RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 DPP7Q9UHL4 492 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 ADAM28Q9UKQ2 775 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 USP20Q9Y2K6 914 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 GIT1Q9Y2X7 761 aa11.47□□□□□ -0.57
GPNMB-206ENST00000465673 FRYLO94915 3013 aa11.46□□□□□ -0.57
GPNMB-206ENST00000465673 CASTOR2A6NHX0 329 aa11.46□□□□□ -0.57
GPNMB-206ENST00000465673 CCL16O15467 120 aa11.46□□□□□ -0.57
GPNMB-206ENST00000465673 NR1I2O75469 434 aa11.46□□□□□ -0.57
GPNMB-206ENST00000465673 AXLP30530 894 aa11.46□□□□□ -0.57
GPNMB-206ENST00000465673 ARL2P36404 184 aa11.46□□□□□ -0.57
GPNMB-206ENST00000465673 STARD6P59095 220 aa11.46□□□□□ -0.57
GPNMB-206ENST00000465673 FAM171A1Q5VUB5 890 aa11.46□□□□□ -0.57
GPNMB-206ENST00000465673 GALNT17Q6IS24 598 aa11.46□□□□□ -0.57
GPNMB-206ENST00000465673 ELMSAN1Q6PJG2 1045 aa11.46□□□□□ -0.57
GPNMB-206ENST00000465673 CENPQQ7L2Z9 268 aaPredicted RBP11.46□□□□□ -0.57
GPNMB-206ENST00000465673 CEP57Q86XR8 500 aa11.46□□□□□ -0.57
GPNMB-206ENST00000465673 EXOC8Q8IYI6 725 aa11.46□□□□□ -0.57
GPNMB-206ENST00000465673 SUMF1Q8NBK3 374 aa11.46□□□□□ -0.57
GPNMB-206ENST00000465673 RUBCNQ92622 972 aa11.46□□□□□ -0.57
GPNMB-206ENST00000465673 FGF13Q92913 245 aa11.46□□□□□ -0.57
GPNMB-206ENST00000465673 EIF2AK1Q9BQI3 630 aaKnown RBP11.46□□□□□ -0.57
GPNMB-206ENST00000465673 ZSWIM4Q9H7M6 989 aa11.46□□□□□ -0.57
GPNMB-206ENST00000465673 GPRC5CQ9NQ84 441 aa11.46□□□□□ -0.57
GPNMB-206ENST00000465673 HCFC1R1Q9NWW0 138 aa11.46□□□□□ -0.57
GPNMB-206ENST00000465673 FNIP2Q9P278 1114 aa11.46□□□□□ -0.57
GPNMB-206ENST00000465673 POLIQ9UNA4 740 aa11.46□□□□□ -0.57
GPNMB-206ENST00000465673 PPME1Q9Y570 386 aa11.46□□□□□ -0.57
GPNMB-206ENST00000465673 TDRD15B5MCY1 1934 aaKnown RBP11.46□□□□□ -0.58
GPNMB-206ENST00000465673 MTCL1Q9Y4B5 1905 aaKnown RBP11.46□□□□□ -0.58
GPNMB-206ENST00000465673 SPTBN2O15020 2390 aa11.45□□□□□ -0.58
GPNMB-206ENST00000465673 ARID2Q68CP9 1835 aa11.45□□□□□ -0.58
GPNMB-206ENST00000465673 WNT7AO00755 349 aa11.45□□□□□ -0.58
GPNMB-206ENST00000465673 KIF4AO95239 1232 aa11.45□□□□□ -0.58
GPNMB-206ENST00000465673 NCBP1Q09161 790 aaKnown RBP11.45□□□□□ -0.58
GPNMB-206ENST00000465673 SCRN1Q12765 414 aa11.45□□□□□ -0.58
GPNMB-206ENST00000465673 GRIK3Q13003 919 aa11.45□□□□□ -0.58
GPNMB-206ENST00000465673 TFDP1Q14186 410 aa11.45□□□□□ -0.58
GPNMB-206ENST00000465673 HSP90AA2PQ14568 343 aaPredicted RBP11.45□□□□□ -0.58
GPNMB-206ENST00000465673 MXD4Q14582 209 aaPredicted RBP11.45□□□□□ -0.58
GPNMB-206ENST00000465673 UBXN2BQ14CS0 331 aa11.45□□□□□ -0.58
GPNMB-206ENST00000465673 RSPO4Q2I0M5 234 aaPredicted RBP11.45□□□□□ -0.58
GPNMB-206ENST00000465673 SLC44A4Q53GD3 710 aa11.45□□□□□ -0.58
GPNMB-206ENST00000465673 POTEHQ6S545 545 aa11.45□□□□□ -0.58
GPNMB-206ENST00000465673 IFNLR1Q8IU57 520 aaPredicted RBP11.45□□□□□ -0.58
GPNMB-206ENST00000465673 LNX1Q8TBB1 728 aaPredicted RBP11.45□□□□□ -0.58
GPNMB-206ENST00000465673 PIGOQ8TEQ8 1089 aa11.45□□□□□ -0.58
GPNMB-206ENST00000465673 ING5Q8WYH8 240 aa11.45□□□□□ -0.58
GPNMB-206ENST00000465673 CCDC51Q96ER9 411 aa11.45□□□□□ -0.58
GPNMB-206ENST00000465673 ZNF274Q96GC6 653 aaPredicted RBP11.45□□□□□ -0.58
GPNMB-206ENST00000465673 KXD1Q9BQD3 176 aa11.45□□□□□ -0.58
GPNMB-206ENST00000465673 POLR3FQ9H1D9 316 aaPredicted RBP11.45□□□□□ -0.58
GPNMB-206ENST00000465673 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.45□□□□□ -0.58
GPNMB-206ENST00000465673 SPATA6Q9NWH7 488 aaPredicted RBP11.45□□□□□ -0.58
GPNMB-206ENST00000465673 FBXW11Q9UKB1 542 aa11.45□□□□□ -0.58
GPNMB-206ENST00000465673 CDH7Q9ULB5 785 aa11.45□□□□□ -0.58
GPNMB-206ENST00000465673 A0A1B0GUA9 196 aa11.44□□□□□ -0.58
GPNMB-206ENST00000465673 KANSL1LA0AUZ9 987 aa11.44□□□□□ -0.58
GPNMB-206ENST00000465673 FAM170BA6NMN3 283 aa11.44□□□□□ -0.58
GPNMB-206ENST00000465673 PTGESO14684 152 aa11.44□□□□□ -0.58
GPNMB-206ENST00000465673 TBX3O15119 743 aa11.44□□□□□ -0.58
GPNMB-206ENST00000465673 C8AP07357 584 aa11.44□□□□□ -0.58
GPNMB-206ENST00000465673 GCFC2P16383 781 aaKnown RBP11.44□□□□□ -0.58
GPNMB-206ENST00000465673 CSTF1Q05048 431 aaKnown RBP11.44□□□□□ -0.58
GPNMB-206ENST00000465673 NR5A1Q13285 461 aa11.44□□□□□ -0.58
GPNMB-206ENST00000465673 PUM1Q14671 1186 aaKnown RBP eCLIP11.44□□□□□ -0.58
GPNMB-206ENST00000465673 PSMD5Q16401 504 aa11.44□□□□□ -0.58
GPNMB-206ENST00000465673 PPM1LQ5SGD2 360 aa11.44□□□□□ -0.58
GPNMB-206ENST00000465673 SLC27A1Q6PCB7 646 aa11.44□□□□□ -0.58
GPNMB-206ENST00000465673 ZC3H14Q6PJT7 736 aaKnown RBP11.44□□□□□ -0.58
GPNMB-206ENST00000465673 TSSK4Q6SA08 328 aa11.44□□□□□ -0.58
GPNMB-206ENST00000465673 RSPO2Q6UXX9 243 aaPredicted RBP11.44□□□□□ -0.58
GPNMB-206ENST00000465673 HSD17B14Q9BPX1 270 aa11.44□□□□□ -0.58
GPNMB-206ENST00000465673 TTPALQ9BTX7 342 aa11.44□□□□□ -0.58
GPNMB-206ENST00000465673 SNTG2Q9NY99 539 aa11.44□□□□□ -0.58
GPNMB-206ENST00000465673 DLL3Q9NYJ7 618 aa11.44□□□□□ -0.58
GPNMB-206ENST00000465673 CYP46A1Q9Y6A2 500 aa11.44□□□□□ -0.58
GPNMB-206ENST00000465673 MYH15Q9Y2K3 1946 aa11.44□□□□□ -0.58
GPNMB-206ENST00000465673 FANCMQ8IYD8 2048 aa11.43□□□□□ -0.58
GPNMB-206ENST00000465673 SF3B1O75533 1304 aaKnown RBP eCLIP11.43□□□□□ -0.58
GPNMB-206ENST00000465673 LRRIQ4A6NIV6 560 aa11.43□□□□□ -0.58
GPNMB-206ENST00000465673 USO1O60763 962 aaKnown RBP11.43□□□□□ -0.58
GPNMB-206ENST00000465673 CTDNEP1O95476 244 aa11.43□□□□□ -0.58
GPNMB-206ENST00000465673 EDN1P05305 212 aa11.43□□□□□ -0.58
GPNMB-206ENST00000465673 RARRES1P49788 294 aa11.43□□□□□ -0.58
GPNMB-206ENST00000465673 POU5F1BQ06416 359 aa11.43□□□□□ -0.58
GPNMB-206ENST00000465673 TUSC3Q13454 348 aa11.43□□□□□ -0.58
GPNMB-206ENST00000465673 PCBP1Q15365 356 aaKnown RBP eCLIP11.43□□□□□ -0.58
GPNMB-206ENST00000465673 MLF2Q15773 248 aaPredicted RBP11.43□□□□□ -0.58
GPNMB-206ENST00000465673 LIN9Q5TKA1 542 aa11.43□□□□□ -0.58
GPNMB-206ENST00000465673 NOSTRINQ8IVI9 506 aa11.43□□□□□ -0.58
GPNMB-206ENST00000465673 HACE1Q8IYU2 909 aa11.43□□□□□ -0.58
GPNMB-206ENST00000465673 SLC7A14Q8TBB6 771 aa11.43□□□□□ -0.58
GPNMB-206ENST00000465673 PIK3R5Q8WYR1 880 aa11.43□□□□□ -0.58
GPNMB-206ENST00000465673 SHDQ96IW2 340 aa11.43□□□□□ -0.58
GPNMB-206ENST00000465673 DDX23Q9BUQ8 820 aaKnown RBP11.43□□□□□ -0.58
GPNMB-206ENST00000465673 PLA2G2FQ9BZM2 168 aa11.43□□□□□ -0.58
GPNMB-206ENST00000465673 POLD4Q9HCU8 107 aa11.43□□□□□ -0.58
GPNMB-206ENST00000465673 DNMT3BQ9UBC3 853 aaKnown RBP11.43□□□□□ -0.58
GPNMB-206ENST00000465673 NOTCH4Q99466 2003 aa11.42□□□□□ -0.58
GPNMB-206ENST00000465673 I3L4J1 428 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms