RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 K7ERI5 159 aa20.77■□□□□ 0.92
SF3A1-205ENST00000463818 PTGESO14684 152 aa20.77■□□□□ 0.92
SF3A1-205ENST00000463818 RECQL4O94761 1208 aa20.77■□□□□ 0.92
SF3A1-205ENST00000463818 THP07101 528 aa20.77■□□□□ 0.92
SF3A1-205ENST00000463818 MYBP10242 640 aa20.77■□□□□ 0.92
SF3A1-205ENST00000463818 TUSC3Q13454 348 aa20.77■□□□□ 0.92
SF3A1-205ENST00000463818 HSP90AA2PQ14568 343 aaPredicted RBP20.77■□□□□ 0.92
SF3A1-205ENST00000463818 ATF7IP2Q5U623 682 aa20.77■□□□□ 0.92
SF3A1-205ENST00000463818 PALB2Q86YC2 1186 aa20.77■□□□□ 0.92
SF3A1-205ENST00000463818 ZDHHC14Q8IZN3 488 aa20.77■□□□□ 0.92
SF3A1-205ENST00000463818 PLCD3Q8N3E9 789 aa20.77■□□□□ 0.92
SF3A1-205ENST00000463818 TDRD5Q8NAT2 981 aaKnown RBP20.77■□□□□ 0.92
SF3A1-205ENST00000463818 ASIC4Q96FT7 647 aa20.77■□□□□ 0.92
SF3A1-205ENST00000463818 MMTAG2Q9BU76 263 aaKnown RBP20.77■□□□□ 0.92
SF3A1-205ENST00000463818 MAN1C1Q9NR34 630 aa20.77■□□□□ 0.92
SF3A1-205ENST00000463818 GDAQ9Y2T3 454 aa20.77■□□□□ 0.92
SF3A1-205ENST00000463818 CASTOR2A6NHX0 329 aa20.76■□□□□ 0.91
SF3A1-205ENST00000463818 CCDC169A6NNP5 214 aa20.76■□□□□ 0.91
SF3A1-205ENST00000463818 GLUD1P00367 558 aa20.76■□□□□ 0.91
SF3A1-205ENST00000463818 SPATA31D3P0C874 917 aa20.76■□□□□ 0.91
SF3A1-205ENST00000463818 NPTX2P47972 431 aa20.76■□□□□ 0.91
SF3A1-205ENST00000463818 PEX3P56589 373 aa20.76■□□□□ 0.91
SF3A1-205ENST00000463818 ZRSR1Q15695 479 aaKnown RBP20.76■□□□□ 0.91
SF3A1-205ENST00000463818 DCAF4L1Q3SXM0 396 aa20.76■□□□□ 0.91
SF3A1-205ENST00000463818 RINT1Q6NUQ1 792 aa20.76■□□□□ 0.91
SF3A1-205ENST00000463818 C15orf39Q6ZRI6 1047 aa20.76■□□□□ 0.91
SF3A1-205ENST00000463818 SPATA31D4Q6ZUB0 917 aa20.76■□□□□ 0.91
SF3A1-205ENST00000463818 KCNK18Q7Z418 384 aa20.76■□□□□ 0.91
SF3A1-205ENST00000463818 GPR65Q8IYL9 337 aa20.76■□□□□ 0.91
SF3A1-205ENST00000463818 FBXL6Q8N531 539 aa20.76■□□□□ 0.91
SF3A1-205ENST00000463818 RIN2Q8WYP3 895 aaPredicted RBP20.76■□□□□ 0.91
SF3A1-205ENST00000463818 RUSC1Q9BVN2 902 aa20.76■□□□□ 0.91
SF3A1-205ENST00000463818 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.76■□□□□ 0.91
SF3A1-205ENST00000463818 DPP7Q9UHL4 492 aa20.76■□□□□ 0.91
SF3A1-205ENST00000463818 SORCS3Q9UPU3 1222 aa20.76■□□□□ 0.91
SF3A1-205ENST00000463818 CCDC195A0A1B0GUA6 201 aa20.75■□□□□ 0.91
SF3A1-205ENST00000463818 HIP1RO75146 1068 aa20.75■□□□□ 0.91
SF3A1-205ENST00000463818 ASGR2P07307 311 aa20.75■□□□□ 0.91
SF3A1-205ENST00000463818 MCM2P49736 904 aa20.75■□□□□ 0.91
SF3A1-205ENST00000463818 ATP2C1P98194 919 aaPredicted RBP20.75■□□□□ 0.91
SF3A1-205ENST00000463818 C1orf186Q6ZWK4 172 aa20.75■□□□□ 0.91
SF3A1-205ENST00000463818 SUGP1Q8IWZ8 645 aaKnown RBP20.75■□□□□ 0.91
SF3A1-205ENST00000463818 DAW1Q8N136 415 aa20.75■□□□□ 0.91
SF3A1-205ENST00000463818 CMASQ8NFW8 434 aaPredicted RBP20.75■□□□□ 0.91
SF3A1-205ENST00000463818 FNIP2Q9P278 1114 aa20.75■□□□□ 0.91
SF3A1-205ENST00000463818 DAXXQ9UER7 740 aaPredicted RBP20.75■□□□□ 0.91
SF3A1-205ENST00000463818 SMC3Q9UQE7 1217 aa20.75■□□□□ 0.91
SF3A1-205ENST00000463818 TNFSF13BQ9Y275 285 aa20.75■□□□□ 0.91
SF3A1-205ENST00000463818 MUC6Q6W4X9 2439 aa20.75■□□□□ 0.91
SF3A1-205ENST00000463818 BRD1O95696 1058 aa20.74■□□□□ 0.91
SF3A1-205ENST00000463818 RPL17P18621 184 aaKnown RBP20.74■□□□□ 0.91
SF3A1-205ENST00000463818 HOXD11P31277 338 aaPredicted RBP20.74■□□□□ 0.91
SF3A1-205ENST00000463818 MTMR3Q13615 1198 aa20.74■□□□□ 0.91
SF3A1-205ENST00000463818 NAB2Q15742 525 aa20.74■□□□□ 0.91
SF3A1-205ENST00000463818 ELMSAN1Q6PJG2 1045 aa20.74■□□□□ 0.91
SF3A1-205ENST00000463818 CCDC149Q6ZUS6 474 aa20.74■□□□□ 0.91
SF3A1-205ENST00000463818 OTOP3Q7RTS5 596 aa20.74■□□□□ 0.91
SF3A1-205ENST00000463818 GLYCTKQ8IVS8 523 aa20.74■□□□□ 0.91
SF3A1-205ENST00000463818 UBALD2Q8IYN6 164 aa20.74■□□□□ 0.91
SF3A1-205ENST00000463818 HASPINQ8TF76 798 aa20.74■□□□□ 0.91
SF3A1-205ENST00000463818 HDAC7Q8WUI4 952 aa20.74■□□□□ 0.91
SF3A1-205ENST00000463818 ACSF2Q96CM8 615 aaPredicted RBP20.74■□□□□ 0.91
SF3A1-205ENST00000463818 ACO2Q99798 780 aaKnown RBP20.74■□□□□ 0.91
SF3A1-205ENST00000463818 TMEM134Q9H6X4 195 aa20.74■□□□□ 0.91
SF3A1-205ENST00000463818 SF3B1O75533 1304 aaKnown RBP eCLIP20.74■□□□□ 0.91
SF3A1-205ENST00000463818 TRIOO75962 3097 aa20.73■□□□□ 0.91
SF3A1-205ENST00000463818 SFI1A8K8P3 1242 aa20.73■□□□□ 0.91
SF3A1-205ENST00000463818 TGM5O43548 720 aa20.73■□□□□ 0.91
SF3A1-205ENST00000463818 RFPL2O75678 378 aa20.73■□□□□ 0.91
SF3A1-205ENST00000463818 KIF4AO95239 1232 aa20.73■□□□□ 0.91
SF3A1-205ENST00000463818 C1RP00736 705 aa20.73■□□□□ 0.91
SF3A1-205ENST00000463818 DMP1Q13316 513 aaPredicted RBP20.73■□□□□ 0.91
SF3A1-205ENST00000463818 RTP2Q5QGT7 225 aa20.73■□□□□ 0.91
SF3A1-205ENST00000463818 IER5LQ5T953 404 aa20.73■□□□□ 0.91
SF3A1-205ENST00000463818 FAM171A1Q5VUB5 890 aa20.73■□□□□ 0.91
SF3A1-205ENST00000463818 LILRA6Q6PI73 481 aa20.73■□□□□ 0.91
SF3A1-205ENST00000463818 PRSS55Q6UWB4 352 aaPredicted RBP20.73■□□□□ 0.91
SF3A1-205ENST00000463818 APBB1IPQ7Z5R6 666 aaPredicted RBP20.73■□□□□ 0.91
SF3A1-205ENST00000463818 CEP57Q86XR8 500 aa20.73■□□□□ 0.91
SF3A1-205ENST00000463818 DRC1Q96MC2 740 aa20.73■□□□□ 0.91
SF3A1-205ENST00000463818 PNMA5Q96PV4 448 aa20.73■□□□□ 0.91
SF3A1-205ENST00000463818 PLIN2Q99541 437 aa20.73■□□□□ 0.91
SF3A1-205ENST00000463818 PLEKHA4Q9H4M7 779 aa20.73■□□□□ 0.91
SF3A1-205ENST00000463818 KMT5AQ9NQR1 393 aa20.73■□□□□ 0.91
SF3A1-205ENST00000463818 RBM19Q9Y4C8 960 aaKnown RBP20.73■□□□□ 0.91
SF3A1-205ENST00000463818 VWA3AA6NCI4 1184 aa20.72■□□□□ 0.91
SF3A1-205ENST00000463818 CREMQ03060 361 aa20.72■□□□□ 0.91
SF3A1-205ENST00000463818 MAPK7Q13164 816 aa20.72■□□□□ 0.91
SF3A1-205ENST00000463818 HYIQ5T013 277 aa20.72■□□□□ 0.91
SF3A1-205ENST00000463818 LARP1BQ659C4 914 aaKnown RBP20.72■□□□□ 0.91
SF3A1-205ENST00000463818 CYP26C1Q6V0L0 522 aa20.72■□□□□ 0.91
SF3A1-205ENST00000463818 TAS1R3Q7RTX0 852 aa20.72■□□□□ 0.91
SF3A1-205ENST00000463818 TBC1D32Q96NH3 1257 aa20.72■□□□□ 0.91
SF3A1-205ENST00000463818 TTPALQ9BTX7 342 aa20.72■□□□□ 0.91
SF3A1-205ENST00000463818 SMOC2Q9H3U7 446 aa20.72■□□□□ 0.91
SF3A1-205ENST00000463818 C17orf75Q9HAS0 396 aa20.72■□□□□ 0.91
SF3A1-205ENST00000463818 PTPRHQ9HD43 1115 aa20.72■□□□□ 0.91
SF3A1-205ENST00000463818 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.72■□□□□ 0.91
SF3A1-205ENST00000463818 PDGFBP01127 241 aaPredicted RBP20.71■□□□□ 0.91
SF3A1-205ENST00000463818 NHLH1Q02575 133 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms