RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 SRGAP1Q7Z6B7 1085 aa19.17■□□□□ 0.66
CPSF4-209ENST00000465132 MYCT1Q8N699 235 aa19.17■□□□□ 0.66
CPSF4-209ENST00000465132 DEPTORQ8TB45 409 aa19.17■□□□□ 0.66
CPSF4-209ENST00000465132 PBXIP1Q96AQ6 731 aa19.17■□□□□ 0.66
CPSF4-209ENST00000465132 REEP2Q9BRK0 252 aa19.17■□□□□ 0.66
CPSF4-209ENST00000465132 NFKBIZQ9BYH8 718 aa19.17■□□□□ 0.66
CPSF4-209ENST00000465132 ZHX3Q9H4I2 956 aa19.17■□□□□ 0.66
CPSF4-209ENST00000465132 MYMKA6NI61 221 aa19.16■□□□□ 0.66
CPSF4-209ENST00000465132 CSDE1O75534 798 aaKnown RBP19.16■□□□□ 0.66
CPSF4-209ENST00000465132 MAPTP10636 758 aaKnown RBP19.16■□□□□ 0.66
CPSF4-209ENST00000465132 LIG1P18858 919 aa19.16■□□□□ 0.66
CPSF4-209ENST00000465132 PSMD2Q13200 908 aa19.16■□□□□ 0.66
CPSF4-209ENST00000465132 ALCAMQ13740 583 aa19.16■□□□□ 0.66
CPSF4-209ENST00000465132 DYMQ7RTS9 669 aa19.16■□□□□ 0.66
CPSF4-209ENST00000465132 TMC7Q7Z402 723 aa19.16■□□□□ 0.66
CPSF4-209ENST00000465132 SLC39A11Q8N1S5 342 aa19.16■□□□□ 0.66
CPSF4-209ENST00000465132 HELQQ8TDG4 1101 aa19.16■□□□□ 0.66
CPSF4-209ENST00000465132 SPIRE2Q8WWL2 714 aa19.16■□□□□ 0.66
CPSF4-209ENST00000465132 NTPCRQ9BSD7 190 aaKnown RBP19.16■□□□□ 0.66
CPSF4-209ENST00000465132 PANK4Q9NVE7 773 aa19.16■□□□□ 0.66
CPSF4-209ENST00000465132 CCDC169A6NNP5 214 aa19.15■□□□□ 0.66
CPSF4-209ENST00000465132 KIF20AO95235 890 aa19.15■□□□□ 0.66
CPSF4-209ENST00000465132 HOXB8P17481 243 aaPredicted RBP19.15■□□□□ 0.66
CPSF4-209ENST00000465132 SFPQP23246 707 aaKnown RBP eCLIP19.15■□□□□ 0.66
CPSF4-209ENST00000465132 ZNF131P52739 623 aa19.15■□□□□ 0.66
CPSF4-209ENST00000465132 RAD51AP2Q09MP3 1159 aa19.15■□□□□ 0.66
CPSF4-209ENST00000465132 UNC13DQ70J99 1090 aa19.15■□□□□ 0.66
CPSF4-209ENST00000465132 NLRP4Q96MN2 994 aa19.15■□□□□ 0.66
CPSF4-209ENST00000465132 GSDMAQ96QA5 445 aa19.15■□□□□ 0.66
CPSF4-209ENST00000465132 APOL5Q9BWW9 433 aa19.15■□□□□ 0.66
CPSF4-209ENST00000465132 KMT5AQ9NQR1 393 aa19.15■□□□□ 0.66
CPSF4-209ENST00000465132 CHST12Q9NRB3 414 aa19.15■□□□□ 0.66
CPSF4-209ENST00000465132 EXOC1Q9NV70 894 aa19.15■□□□□ 0.66
CPSF4-209ENST00000465132 C2orf71A6NGG8 1288 aa19.14■□□□□ 0.65
CPSF4-209ENST00000465132 LRRIQ4A6NIV6 560 aa19.14■□□□□ 0.65
CPSF4-209ENST00000465132 TRAK2O60296 914 aa19.14■□□□□ 0.65
CPSF4-209ENST00000465132 SRGAP2CP0DJJ0 459 aa19.14■□□□□ 0.65
CPSF4-209ENST00000465132 SIGLEC14Q08ET2 396 aa19.14■□□□□ 0.65
CPSF4-209ENST00000465132 SMC1AQ14683 1233 aaKnown RBP19.14■□□□□ 0.65
CPSF4-209ENST00000465132 MRPL43Q8N983 215 aaKnown RBP19.14■□□□□ 0.65
CPSF4-209ENST00000465132 RNF149Q8NC42 400 aa19.14■□□□□ 0.65
CPSF4-209ENST00000465132 SMARCE1Q969G3 411 aa19.14■□□□□ 0.65
CPSF4-209ENST00000465132 MRPL9Q9BYD2 267 aaKnown RBP19.14■□□□□ 0.65
CPSF4-209ENST00000465132 NUP62CLQ9H1M0 184 aa19.14■□□□□ 0.65
CPSF4-209ENST00000465132 OLFML3Q9NRN5 406 aa19.14■□□□□ 0.65
CPSF4-209ENST00000465132 A0A087WZ62 844 aa19.13■□□□□ 0.65
CPSF4-209ENST00000465132 GLRA2P23416 452 aa19.13■□□□□ 0.65
CPSF4-209ENST00000465132 PEX3P56589 373 aa19.13■□□□□ 0.65
CPSF4-209ENST00000465132 BCAR1P56945 870 aa19.13■□□□□ 0.65
CPSF4-209ENST00000465132 STRN3Q13033 797 aa19.13■□□□□ 0.65
CPSF4-209ENST00000465132 PTPN21Q16825 1174 aa19.13■□□□□ 0.65
CPSF4-209ENST00000465132 IER5LQ5T953 404 aa19.13■□□□□ 0.65
CPSF4-209ENST00000465132 APBB1IPQ7Z5R6 666 aaPredicted RBP19.13■□□□□ 0.65
CPSF4-209ENST00000465132 IFNLR1Q8IU57 520 aaPredicted RBP19.13■□□□□ 0.65
CPSF4-209ENST00000465132 SUGP1Q8IWZ8 645 aaKnown RBP19.13■□□□□ 0.65
CPSF4-209ENST00000465132 FBXL6Q8N531 539 aa19.13■□□□□ 0.65
CPSF4-209ENST00000465132 PRSS33Q8NF86 280 aa19.13■□□□□ 0.65
CPSF4-209ENST00000465132 LRRC15Q8TF66 581 aa19.13■□□□□ 0.65
CPSF4-209ENST00000465132 STAMQ92783 540 aa19.13■□□□□ 0.65
CPSF4-209ENST00000465132 CASP10Q92851 521 aa19.13■□□□□ 0.65
CPSF4-209ENST00000465132 HVCN1Q96D96 273 aa19.13■□□□□ 0.65
CPSF4-209ENST00000465132 DNAJC19Q96DA6 116 aa19.13■□□□□ 0.65
CPSF4-209ENST00000465132 FDXACB1Q9BRP7 624 aaPredicted RBP19.13■□□□□ 0.65
CPSF4-209ENST00000465132 TRAIPQ9BWF2 469 aa19.13■□□□□ 0.65
CPSF4-209ENST00000465132 GPRC5CQ9NQ84 441 aa19.13■□□□□ 0.65
CPSF4-209ENST00000465132 PCDHB13Q9Y5F0 798 aa19.13■□□□□ 0.65
CPSF4-209ENST00000465132 FRMD3A2A2Y4 597 aa19.12■□□□□ 0.65
CPSF4-209ENST00000465132 K7ERI5 159 aa19.12■□□□□ 0.65
CPSF4-209ENST00000465132 ERLIN2O94905 339 aa19.12■□□□□ 0.65
CPSF4-209ENST00000465132 RPN1P04843 607 aaKnown RBP19.12■□□□□ 0.65
CPSF4-209ENST00000465132 ALDH7A1P49419 539 aaKnown RBP19.12■□□□□ 0.65
CPSF4-209ENST00000465132 PTENP60484 403 aa19.12■□□□□ 0.65
CPSF4-209ENST00000465132 CAPSQ13938 189 aa19.12■□□□□ 0.65
CPSF4-209ENST00000465132 KCNB1Q14721 858 aa19.12■□□□□ 0.65
CPSF4-209ENST00000465132 ASAP3Q8TDY4 903 aa19.12■□□□□ 0.65
CPSF4-209ENST00000465132 RSPH1Q8WYR4 309 aa19.12■□□□□ 0.65
CPSF4-209ENST00000465132 ASIC4Q96FT7 647 aa19.12■□□□□ 0.65
CPSF4-209ENST00000465132 PRIMPOLQ96LW4 560 aa19.12■□□□□ 0.65
CPSF4-209ENST00000465132 CLSTN2Q9H4D0 955 aa19.12■□□□□ 0.65
CPSF4-209ENST00000465132 ST6GALNAC4Q9H4F1 302 aa19.12■□□□□ 0.65
CPSF4-209ENST00000465132 TMEM134Q9H6X4 195 aa19.12■□□□□ 0.65
CPSF4-209ENST00000465132 MRPL44Q9H9J2 332 aaKnown RBP19.12■□□□□ 0.65
CPSF4-209ENST00000465132 PRMT7Q9NVM4 692 aaPredicted RBP19.12■□□□□ 0.65
CPSF4-209ENST00000465132 EXOC7Q9UPT5 735 aa19.12■□□□□ 0.65
CPSF4-209ENST00000465132 HCFC2Q9Y5Z7 792 aa19.12■□□□□ 0.65
CPSF4-209ENST00000465132 TRIOO75962 3097 aa19.11■□□□□ 0.65
CPSF4-209ENST00000465132 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.11■□□□□ 0.65
CPSF4-209ENST00000465132 NPHP3-ACAD11A0A0J9YXS1 232 aa19.11■□□□□ 0.65
CPSF4-209ENST00000465132 NT5C1B-RDH14C9J2C7 533 aa19.11■□□□□ 0.65
CPSF4-209ENST00000465132 INO80B-WBP1J3KQ70 363 aa19.11■□□□□ 0.65
CPSF4-209ENST00000465132 CLASP2O75122 1294 aaKnown RBP19.11■□□□□ 0.65
CPSF4-209ENST00000465132 LETM1O95202 739 aaPredicted RBP19.11■□□□□ 0.65
CPSF4-209ENST00000465132 AXLP30530 894 aa19.11■□□□□ 0.65
CPSF4-209ENST00000465132 PPP1R2P41236 205 aa19.11■□□□□ 0.65
CPSF4-209ENST00000465132 NPTX2P47972 431 aa19.11■□□□□ 0.65
CPSF4-209ENST00000465132 DPYDQ12882 1025 aa19.11■□□□□ 0.65
CPSF4-209ENST00000465132 MAPK7Q13164 816 aa19.11■□□□□ 0.65
CPSF4-209ENST00000465132 CUL4BQ13620 913 aa19.11■□□□□ 0.65
CPSF4-209ENST00000465132 MAPK6Q16659 721 aa19.11■□□□□ 0.65
CPSF4-209ENST00000465132 CDCA2Q69YH5 1023 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms