RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 TFAP4Q01664 338 aa5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 CCL14Q16627 93 aa5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 VMACQ2NL98 169 aa5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 PLEKHN1Q494U1 663 aaPredicted RBP5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 SLC9C1Q4G0N8 1177 aa5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 FAM83BQ5T0W9 1011 aa5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 CNKSR3Q6P9H4 555 aa5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 LBX2Q6XYB7 198 aa5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 LRRC47Q8N1G4 583 aaKnown RBP5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 REPS2Q8NFH8 660 aa5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 USP6NLQ92738 828 aa5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 MKL1Q969V6 931 aa5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 ARMC5Q96C12 935 aa5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 CCDC17Q96LX7 622 aa5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 TANGO6Q9C0B7 1094 aa5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 NOL6Q9H6R4 1146 aaKnown RBP5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 KANSL2Q9H9L4 492 aa5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 FLRT1Q9NZU1 646 aa5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 NYAP2Q9P242 653 aa5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 ZNF214Q9UL59 606 aaPredicted RBP5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 ZMYM6O95789 1325 aa5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 ZNF236Q9UL36 1845 aa5.67□□□□□ -1.5
EXOSC3-204ENST00000465860 MYH6P13533 1939 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 A0A1W2PQ27 194 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 A0A1W2PQ64 194 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 A0A1W2PQC6 194 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 A0A1W2PQD8 194 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 F5H6K3 240 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 CBFA2T2O43439 604 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 ORC4O43929 436 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 BUB1BO60566 1050 aaPredicted RBP5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 FLOT1O75955 427 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 NDUFB10O96000 172 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 ITGA4P13612 1032 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 IFNGR1P15260 489 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 NOP2P46087 812 aaKnown RBP5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 MFAP1P55081 439 aaKnown RBP5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 SNAP25P60880 206 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 KLRC3Q07444 240 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 PAK2Q13177 524 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 PABPC4Q13310 644 aaKnown RBP eCLIP5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 COG2Q14746 738 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 KIF22Q14807 665 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 TMEM132BQ14DG7 1078 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 RCSD1Q6JBY9 416 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 CYP2R1Q6VVX0 501 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 GPR142Q7Z601 462 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 JAMLQ86YT9 394 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 AMOTL1Q8IY63 956 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 ZNF444Q8N0Y2 327 aaPredicted RBP5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 GPRC5AQ8NFJ5 357 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 TRIB2Q92519 343 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 RELTQ969Z4 430 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 MOV10L1Q9BXT6 1211 aaKnown RBP5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 NACAP1Q9BZK3 213 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 DIAPH3Q9NSV4 1193 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 ADAMTS5Q9UNA0 930 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 RABGAP1Q9Y3P9 1069 aa5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 RANBP2P49792 3224 aaKnown RBP5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 BAZ2BQ9UIF8 2168 aaKnown RBP5.66□□□□□ -1.5
EXOSC3-204ENST00000465860 WDR46O15213 610 aaKnown RBP5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 SGSM2O43147 1006 aa5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 RANBP6O60518 1105 aaKnown RBP5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 TTLL1O95922 423 aa5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 CD3EP07766 207 aa5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 DBHP09172 617 aa5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 TSPY3P0CV98 308 aa5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 TSPY8P0CW00 308 aa5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 CCL5P13501 91 aa5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 CYP2B6P20813 491 aa5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 NOVP48745 357 aa5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 MAPKAPK2P49137 400 aa5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 ZNF200P98182 395 aaPredicted RBP5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 NR1I3Q14994 352 aa5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 RRP12Q5JTH9 1297 aaKnown RBP5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 AKNAD1Q5T1N1 836 aa5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 ZC3H14Q6PJT7 736 aaKnown RBP5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 STOX1Q6ZVD7 989 aa5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 KCTD1Q719H9 257 aa5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 CENPQQ7L2Z9 268 aaPredicted RBP5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 TICAM2Q86XR7 235 aa5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 NPLOC4Q8TAT6 608 aa5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 RAET1EQ8TD07 263 aa5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 STAG1Q8WVM7 1258 aa5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 LPAR1Q92633 364 aa5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 PTCHD1Q96NR3 888 aa5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 KRTAP4-11Q9BYQ6 195 aa5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 SPATC1LQ9H0A9 340 aa5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 XYLT2Q9H1B5 865 aa5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 SF3B6Q9Y3B4 125 aaKnown RBP5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 RIPK3Q9Y572 518 aa5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 HCFC2Q9Y5Z7 792 aa5.65□□□□□ -1.5
EXOSC3-204ENST00000465860 OTOL1A6NHN0 477 aaPredicted RBP5.64□□□□□ -1.51
EXOSC3-204ENST00000465860 TSPY2A6NKD2 308 aa5.64□□□□□ -1.51
EXOSC3-204ENST00000465860 B4E1Z4 1266 aa5.64□□□□□ -1.51
EXOSC3-204ENST00000465860 TMEM232C9JQI7 657 aa5.64□□□□□ -1.51
EXOSC3-204ENST00000465860 VWA5AO00534 786 aa5.64□□□□□ -1.51
EXOSC3-204ENST00000465860 PGK2P07205 417 aa5.64□□□□□ -1.51
EXOSC3-204ENST00000465860 CYP21A2P08686 494 aa5.64□□□□□ -1.51
EXOSC3-204ENST00000465860 MCCP23508 829 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms