RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 NRDE2Q9H7Z3 1164 aa22.24■■□□□ 1.15
SKA3-205ENST00000465471 PARP2Q9UGN5 583 aa22.24■■□□□ 1.15
SKA3-205ENST00000465471 STXBP5LQ9Y2K9 1186 aa22.24■■□□□ 1.15
SKA3-205ENST00000465471 CITO14578 2027 aa22.24■■□□□ 1.15
SKA3-205ENST00000465471 TRIP11Q15643 1979 aa22.23■■□□□ 1.15
SKA3-205ENST00000465471 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.23■■□□□ 1.15
SKA3-205ENST00000465471 A0A0B4J269 797 aa22.23■■□□□ 1.15
SKA3-205ENST00000465471 ANKRD63C9JTQ0 380 aa22.23■■□□□ 1.15
SKA3-205ENST00000465471 PTGESO14684 152 aa22.23■■□□□ 1.15
SKA3-205ENST00000465471 EIF3DO15371 548 aaKnown RBP eCLIP22.23■■□□□ 1.15
SKA3-205ENST00000465471 DDHD2O94830 711 aa22.23■■□□□ 1.15
SKA3-205ENST00000465471 POMCP01189 267 aa22.23■■□□□ 1.15
SKA3-205ENST00000465471 DPYDQ12882 1025 aa22.23■■□□□ 1.15
SKA3-205ENST00000465471 GPM6BQ13491 265 aa22.23■■□□□ 1.15
SKA3-205ENST00000465471 XKR4Q5GH76 650 aa22.23■■□□□ 1.15
SKA3-205ENST00000465471 KCNT2Q6UVM3 1135 aa22.23■■□□□ 1.15
SKA3-205ENST00000465471 ZNF280BQ86YH2 543 aa22.23■■□□□ 1.15
SKA3-205ENST00000465471 KLHL23Q8NBE8 558 aa22.23■■□□□ 1.15
SKA3-205ENST00000465471 ZNF558Q96NG5 402 aa22.23■■□□□ 1.15
SKA3-205ENST00000465471 CXCL16Q9H2A7 254 aa22.23■■□□□ 1.15
SKA3-205ENST00000465471 IKZF4Q9H2S9 585 aa22.23■■□□□ 1.15
SKA3-205ENST00000465471 LMCD1Q9NZU5 365 aa22.23■■□□□ 1.15
SKA3-205ENST00000465471 KLK14Q9P0G3 267 aa22.23■■□□□ 1.15
SKA3-205ENST00000465471 PLAGL2Q9UPG8 496 aa22.23■■□□□ 1.15
SKA3-205ENST00000465471 GDAQ9Y2T3 454 aa22.23■■□□□ 1.15
SKA3-205ENST00000465471 PCDHB12Q9Y5F1 795 aa22.23■■□□□ 1.15
SKA3-205ENST00000465471 PDCD11Q14690 1871 aaKnown RBP22.22■■□□□ 1.15
SKA3-205ENST00000465471 TISP43B9A030 160 aa22.22■■□□□ 1.15
SKA3-205ENST00000465471 MEFVO15553 781 aaPredicted RBP22.22■■□□□ 1.15
SKA3-205ENST00000465471 ITGB1P05556 798 aa22.22■■□□□ 1.15
SKA3-205ENST00000465471 FOSL2P15408 326 aa22.22■■□□□ 1.15
SKA3-205ENST00000465471 GRIK3Q13003 919 aa22.22■■□□□ 1.15
SKA3-205ENST00000465471 SPOUT1Q5T280 376 aaKnown RBP22.22■■□□□ 1.15
SKA3-205ENST00000465471 KANK3Q6NY19 840 aa22.22■■□□□ 1.15
SKA3-205ENST00000465471 ALKAL1Q6UXT8 129 aa22.22■■□□□ 1.15
SKA3-205ENST00000465471 STXBP4Q6ZWJ1 553 aa22.22■■□□□ 1.15
SKA3-205ENST00000465471 SLC39A11Q8N1S5 342 aa22.22■■□□□ 1.15
SKA3-205ENST00000465471 TIGD1Q96MW7 591 aa22.22■■□□□ 1.15
SKA3-205ENST00000465471 CCDC94Q9BW85 323 aaPredicted RBP22.22■■□□□ 1.15
SKA3-205ENST00000465471 DNAJB4Q9UDY4 337 aa22.22■■□□□ 1.15
SKA3-205ENST00000465471 EXOC7Q9UPT5 735 aa22.22■■□□□ 1.15
SKA3-205ENST00000465471 MTCH2Q9Y6C9 303 aa22.22■■□□□ 1.15
SKA3-205ENST00000465471 UBE4BO95155 1302 aa22.22■■□□□ 1.15
SKA3-205ENST00000465471 CARNS1A5YM72 827 aa22.21■■□□□ 1.15
SKA3-205ENST00000465471 GRM6O15303 877 aa22.21■■□□□ 1.15
SKA3-205ENST00000465471 ZC3H11AO75152 810 aaKnown RBP eCLIP22.21■■□□□ 1.15
SKA3-205ENST00000465471 NR1I2O75469 434 aa22.21■■□□□ 1.15
SKA3-205ENST00000465471 PRPF6O94906 941 aaKnown RBP22.21■■□□□ 1.15
SKA3-205ENST00000465471 ADSSP30520 456 aa22.21■■□□□ 1.15
SKA3-205ENST00000465471 HOXD13P35453 343 aa22.21■■□□□ 1.15
SKA3-205ENST00000465471 PPM1AP35813 382 aa22.21■■□□□ 1.15
SKA3-205ENST00000465471 PBX3P40426 434 aa22.21■■□□□ 1.15
SKA3-205ENST00000465471 BCAR1P56945 870 aa22.21■■□□□ 1.15
SKA3-205ENST00000465471 RNASELQ05823 741 aaKnown RBP22.21■■□□□ 1.15
SKA3-205ENST00000465471 NAB2Q15742 525 aa22.21■■□□□ 1.15
SKA3-205ENST00000465471 BMT2Q1RMZ1 405 aa22.21■■□□□ 1.15
SKA3-205ENST00000465471 KMT5BQ4FZB7 885 aa22.21■■□□□ 1.15
SKA3-205ENST00000465471 COLGALT2Q8IYK4 626 aa22.21■■□□□ 1.15
SKA3-205ENST00000465471 THNSL1Q8IYQ7 743 aa22.21■■□□□ 1.15
SKA3-205ENST00000465471 ZNF507Q8TCN5 953 aa22.21■■□□□ 1.15
SKA3-205ENST00000465471 SNX27Q96L92 541 aa22.21■■□□□ 1.15
SKA3-205ENST00000465471 RPS6KC1Q96S38 1066 aa22.21■■□□□ 1.15
SKA3-205ENST00000465471 TMEM175Q9BSA9 504 aa22.21■■□□□ 1.15
SKA3-205ENST00000465471 LMAN2LQ9H0V9 348 aa22.21■■□□□ 1.15
SKA3-205ENST00000465471 PRRC2BQ5JSZ5 2229 aaKnown RBP22.21■■□□□ 1.15
SKA3-205ENST00000465471 EYSQ5T1H1 3165 aa22.2■■□□□ 1.14
SKA3-205ENST00000465471 OGTO15294 1046 aa22.2■■□□□ 1.14
SKA3-205ENST00000465471 FGF18O76093 207 aa22.2■■□□□ 1.14
SKA3-205ENST00000465471 RPN1P04843 607 aaKnown RBP22.2■■□□□ 1.14
SKA3-205ENST00000465471 GALTP07902 379 aa22.2■■□□□ 1.14
SKA3-205ENST00000465471 HARSP12081 509 aaKnown RBP22.2■■□□□ 1.14
SKA3-205ENST00000465471 SLC11A1P49279 550 aa22.2■■□□□ 1.14
SKA3-205ENST00000465471 PLCB3Q01970 1234 aa22.2■■□□□ 1.14
SKA3-205ENST00000465471 CAMK1Q14012 370 aa22.2■■□□□ 1.14
SKA3-205ENST00000465471 POSTNQ15063 836 aa22.2■■□□□ 1.14
SKA3-205ENST00000465471 KYAT1Q16773 422 aa22.2■■□□□ 1.14
SKA3-205ENST00000465471 SLFN12LQ6IEE8 588 aa22.2■■□□□ 1.14
SKA3-205ENST00000465471 SPPL3Q8TCT6 385 aa22.2■■□□□ 1.14
SKA3-205ENST00000465471 TMEM206Q9H813 350 aa22.2■■□□□ 1.14
SKA3-205ENST00000465471 TOPORSQ9NS56 1045 aaPredicted RBP22.2■■□□□ 1.14
SKA3-205ENST00000465471 COL6A3P12111 3177 aa22.2■■□□□ 1.14
SKA3-205ENST00000465471 YARSP54577 528 aaKnown RBP22.19■■□□□ 1.14
SKA3-205ENST00000465471 OSTNP61366 133 aa22.19■■□□□ 1.14
SKA3-205ENST00000465471 UBE2HP62256 183 aa22.19■■□□□ 1.14
SKA3-205ENST00000465471 UBE3AQ05086 875 aa22.19■■□□□ 1.14
SKA3-205ENST00000465471 STK4Q13043 487 aa22.19■■□□□ 1.14
SKA3-205ENST00000465471 PSMD2Q13200 908 aa22.19■■□□□ 1.14
SKA3-205ENST00000465471 TMEM173Q86WV6 379 aaPredicted RBP22.19■■□□□ 1.14
SKA3-205ENST00000465471 ELOA2Q8IYF1 753 aaPredicted RBP22.19■■□□□ 1.14
SKA3-205ENST00000465471 KIAA0895Q8NCT3 520 aa22.19■■□□□ 1.14
SKA3-205ENST00000465471 SCFD1Q8WVM8 642 aa22.19■■□□□ 1.14
SKA3-205ENST00000465471 MRPL38Q96DV4 380 aaKnown RBP22.19■■□□□ 1.14
SKA3-205ENST00000465471 CCDC34Q96HJ3 373 aa22.19■■□□□ 1.14
SKA3-205ENST00000465471 ACAP3Q96P50 834 aa22.19■■□□□ 1.14
SKA3-205ENST00000465471 PPP1R10Q96QC0 940 aaKnown RBP22.19■■□□□ 1.14
SKA3-205ENST00000465471 MSTO1Q9BUK6 570 aa22.19■■□□□ 1.14
SKA3-205ENST00000465471 GBP3Q9H0R5 595 aa22.19■■□□□ 1.14
SKA3-205ENST00000465471 ALG13Q9NP73 1137 aaKnown RBP22.19■■□□□ 1.14
SKA3-205ENST00000465471 EXOC1Q9NV70 894 aa22.19■■□□□ 1.14
SKA3-205ENST00000465471 SPG21Q9NZD8 308 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms