RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 TCHPQ9BT92 498 aa20.66■□□□□ 0.9
COL9A3-203ENST00000462700 ZBP1Q9H171 429 aa20.66■□□□□ 0.9
COL9A3-203ENST00000462700 CXCL16Q9H2A7 254 aa20.66■□□□□ 0.9
COL9A3-203ENST00000462700 TLE6Q9H808 572 aa20.66■□□□□ 0.9
COL9A3-203ENST00000462700 MARCH5Q9NX47 278 aa20.66■□□□□ 0.9
COL9A3-203ENST00000462700 RCOR1Q9UKL0 485 aa20.66■□□□□ 0.9
COL9A3-203ENST00000462700 PRG3Q9Y2Y8 225 aaPredicted RBP20.66■□□□□ 0.9
COL9A3-203ENST00000462700 HIDE1A8MVS5 230 aa20.65■□□□□ 0.9
COL9A3-203ENST00000462700 PER2O15055 1255 aa20.65■□□□□ 0.9
COL9A3-203ENST00000462700 LTBRP36941 435 aa20.65■□□□□ 0.9
COL9A3-203ENST00000462700 ADAM15Q13444 863 aa20.65■□□□□ 0.9
COL9A3-203ENST00000462700 E2F4Q16254 413 aa20.65■□□□□ 0.9
COL9A3-203ENST00000462700 DUSP6Q16828 381 aa20.65■□□□□ 0.9
COL9A3-203ENST00000462700 LEXMQ3ZCV2 418 aa20.65■□□□□ 0.9
COL9A3-203ENST00000462700 EFHBQ8N7U6 833 aa20.65■□□□□ 0.9
COL9A3-203ENST00000462700 DNAJC19Q96DA6 116 aa20.65■□□□□ 0.9
COL9A3-203ENST00000462700 ZBTB45Q96K62 511 aaPredicted RBP20.65■□□□□ 0.9
COL9A3-203ENST00000462700 CDCA3Q99618 268 aaPredicted RBP20.65■□□□□ 0.9
COL9A3-203ENST00000462700 VN1R3Q9BXE9 311 aa20.65■□□□□ 0.9
COL9A3-203ENST00000462700 COL25A1Q9BXS0 654 aaPredicted RBP20.65■□□□□ 0.9
COL9A3-203ENST00000462700 ANKFY1Q9P2R3 1169 aa20.65■□□□□ 0.9
COL9A3-203ENST00000462700 STK39Q9UEW8 545 aa20.65■□□□□ 0.9
COL9A3-203ENST00000462700 TBX20Q9UMR3 447 aa20.65■□□□□ 0.9
COL9A3-203ENST00000462700 H3BQ06 376 aaPredicted RBP20.64■□□□□ 0.89
COL9A3-203ENST00000462700 NR1I2O75469 434 aa20.64■□□□□ 0.89
COL9A3-203ENST00000462700 THP07101 528 aa20.64■□□□□ 0.89
COL9A3-203ENST00000462700 BMP1P13497 986 aa20.64■□□□□ 0.89
COL9A3-203ENST00000462700 NMT1P30419 496 aaKnown RBP20.64■□□□□ 0.89
COL9A3-203ENST00000462700 SFR1Q86XK3 245 aa20.64■□□□□ 0.89
COL9A3-203ENST00000462700 MRPL43Q8N983 215 aaKnown RBP20.64■□□□□ 0.89
COL9A3-203ENST00000462700 BICD1Q96G01 975 aa20.64■□□□□ 0.89
COL9A3-203ENST00000462700 CCDC94Q9BW85 323 aaPredicted RBP20.64■□□□□ 0.89
COL9A3-203ENST00000462700 CUEDC2Q9H467 287 aa20.64■□□□□ 0.89
COL9A3-203ENST00000462700 VCANP13611 3396 aa20.63■□□□□ 0.89
COL9A3-203ENST00000462700 FSD2A1L4K1 749 aa20.63■□□□□ 0.89
COL9A3-203ENST00000462700 C2orf71A6NGG8 1288 aa20.63■□□□□ 0.89
COL9A3-203ENST00000462700 TBX10O75333 385 aa20.63■□□□□ 0.89
COL9A3-203ENST00000462700 CTSAP10619 480 aa20.63■□□□□ 0.89
COL9A3-203ENST00000462700 HARSP12081 509 aaKnown RBP20.63■□□□□ 0.89
COL9A3-203ENST00000462700 ABCD1P33897 745 aa20.63■□□□□ 0.89
COL9A3-203ENST00000462700 OSTNP61366 133 aa20.63■□□□□ 0.89
COL9A3-203ENST00000462700 KRT85P78386 507 aa20.63■□□□□ 0.89
COL9A3-203ENST00000462700 GTF2BQ00403 316 aa20.63■□□□□ 0.89
COL9A3-203ENST00000462700 DLX2Q07687 328 aaPredicted RBP20.63■□□□□ 0.89
COL9A3-203ENST00000462700 MCL1Q07820 350 aa20.63■□□□□ 0.89
COL9A3-203ENST00000462700 TUSC3Q13454 348 aa20.63■□□□□ 0.89
COL9A3-203ENST00000462700 BMS1Q14692 1282 aaKnown RBP20.63■□□□□ 0.89
COL9A3-203ENST00000462700 NOLC1Q14978 699 aaKnown RBP eCLIP20.63■□□□□ 0.89
COL9A3-203ENST00000462700 NAB2Q15742 525 aa20.63■□□□□ 0.89
COL9A3-203ENST00000462700 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.63■□□□□ 0.89
COL9A3-203ENST00000462700 DHX58Q96C10 678 aa20.63■□□□□ 0.89
COL9A3-203ENST00000462700 CHAMP1Q96JM3 812 aa20.63■□□□□ 0.89
COL9A3-203ENST00000462700 TNMDQ9H2S6 317 aa20.63■□□□□ 0.89
COL9A3-203ENST00000462700 ST6GALNAC4Q9H4F1 302 aa20.63■□□□□ 0.89
COL9A3-203ENST00000462700 TOPORSQ9NS56 1045 aaPredicted RBP20.63■□□□□ 0.89
COL9A3-203ENST00000462700 SEL1LQ9UBV2 794 aa20.63■□□□□ 0.89
COL9A3-203ENST00000462700 F8W810 466 aa20.62■□□□□ 0.89
COL9A3-203ENST00000462700 CLDN3O15551 220 aa20.62■□□□□ 0.89
COL9A3-203ENST00000462700 CXCL14O95715 111 aa20.62■□□□□ 0.89
COL9A3-203ENST00000462700 GLP2RO95838 553 aa20.62■□□□□ 0.89
COL9A3-203ENST00000462700 PIGRP01833 764 aa20.62■□□□□ 0.89
COL9A3-203ENST00000462700 GAP43P17677 238 aa20.62■□□□□ 0.89
COL9A3-203ENST00000462700 CA8P35219 290 aa20.62■□□□□ 0.89
COL9A3-203ENST00000462700 NDUFV1P49821 464 aa20.62■□□□□ 0.89
COL9A3-203ENST00000462700 LIG4P49917 911 aa20.62■□□□□ 0.89
COL9A3-203ENST00000462700 YARSP54577 528 aaKnown RBP20.62■□□□□ 0.89
COL9A3-203ENST00000462700 RESP18Q5W5W9 173 aa20.62■□□□□ 0.89
COL9A3-203ENST00000462700 MAP4K3Q8IVH8 894 aa20.62■□□□□ 0.89
COL9A3-203ENST00000462700 IQUBQ8NA54 791 aa20.62■□□□□ 0.89
COL9A3-203ENST00000462700 AUTS2Q8WXX7 1259 aa20.62■□□□□ 0.89
COL9A3-203ENST00000462700 COLEC11Q9BWP8 271 aa20.62■□□□□ 0.89
COL9A3-203ENST00000462700 HAPLN2Q9GZV7 340 aa20.62■□□□□ 0.89
COL9A3-203ENST00000462700 KBTBD4Q9NVX7 518 aa20.62■□□□□ 0.89
COL9A3-203ENST00000462700 FAM13BQ9NYF5 915 aa20.62■□□□□ 0.89
COL9A3-203ENST00000462700 CACNG4Q9UBN1 327 aa20.62■□□□□ 0.89
COL9A3-203ENST00000462700 ATP6V1DQ9Y5K8 247 aa20.62■□□□□ 0.89
COL9A3-203ENST00000462700 IRAK3Q9Y616 596 aa20.62■□□□□ 0.89
COL9A3-203ENST00000462700 MYH11P35749 1972 aa20.62■□□□□ 0.89
COL9A3-203ENST00000462700 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.61■□□□□ 0.89
COL9A3-203ENST00000462700 FRMD3A2A2Y4 597 aa20.61■□□□□ 0.89
COL9A3-203ENST00000462700 CASTOR2A6NHX0 329 aa20.61■□□□□ 0.89
COL9A3-203ENST00000462700 DLL1O00548 723 aa20.61■□□□□ 0.89
COL9A3-203ENST00000462700 HNRNPDLO14979 420 aaKnown RBP20.61■□□□□ 0.89
COL9A3-203ENST00000462700 EFEMP2O95967 443 aa20.61■□□□□ 0.89
COL9A3-203ENST00000462700 SOD2P04179 222 aa20.61■□□□□ 0.89
COL9A3-203ENST00000462700 IDEP14735 1019 aa20.61■□□□□ 0.89
COL9A3-203ENST00000462700 ZC2HC1CQ53FD0 456 aaPredicted RBP20.61■□□□□ 0.89
COL9A3-203ENST00000462700 XKR4Q5GH76 650 aa20.61■□□□□ 0.89
COL9A3-203ENST00000462700 GLRA4Q5JXX5 417 aa20.61■□□□□ 0.89
COL9A3-203ENST00000462700 ALKAL1Q6UXT8 129 aa20.61■□□□□ 0.89
COL9A3-203ENST00000462700 ZNF720Q7Z2F6 126 aa20.61■□□□□ 0.89
COL9A3-203ENST00000462700 RNF168Q8IYW5 571 aaPredicted RBP20.61■□□□□ 0.89
COL9A3-203ENST00000462700 VN1R2Q8NFZ6 395 aa20.61■□□□□ 0.89
COL9A3-203ENST00000462700 ADAMTS19Q8TE59 1207 aa20.61■□□□□ 0.89
COL9A3-203ENST00000462700 LEO1Q8WVC0 666 aaPredicted RBP20.61■□□□□ 0.89
COL9A3-203ENST00000462700 RABGGTAQ92696 567 aa20.61■□□□□ 0.89
COL9A3-203ENST00000462700 STAMQ92783 540 aa20.61■□□□□ 0.89
COL9A3-203ENST00000462700 SNX27Q96L92 541 aa20.61■□□□□ 0.89
COL9A3-203ENST00000462700 SPATA32Q96LK8 384 aa20.61■□□□□ 0.89
COL9A3-203ENST00000462700 ACAP3Q96P50 834 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms