RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 PMM2O15305 246 aa16.27■□□□□ 0.2
RPRD1B-203ENST00000462548 P4HA2O15460 535 aa16.27■□□□□ 0.2
RPRD1B-203ENST00000462548 FKTNO75072 461 aa16.27■□□□□ 0.2
RPRD1B-203ENST00000462548 LDHAP00338 332 aaKnown RBP16.27■□□□□ 0.2
RPRD1B-203ENST00000462548 JAM2P57087 298 aa16.27■□□□□ 0.2
RPRD1B-203ENST00000462548 RAPGEF1Q13905 1077 aa16.27■□□□□ 0.2
RPRD1B-203ENST00000462548 SV2AQ7L0J3 742 aa16.27■□□□□ 0.2
RPRD1B-203ENST00000462548 KLHDC9Q8NEP7 349 aa16.27■□□□□ 0.2
RPRD1B-203ENST00000462548 ELMO3Q96BJ8 720 aa16.27■□□□□ 0.2
RPRD1B-203ENST00000462548 CPB2Q96IY4 423 aa16.27■□□□□ 0.2
RPRD1B-203ENST00000462548 CDT1Q9H211 546 aa16.27■□□□□ 0.2
RPRD1B-203ENST00000462548 TMEM8AQ9HCN3 771 aa16.27■□□□□ 0.2
RPRD1B-203ENST00000462548 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.27■□□□□ 0.27e-7■■■■■ 72.3
RPRD1B-203ENST00000462548 TNFSF13BQ9Y275 285 aa16.27■□□□□ 0.2
RPRD1B-203ENST00000462548 EPN1Q9Y6I3 576 aaPredicted RBP16.27■□□□□ 0.2
RPRD1B-203ENST00000462548 C17orf102A2RUQ5 167 aa16.27■□□□□ 0.19
RPRD1B-203ENST00000462548 ZEB2O60315 1214 aa16.27■□□□□ 0.19
RPRD1B-203ENST00000462548 KPNA6O60684 536 aa16.27■□□□□ 0.19
RPRD1B-203ENST00000462548 N4BP1O75113 896 aaKnown RBP16.27■□□□□ 0.19
RPRD1B-203ENST00000462548 PNMA6AP0CW24 399 aaPredicted RBP16.27■□□□□ 0.19
RPRD1B-203ENST00000462548 CLDN10P78369 228 aa16.27■□□□□ 0.19
RPRD1B-203ENST00000462548 NBPF20Q3BBV1 942 aa16.27■□□□□ 0.19
RPRD1B-203ENST00000462548 SFMBT2Q5VUG0 894 aa16.27■□□□□ 0.19
RPRD1B-203ENST00000462548 CCSAPQ6IQ19 270 aaPredicted RBP16.27■□□□□ 0.19
RPRD1B-203ENST00000462548 C15orf39Q6ZRI6 1047 aa16.27■□□□□ 0.19
RPRD1B-203ENST00000462548 NYAP1Q6ZVC0 841 aa16.27■□□□□ 0.19
RPRD1B-203ENST00000462548 ZNF410Q86VK4 478 aa16.27■□□□□ 0.19
RPRD1B-203ENST00000462548 ARHGEF19Q8IW93 802 aa16.27■□□□□ 0.19
RPRD1B-203ENST00000462548 C7orf31Q8N865 590 aa16.27■□□□□ 0.19
RPRD1B-203ENST00000462548 ERO1AQ96HE7 468 aa16.27■□□□□ 0.19
RPRD1B-203ENST00000462548 SCLT1Q96NL6 688 aa16.27■□□□□ 0.19
RPRD1B-203ENST00000462548 PDCL3Q9H2J4 239 aa16.27■□□□□ 0.19
RPRD1B-203ENST00000462548 OGTO15294 1046 aa16.26■□□□□ 0.19
RPRD1B-203ENST00000462548 NDUFA10O95299 355 aa16.26■□□□□ 0.19
RPRD1B-203ENST00000462548 ARF4P18085 180 aaPredicted RBP16.26■□□□□ 0.19
RPRD1B-203ENST00000462548 ENPEPQ07075 957 aa16.26■□□□□ 0.19
RPRD1B-203ENST00000462548 ZNF568Q3ZCX4 644 aa16.26■□□□□ 0.19
RPRD1B-203ENST00000462548 KRT39Q6A163 491 aa16.26■□□□□ 0.19
RPRD1B-203ENST00000462548 TMEM192Q8IY95 271 aa16.26■□□□□ 0.19
RPRD1B-203ENST00000462548 TAS1R2Q8TE23 839 aa16.26■□□□□ 0.19
RPRD1B-203ENST00000462548 GPR88Q9GZN0 384 aa16.26■□□□□ 0.19
RPRD1B-203ENST00000462548 PDZD7Q9H5P4 517 aa16.26■□□□□ 0.19
RPRD1B-203ENST00000462548 SPC25Q9HBM1 224 aa16.26■□□□□ 0.19
RPRD1B-203ENST00000462548 DNAJC12Q9UKB3 198 aa16.26■□□□□ 0.19
RPRD1B-203ENST00000462548 CPSF3Q9UKF6 684 aaKnown RBP16.26■□□□□ 0.19
RPRD1B-203ENST00000462548 GINS2Q9Y248 185 aa16.26■□□□□ 0.19
RPRD1B-203ENST00000462548 COQ4Q9Y3A0 265 aa16.26■□□□□ 0.19
RPRD1B-203ENST00000462548 TSPAN1O60635 241 aa16.26■□□□□ 0.19
RPRD1B-203ENST00000462548 MYCNP04198 464 aaPredicted RBP16.26■□□□□ 0.19
RPRD1B-203ENST00000462548 EIF4A3P38919 411 aaKnown RBP16.26■□□□□ 0.19
RPRD1B-203ENST00000462548 TMEM132AQ24JP5 1023 aa16.26■□□□□ 0.19
RPRD1B-203ENST00000462548 SCARA3Q6AZY7 606 aa16.26■□□□□ 0.19
RPRD1B-203ENST00000462548 BRSK2Q8IWQ3 736 aa16.26■□□□□ 0.19
RPRD1B-203ENST00000462548 THNSL1Q8IYQ7 743 aa16.26■□□□□ 0.19
RPRD1B-203ENST00000462548 PXYLP1Q8TE99 480 aa16.26■□□□□ 0.19
RPRD1B-203ENST00000462548 SYN2Q92777 582 aaPredicted RBP16.26■□□□□ 0.19
RPRD1B-203ENST00000462548 AIPL1Q9NZN9 384 aa16.26■□□□□ 0.19
RPRD1B-203ENST00000462548 APEX2Q9UBZ4 518 aa16.26■□□□□ 0.19
RPRD1B-203ENST00000462548 ASGR1P07306 291 aa16.25■□□□□ 0.19
RPRD1B-203ENST00000462548 GTF2H1P32780 548 aa16.25■□□□□ 0.19
RPRD1B-203ENST00000462548 ARID5AQ03989 594 aa16.25■□□□□ 0.19
RPRD1B-203ENST00000462548 KCNA10Q16322 511 aa16.25■□□□□ 0.19
RPRD1B-203ENST00000462548 SRGAP1Q7Z6B7 1085 aa16.25■□□□□ 0.19
RPRD1B-203ENST00000462548 OSMRQ99650 979 aa16.25■□□□□ 0.19
RPRD1B-203ENST00000462548 SAGE1Q9NXZ1 904 aa16.25■□□□□ 0.19
RPRD1B-203ENST00000462548 ZNF263O14978 683 aa16.25■□□□□ 0.19
RPRD1B-203ENST00000462548 MEFVO15553 781 aaPredicted RBP16.25■□□□□ 0.19
RPRD1B-203ENST00000462548 ZSCAN12O43309 604 aa16.25■□□□□ 0.19
RPRD1B-203ENST00000462548 ABL1P00519 1130 aa16.25■□□□□ 0.19
RPRD1B-203ENST00000462548 GNRH1P01148 92 aa16.25■□□□□ 0.19
RPRD1B-203ENST00000462548 C4BPAP04003 597 aaKnown RBP16.25■□□□□ 0.19
RPRD1B-203ENST00000462548 CCDC175P0C221 793 aa16.25■□□□□ 0.19
RPRD1B-203ENST00000462548 OSTNP61366 133 aa16.25■□□□□ 0.19
RPRD1B-203ENST00000462548 IRF2BP2Q7Z5L9 587 aa16.25■□□□□ 0.19
RPRD1B-203ENST00000462548 OR5B17Q8NGF7 314 aa16.25■□□□□ 0.19
RPRD1B-203ENST00000462548 TMEM40Q8WWA1 233 aa16.25■□□□□ 0.19
RPRD1B-203ENST00000462548 KAT5Q92993 513 aa16.25■□□□□ 0.19
RPRD1B-203ENST00000462548 PRIMPOLQ96LW4 560 aa16.25■□□□□ 0.19
RPRD1B-203ENST00000462548 SPAG5Q96R06 1193 aa16.25■□□□□ 0.19
RPRD1B-203ENST00000462548 FNBP1Q96RU3 617 aa16.25■□□□□ 0.19
RPRD1B-203ENST00000462548 NUCKS1Q9H1E3 243 aaKnown RBP16.25■□□□□ 0.19
RPRD1B-203ENST00000462548 DDX20Q9UHI6 824 aaKnown RBP16.25■□□□□ 0.19
RPRD1B-203ENST00000462548 OFD1O75665 1012 aa16.24■□□□□ 0.19
RPRD1B-203ENST00000462548 INHAP05111 366 aa16.24■□□□□ 0.19
RPRD1B-203ENST00000462548 TNNI1P19237 187 aa16.24■□□□□ 0.19
RPRD1B-203ENST00000462548 ENOX2Q16206 610 aaKnown RBP16.24■□□□□ 0.19
RPRD1B-203ENST00000462548 ASTE1Q2TB18 679 aaPredicted RBP16.24■□□□□ 0.19
RPRD1B-203ENST00000462548 TDRD10Q5VZ19 366 aaKnown RBP16.24■□□□□ 0.19
RPRD1B-203ENST00000462548 GDF6Q6KF10 455 aaPredicted RBP16.24■□□□□ 0.19
RPRD1B-203ENST00000462548 CGRRF1Q99675 332 aa16.24■□□□□ 0.19
RPRD1B-203ENST00000462548 GTF2IRD1Q9UHL9 959 aa16.24■□□□□ 0.19
RPRD1B-203ENST00000462548 TFR2Q9UP52 801 aa16.24■□□□□ 0.19
RPRD1B-203ENST00000462548 GRIN2DO15399 1336 aa16.24■□□□□ 0.19
RPRD1B-203ENST00000462548 CST5P28325 142 aaPredicted RBP16.24■□□□□ 0.19
RPRD1B-203ENST00000462548 CETN1Q12798 172 aa16.24■□□□□ 0.19
RPRD1B-203ENST00000462548 DRAP1Q14919 205 aaPredicted RBP16.24■□□□□ 0.19
RPRD1B-203ENST00000462548 ASIC2Q16515 512 aa16.24■□□□□ 0.19
RPRD1B-203ENST00000462548 ZACNQ401N2 412 aa16.24■□□□□ 0.19
RPRD1B-203ENST00000462548 USP37Q86T82 979 aa16.24■□□□□ 0.19
RPRD1B-203ENST00000462548 FBXL13Q8NEE6 735 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms