RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 TSPAN1O60635 241 aa20.61■□□□□ 0.89
CCDC78-206ENST00000463539 CDK17Q00537 523 aa20.61■□□□□ 0.89
CCDC78-206ENST00000463539 EPC2Q52LR7 807 aa20.61■□□□□ 0.89
CCDC78-206ENST00000463539 FAM47CQ5HY64 1035 aa20.61■□□□□ 0.89
CCDC78-206ENST00000463539 CDR2LQ86X02 465 aaPredicted RBP20.61■□□□□ 0.89
CCDC78-206ENST00000463539 BRSK2Q8IWQ3 736 aa20.61■□□□□ 0.89
CCDC78-206ENST00000463539 EHBP1Q8NDI1 1231 aa20.61■□□□□ 0.89
CCDC78-206ENST00000463539 SPAG5Q96R06 1193 aa20.61■□□□□ 0.89
CCDC78-206ENST00000463539 OSMRQ99650 979 aa20.61■□□□□ 0.89
CCDC78-206ENST00000463539 CHP1Q99653 195 aa20.61■□□□□ 0.89
CCDC78-206ENST00000463539 CDT1Q9H211 546 aa20.61■□□□□ 0.89
CCDC78-206ENST00000463539 PDE11AQ9HCR9 933 aa20.61■□□□□ 0.89
CCDC78-206ENST00000463539 HMX1Q9NP08 348 aaPredicted RBP20.61■□□□□ 0.89
CCDC78-206ENST00000463539 TRMT1Q9NXH9 659 aaKnown RBP20.61■□□□□ 0.89
CCDC78-206ENST00000463539 PTCH2Q9Y6C5 1203 aa20.61■□□□□ 0.89
CCDC78-206ENST00000463539 EVPLQ92817 2033 aa20.6■□□□□ 0.89
CCDC78-206ENST00000463539 USP27XA6NNY8 438 aa20.6■□□□□ 0.89
CCDC78-206ENST00000463539 CCP110O43303 1012 aa20.6■□□□□ 0.89
CCDC78-206ENST00000463539 ARF4P18085 180 aaPredicted RBP20.6■□□□□ 0.89
CCDC78-206ENST00000463539 TNNI1P19237 187 aa20.6■□□□□ 0.89
CCDC78-206ENST00000463539 CLCN1P35523 988 aa20.6■□□□□ 0.89
CCDC78-206ENST00000463539 CLDN10P78369 228 aa20.6■□□□□ 0.89
CCDC78-206ENST00000463539 RAPGEF1Q13905 1077 aa20.6■□□□□ 0.89
CCDC78-206ENST00000463539 SFMBT2Q5VUG0 894 aa20.6■□□□□ 0.89
CCDC78-206ENST00000463539 ZNF710Q8N1W2 664 aa20.6■□□□□ 0.89
CCDC78-206ENST00000463539 NME8Q8N427 588 aa20.6■□□□□ 0.89
CCDC78-206ENST00000463539 SYN2Q92777 582 aaPredicted RBP20.6■□□□□ 0.89
CCDC78-206ENST00000463539 PDZD7Q9H5P4 517 aa20.6■□□□□ 0.89
CCDC78-206ENST00000463539 APEX2Q9UBZ4 518 aa20.6■□□□□ 0.89
CCDC78-206ENST00000463539 ZSCAN12O43309 604 aa20.6■□□□□ 0.89
CCDC78-206ENST00000463539 TNFSF9P41273 254 aa20.6■□□□□ 0.89
CCDC78-206ENST00000463539 LMO3Q8TAP4 145 aa20.6■□□□□ 0.89
CCDC78-206ENST00000463539 CPB2Q96IY4 423 aa20.6■□□□□ 0.89
CCDC78-206ENST00000463539 DESI2Q9BSY9 194 aa20.6■□□□□ 0.89
CCDC78-206ENST00000463539 CPSF3Q9UKF6 684 aaKnown RBP20.6■□□□□ 0.89
CCDC78-206ENST00000463539 MYO6Q9UM54 1294 aa20.6■□□□□ 0.89
CCDC78-206ENST00000463539 DAAM1Q9Y4D1 1078 aa20.6■□□□□ 0.89
CCDC78-206ENST00000463539 MCF2P10911 925 aa20.59■□□□□ 0.89
CCDC78-206ENST00000463539 DARSP14868 501 aaKnown RBP20.59■□□□□ 0.89
CCDC78-206ENST00000463539 RFX1P22670 979 aa20.59■□□□□ 0.89
CCDC78-206ENST00000463539 WNT7BP56706 349 aa20.59■□□□□ 0.89
CCDC78-206ENST00000463539 PCBP1Q15365 356 aaKnown RBP eCLIP20.59■□□□□ 0.89
CCDC78-206ENST00000463539 IQCEQ6IPM2 695 aa20.59■□□□□ 0.89
CCDC78-206ENST00000463539 GJB7Q6PEY0 223 aa20.59■□□□□ 0.89
CCDC78-206ENST00000463539 SV2AQ7L0J3 742 aa20.59■□□□□ 0.89
CCDC78-206ENST00000463539 THNSL1Q8IYQ7 743 aa20.59■□□□□ 0.89
CCDC78-206ENST00000463539 FBXL13Q8NEE6 735 aa20.59■□□□□ 0.89
CCDC78-206ENST00000463539 CGRRF1Q99675 332 aa20.59■□□□□ 0.89
CCDC78-206ENST00000463539 PPP2R2CQ9Y2T4 447 aa20.59■□□□□ 0.89
CCDC78-206ENST00000463539 NCBP1Q09161 790 aaKnown RBP20.58■□□□□ 0.89
CCDC78-206ENST00000463539 LMBRD2Q68DH5 695 aaPredicted RBP20.58■□□□□ 0.89
CCDC78-206ENST00000463539 GDF6Q6KF10 455 aaPredicted RBP20.58■□□□□ 0.89
CCDC78-206ENST00000463539 CATSPER4Q7RTX7 472 aa20.58■□□□□ 0.89
CCDC78-206ENST00000463539 PPP1R13BQ96KQ4 1090 aa20.58■□□□□ 0.89
CCDC78-206ENST00000463539 NHEJ1Q9H9Q4 299 aaPredicted RBP20.58■□□□□ 0.89
CCDC78-206ENST00000463539 CDHR5Q9HBB8 845 aa20.58■□□□□ 0.89
CCDC78-206ENST00000463539 COQ4Q9Y3A0 265 aa20.58■□□□□ 0.89
CCDC78-206ENST00000463539 CABYRO75952 493 aa20.57■□□□□ 0.88
CCDC78-206ENST00000463539 CCDC175P0C221 793 aa20.57■□□□□ 0.88
CCDC78-206ENST00000463539 HSPA6P17066 643 aa20.57■□□□□ 0.88
CCDC78-206ENST00000463539 FGFR4P22455 802 aa20.57■□□□□ 0.88
CCDC78-206ENST00000463539 EIF4BP23588 611 aaKnown RBP20.57■□□□□ 0.88
CCDC78-206ENST00000463539 SESTD1Q86VW0 696 aa20.57■□□□□ 0.88
CCDC78-206ENST00000463539 TAS1R2Q8TE23 839 aa20.57■□□□□ 0.88
CCDC78-206ENST00000463539 ADPGKQ9BRR6 497 aa20.57■□□□□ 0.88
CCDC78-206ENST00000463539 DNAJC12Q9UKB3 198 aa20.57■□□□□ 0.88
CCDC78-206ENST00000463539 AJAP1Q9UKB5 411 aaPredicted RBP20.57■□□□□ 0.88
CCDC78-206ENST00000463539 KAT6AQ92794 2004 aa20.57■□□□□ 0.88
CCDC78-206ENST00000463539 PTPRJQ12913 1337 aa20.57■□□□□ 0.88
CCDC78-206ENST00000463539 SCN10AQ9Y5Y9 1956 aa20.57■□□□□ 0.88
CCDC78-206ENST00000463539 A0A1B0GUA9 196 aa20.57■□□□□ 0.88
CCDC78-206ENST00000463539 ACLYP53396 1101 aa20.57■□□□□ 0.88
CCDC78-206ENST00000463539 JAM2P57087 298 aa20.57■□□□□ 0.88
CCDC78-206ENST00000463539 OSTNP61366 133 aa20.57■□□□□ 0.88
CCDC78-206ENST00000463539 ASIC2Q16515 512 aa20.57■□□□□ 0.88
CCDC78-206ENST00000463539 SLC9C1Q4G0N8 1177 aa20.57■□□□□ 0.88
CCDC78-206ENST00000463539 PHLDB3Q6NSJ2 640 aa20.57■□□□□ 0.88
CCDC78-206ENST00000463539 C15orf39Q6ZRI6 1047 aa20.57■□□□□ 0.88
CCDC78-206ENST00000463539 GPIHBP1Q8IV16 184 aa20.57■□□□□ 0.88
CCDC78-206ENST00000463539 CCDC170Q8IYT3 715 aa20.57■□□□□ 0.88
CCDC78-206ENST00000463539 CEP120Q8N960 986 aa20.57■□□□□ 0.88
CCDC78-206ENST00000463539 ZNF516Q92618 1163 aa20.57■□□□□ 0.88
CCDC78-206ENST00000463539 CCDC42Q96M95 316 aa20.57■□□□□ 0.88
CCDC78-206ENST00000463539 STK33Q9BYT3 514 aa20.57■□□□□ 0.88
CCDC78-206ENST00000463539 RAB20Q9NX57 234 aa20.57■□□□□ 0.88
CCDC78-206ENST00000463539 AIPL1Q9NZN9 384 aa20.57■□□□□ 0.88
CCDC78-206ENST00000463539 ARHGAP20Q9P2F6 1191 aa20.57■□□□□ 0.88
CCDC78-206ENST00000463539 ADGRG1Q9Y653 693 aa20.57■□□□□ 0.88
CCDC78-206ENST00000463539 EPN1Q9Y6I3 576 aaPredicted RBP20.57■□□□□ 0.88
CCDC78-206ENST00000463539 NDUFA10O95299 355 aa20.56■□□□□ 0.88
CCDC78-206ENST00000463539 CYLC1P35663 651 aaPredicted RBP20.56■□□□□ 0.88
CCDC78-206ENST00000463539 CRYBB1P53674 252 aaPredicted RBP20.56■□□□□ 0.88
CCDC78-206ENST00000463539 BIRC3Q13489 604 aa20.56■□□□□ 0.88
CCDC78-206ENST00000463539 SNX17Q15036 470 aa20.56■□□□□ 0.88
CCDC78-206ENST00000463539 SURF1Q15526 300 aa20.56■□□□□ 0.88
CCDC78-206ENST00000463539 ZACNQ401N2 412 aa20.56■□□□□ 0.88
CCDC78-206ENST00000463539 LHX8Q68G74 356 aa20.56■□□□□ 0.88
CCDC78-206ENST00000463539 RSPH3Q86UC2 560 aa20.56■□□□□ 0.88
CCDC78-206ENST00000463539 WDR49Q8IV35 697 aa20.56■□□□□ 0.88
CCDC78-206ENST00000463539 SEMA4DQ92854 862 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms