205 TMEM130Q8N3G9 435 aa11.17□□□□□ -0.62
CD40-204ENST00000466205 KCTD17Q8N5Z5 321 aa11.17□□□□□ -0.62
CD40-204ENST00000466205 EFHBQ8N7U6 833 aa11.17□□□□□ -0.62
CD40-204ENST00000466205 TMEM87AQ8NBN3 555 aa11.17□□□□□ -0.62
CD40-204ENST00000466205 SPIRE2Q8WWL2 714 aa11.17□□□□□ -0.62
CD40-204ENST00000466205 DHX58Q96C10 678 aa11.17□□□□□ -0.62
CD40-204ENST00000466205 IKZF4Q9H2S9 585 aa11.17□□□□□ -0.62
CD40-204ENST00000466205 PARVGQ9HBI0 331 aa11.17□□□□□ -0.62
CD40-204ENST00000466205 GOLGA2P5Q9HBQ8 144 aa11.17□□□□□ -0.62
CD40-204ENST00000466205 CLEC1BQ9P126 229 aa11.17□□□□□ -0.62
CD40-204ENST00000466205 ODF2LQ9ULJ1 636 aa11.17□□□□□ -0.62
CD40-204ENST00000466205 RBM19Q9Y4C8 960 aaKnown RBP11.17□□□□□ -0.62
CD40-204ENST00000466205 VCANP13611 3396 aa11.17□□□□□ -0.62
CD40-204ENST00000466205 TDRD15B5MCY1 1934 aaKnown RBP11.16□□□□□ -0.62
CD40-204ENST00000466205 PPP6R2O75170 966 aa11.16□□□□□ -0.62
CD40-204ENST00000466205 NR1I2O75469 434 aa11.16□□□□□ -0.62
CD40-204ENST00000466205 YEATS4O95619 227 aa11.16□□□□□ -0.62
CD40-204ENST00000466205 THP07101 528 aa11.16□□□□□ -0.62
CD40-204ENST00000466205 CTSAP10619 480 aa11.16□□□□□ -0.62
CD40-204ENST00000466205 IDEP14735 1019 aa11.16□□□□□ -0.62
CD40-204ENST00000466205 IGFBP6P24592 240 aaPredicted RBP11.16□□□□□ -0.62
CD40-204ENST00000466205 ME1P48163 572 aa11.16□□□□□ -0.62
CD40-204ENST00000466205 SPAG1Q07617 926 aa11.16□□□□□ -0.62
CD40-204ENST00000466205 DSC1Q08554 894 aa11.16□□□□□ -0.62
CD40-204ENST00000466205 SHC4Q6S5L8 630 aa11.16□□□□□ -0.62
CD40-204ENST00000466205 MPZL3Q6UWV2 235 aa11.16□□□□□ -0.62
CD40-204ENST00000466205 CCDC73Q6ZRK6 1079 aa11.16□□□□□ -0.62
CD40-204ENST00000466205 SV2BQ7L1I2 683 aa11.16□□□□□ -0.62
CD40-204ENST00000466205 GLYCTKQ8IVS8 523 aa11.16□□□□□ -0.62
CD40-204ENST00000466205 FAM178BQ8IXR5 827 aa11.16□□□□□ -0.62
CD40-204ENST00000466205 MRPL43Q8N983 215 aaKnown RBP11.16□□□□□ -0.62
CD40-204ENST00000466205 RSPH1Q8WYR4 309 aa11.16□□□□□ -0.62
CD40-204ENST00000466205 DDX12PQ92771 950 aa11.16□□□□□ -0.62
CD40-204ENST00000466205 NTPCRQ9BSD7 190 aaKnown RBP11.16□□□□□ -0.62
CD40-204ENST00000466205 CCDC94Q9BW85 323 aaPredicted RBP11.16□□□□□ -0.62
CD40-204ENST00000466205 HAPLN2Q9GZV7 340 aa11.16□□□□□ -0.62
CD40-204ENST00000466205 PTPRHQ9HD43 1115 aa11.16□□□□□ -0.62
CD40-204ENST00000466205 NGRNQ9NPE2 291 aaKnown RBP11.16□□□□□ -0.62
CD40-204ENST00000466205 STK17AQ9UEE5 414 aa11.16□□□□□ -0.62
CD40-204ENST00000466205 CDH22Q9UJ99 828 aa11.16□□□□□ -0.62
CD40-204ENST00000466205 ZDHHC9Q9Y397 364 aa11.16□□□□□ -0.62
CD40-204ENST00000466205 GRXCR2A6NFK2 248 aa11.15□□□□□ -0.62
CD40-204ENST00000466205 TISP43B9A030 160 aa11.15□□□□□ -0.62
CD40-204ENST00000466205 ABLIM1O14639 778 aa11.15□□□□□ -0.62
CD40-204ENST00000466205 INPPL1O15357 1258 aa11.15□□□□□ -0.62
CD40-204ENST00000466205 MBTPS2O43462 519 aa11.15□□□□□ -0.62
CD40-204ENST00000466205 NCK2O43639 380 aa11.15□□□□□ -0.62
CD40-204ENST00000466205 CUTAO60888 179 aa11.15□□□□□ -0.62
CD40-204ENST00000466205 CLASP2O75122 1294 aaKnown RBP11.15□□□□□ -0.62
CD40-204ENST00000466205 TADA2AO75478 443 aa11.15□□□□□ -0.62
CD40-204ENST00000466205 KIF4AO95239 1232 aa11.15□□□□□ -0.62
CD40-204ENST00000466205 TNFSF9P41273 254 aa11.15□□□□□ -0.62
CD40-204ENST00000466205 GRM5P41594 1212 aa11.15□□□□□ -0.62
CD40-204ENST00000466205 LIG4P49917 911 aa11.15□□□□□ -0.62
CD40-204ENST00000466205 ZNF131P52739 623 aa11.15□□□□□ -0.62
CD40-204ENST00000466205 YARSP54577 528 aaKnown RBP11.15□□□□□ -0.62
CD40-204ENST00000466205 TUSC3Q13454 348 aa11.15□□□□□ -0.62
CD40-204ENST00000466205 COL19A1Q14993 1142 aa11.15□□□□□ -0.62
CD40-204ENST00000466205 PTPN14Q15678 1187 aa11.15□□□□□ -0.62
CD40-204ENST00000466205 PDE12Q6L8Q7 609 aaKnown RBP11.15□□□□□ -0.62
CD40-204ENST00000466205 KANK3Q6NY19 840 aa11.15□□□□□ -0.62
CD40-204ENST00000466205 CEP57Q86XR8 500 aa11.15□□□□□ -0.62
CD40-204ENST00000466205 FIZ1Q96SL8 496 aa11.15□□□□□ -0.62
CD40-204ENST00000466205 COLEC11Q9BWP8 271 aa11.15□□□□□ -0.62
CD40-204ENST00000466205 GPR62Q9BZJ7 368 aa11.15□□□□□ -0.62
CD40-204ENST00000466205 CD207Q9UJ71 328 aa11.15□□□□□ -0.62
CD40-204ENST00000466205 TBX20Q9UMR3 447 aa11.15□□□□□ -0.62
CD40-204ENST00000466205 PCDHA7Q9UN72 937 aa11.15□□□□□ -0.62
CD40-204ENST00000466205 HCFC2Q9Y5Z7 792 aa11.15□□□□□ -0.62
CD40-204ENST00000466205 MYH11P35749 1972 aa11.15□□□□□ -0.62
CD40-204ENST00000466205 TRANK1O15050 2925 aa11.15□□□□□ -0.63
CD40-204ENST00000466205 SPDYE4A6NLX3 237 aa11.14□□□□□ -0.63
CD40-204ENST00000466205 TNFRSF10AO00220 468 aa11.14□□□□□ -0.63
CD40-204ENST00000466205 HNRNPDLO14979 420 aaKnown RBP11.14□□□□□ -0.63
CD40-204ENST00000466205 CLDN3O15551 220 aa11.14□□□□□ -0.63
CD40-204ENST00000466205 MEFVO15553 781 aaPredicted RBP11.14□□□□□ -0.63
CD40-204ENST00000466205 TOM1L1O75674 476 aa11.14□□□□□ -0.63
CD40-204ENST00000466205 BRD1O95696 1058 aa11.14□□□□□ -0.63
CD40-204ENST00000466205 SOD2P04179 222 aa11.14□□□□□ -0.63
CD40-204ENST00000466205 URODP06132 367 aa11.14□□□□□ -0.63
CD40-204ENST00000466205 WEE2P0C1S8 567 aa11.14□□□□□ -0.63
CD40-204ENST00000466205 CXCL8P10145 99 aa11.14□□□□□ -0.63
CD40-204ENST00000466205 MCF2P10911 925 aa11.14□□□□□ -0.63
CD40-204ENST00000466205 EPCAMP16422 314 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms