RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 EPHA7Q15375 998 aa6.14□□□□□ -1.43
COPS3-204ENST00000462236 PROSER3Q2NL68 480 aa6.14□□□□□ -1.43
COPS3-204ENST00000462236 ATP13A4Q4VNC1 1196 aa6.14□□□□□ -1.43
COPS3-204ENST00000462236 CC2D1BQ5T0F9 858 aaKnown RBP6.14□□□□□ -1.43
COPS3-204ENST00000462236 B3GNT8Q7Z7M8 397 aa6.14□□□□□ -1.43
COPS3-204ENST00000462236 BHLHE22Q8NFJ8 381 aaPredicted RBP6.14□□□□□ -1.43
COPS3-204ENST00000462236 TBC1D16Q8TBP0 767 aa6.14□□□□□ -1.43
COPS3-204ENST00000462236 MZB1Q8WU39 189 aa6.14□□□□□ -1.43
COPS3-204ENST00000462236 RTF1Q92541 710 aaKnown RBP6.14□□□□□ -1.43
COPS3-204ENST00000462236 ZNF333Q96JL9 665 aa6.14□□□□□ -1.43
COPS3-204ENST00000462236 EMC7Q9NPA0 242 aa6.14□□□□□ -1.43
COPS3-204ENST00000462236 ASB1Q9Y576 335 aa6.14□□□□□ -1.43
COPS3-204ENST00000462236 CLSPNQ9HAW4 1339 aa6.14□□□□□ -1.43
COPS3-204ENST00000462236 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.13□□□□□ -1.43
COPS3-204ENST00000462236 DVL2O14641 736 aa6.13□□□□□ -1.43
COPS3-204ENST00000462236 FOXP2O15409 715 aa6.13□□□□□ -1.43
COPS3-204ENST00000462236 ENO2P09104 434 aaPredicted RBP6.13□□□□□ -1.43
COPS3-204ENST00000462236 CYP2C8P10632 490 aa6.13□□□□□ -1.43
COPS3-204ENST00000462236 GLDCP23378 1020 aa6.13□□□□□ -1.43
COPS3-204ENST00000462236 IGFBP6P24592 240 aaPredicted RBP6.13□□□□□ -1.43
COPS3-204ENST00000462236 LSP1P33241 339 aa6.13□□□□□ -1.43
COPS3-204ENST00000462236 CDR1P51861 262 aa6.13□□□□□ -1.43
COPS3-204ENST00000462236 SESN3P58005 492 aa6.13□□□□□ -1.43
COPS3-204ENST00000462236 SMAD3P84022 425 aaKnown RBP6.13□□□□□ -1.43
COPS3-204ENST00000462236 DBPQ10586 325 aaPredicted RBP6.13□□□□□ -1.43
COPS3-204ENST00000462236 TCIRG1Q13488 830 aa6.13□□□□□ -1.43
COPS3-204ENST00000462236 SEC23AQ15436 765 aa6.13□□□□□ -1.43
COPS3-204ENST00000462236 SMAD2Q15796 467 aaKnown RBP6.13□□□□□ -1.43
COPS3-204ENST00000462236 CR1LQ2VPA4 569 aa6.13□□□□□ -1.43
COPS3-204ENST00000462236 SKOR2Q2VWA4 1001 aaPredicted RBP6.13□□□□□ -1.43
COPS3-204ENST00000462236 XP32Q5T750 250 aa6.13□□□□□ -1.43
COPS3-204ENST00000462236 RBM12BQ8IXT5 1001 aaKnown RBP6.13□□□□□ -1.43
COPS3-204ENST00000462236 PRPF38AQ8NAV1 312 aaKnown RBP6.13□□□□□ -1.43
COPS3-204ENST00000462236 PNISRQ8TF01 805 aaKnown RBP6.13□□□□□ -1.43
COPS3-204ENST00000462236 ZBED3Q96IU2 234 aaPredicted RBP6.13□□□□□ -1.43
COPS3-204ENST00000462236 TMEM209Q96SK2 561 aa6.13□□□□□ -1.43
COPS3-204ENST00000462236 EYA3Q99504 573 aa6.13□□□□□ -1.43
COPS3-204ENST00000462236 THUMPD2Q9BTF0 503 aaKnown RBP6.13□□□□□ -1.43
COPS3-204ENST00000462236 KRTAP9-2Q9BYQ4 174 aa6.13□□□□□ -1.43
COPS3-204ENST00000462236 PUS7LQ9H0K6 701 aaKnown RBP6.13□□□□□ -1.43
COPS3-204ENST00000462236 MYOZ2Q9NPC6 264 aa6.13□□□□□ -1.43
COPS3-204ENST00000462236 SPTLC3Q9NUV7 552 aa6.13□□□□□ -1.43
COPS3-204ENST00000462236 USP36Q9P275 1121 aaKnown RBP6.13□□□□□ -1.43
COPS3-204ENST00000462236 TRIM17Q9Y577 477 aa6.13□□□□□ -1.43
COPS3-204ENST00000462236 SH3TC1Q8TE82 1336 aa6.13□□□□□ -1.43
COPS3-204ENST00000462236 COL1A1P02452 1464 aaPredicted RBP6.13□□□□□ -1.43
COPS3-204ENST00000462236 KRTAP9-6A0A140TA67 174 aa6.12□□□□□ -1.43
COPS3-204ENST00000462236 H0YGN5 161 aa6.12□□□□□ -1.43
COPS3-204ENST00000462236 K7ESF4 209 aa6.12□□□□□ -1.43
COPS3-204ENST00000462236 WNT10BO00744 389 aa6.12□□□□□ -1.43
COPS3-204ENST00000462236 KCNK3O14649 394 aa6.12□□□□□ -1.43
COPS3-204ENST00000462236 KRT37O76014 449 aa6.12□□□□□ -1.43
COPS3-204ENST00000462236 MED14OSP0DP75 135 aa6.12□□□□□ -1.43
COPS3-204ENST00000462236 CD40P25942 277 aa6.12□□□□□ -1.43
COPS3-204ENST00000462236 AOAHP28039 575 aa6.12□□□□□ -1.43
COPS3-204ENST00000462236 INHBEP58166 350 aa6.12□□□□□ -1.43
COPS3-204ENST00000462236 DLG4P78352 724 aa6.12□□□□□ -1.43
COPS3-204ENST00000462236 GRIN1Q05586 938 aa6.12□□□□□ -1.43
COPS3-204ENST00000462236 HSP90AB3PQ58FF7 597 aa6.12□□□□□ -1.43
COPS3-204ENST00000462236 AK9Q5TCS8 1911 aa6.12□□□□□ -1.43
COPS3-204ENST00000462236 PRAMEF18Q5VWM3 479 aa6.12□□□□□ -1.43
COPS3-204ENST00000462236 CPZQ66K79 652 aa6.12□□□□□ -1.43
COPS3-204ENST00000462236 UBE2Q1Q7Z7E8 422 aa6.12□□□□□ -1.43
COPS3-204ENST00000462236 KRTAP1-3Q8IUG1 177 aa6.12□□□□□ -1.43
COPS3-204ENST00000462236 RPUSD2Q8IZ73 545 aaKnown RBP6.12□□□□□ -1.43
COPS3-204ENST00000462236 ZNF610Q8N9Z0 462 aa6.12□□□□□ -1.43
COPS3-204ENST00000462236 SLC5A5Q92911 643 aa6.12□□□□□ -1.43
COPS3-204ENST00000462236 FAM84AQ96KN4 292 aa6.12□□□□□ -1.43
COPS3-204ENST00000462236 C16orf92Q96LL3 132 aa6.12□□□□□ -1.43
COPS3-204ENST00000462236 WRNIP1Q96S55 665 aa6.12□□□□□ -1.43
COPS3-204ENST00000462236 PLEKHF1Q96S99 279 aa6.12□□□□□ -1.43
COPS3-204ENST00000462236 PPP1R16BQ96T49 567 aa6.12□□□□□ -1.43
COPS3-204ENST00000462236 ELF4Q99607 663 aaPredicted RBP6.12□□□□□ -1.43
COPS3-204ENST00000462236 ISCA1Q9BUE6 129 aa6.12□□□□□ -1.43
COPS3-204ENST00000462236 TRMT112Q9UI30 125 aaKnown RBP6.12□□□□□ -1.43
COPS3-204ENST00000462236 SCAF8Q9UPN6 1271 aaKnown RBP6.12□□□□□ -1.43
COPS3-204ENST00000462236 FAN1Q9Y2M0 1017 aa6.12□□□□□ -1.43
COPS3-204ENST00000462236 EYSQ5T1H1 3165 aa6.12□□□□□ -1.43
COPS3-204ENST00000462236 CDH23Q9H251 3354 aa6.11□□□□□ -1.43
COPS3-204ENST00000462236 PRAMEF25A6NGN4 478 aa6.11□□□□□ -1.43
COPS3-204ENST00000462236 MANSC4A6NHS7 340 aaPredicted RBP6.11□□□□□ -1.43
COPS3-204ENST00000462236 TGM5O43548 720 aa6.11□□□□□ -1.43
COPS3-204ENST00000462236 ANXA1P04083 346 aa6.11□□□□□ -1.43
COPS3-204ENST00000462236 CDKN1CP49918 316 aaPredicted RBP6.11□□□□□ -1.43
COPS3-204ENST00000462236 RPS8P62241 208 aaKnown RBP6.11□□□□□ -1.43
COPS3-204ENST00000462236 TMEM132BQ14DG7 1078 aa6.11□□□□□ -1.43
COPS3-204ENST00000462236 TERF2Q15554 542 aa6.11□□□□□ -1.43
COPS3-204ENST00000462236 CATSPEREQ5SY80 951 aa6.11□□□□□ -1.43
COPS3-204ENST00000462236 CD276Q5ZPR3 534 aa6.11□□□□□ -1.43
COPS3-204ENST00000462236 VASNQ6EMK4 673 aa6.11□□□□□ -1.43
COPS3-204ENST00000462236 FSTL4Q6MZW2 842 aa6.11□□□□□ -1.43
COPS3-204ENST00000462236 CD300LDQ6UXZ3 194 aa6.11□□□□□ -1.43
COPS3-204ENST00000462236 IGDCC3Q8IVU1 814 aa6.11□□□□□ -1.43
COPS3-204ENST00000462236 CD99L2Q8TCZ2 262 aa6.11□□□□□ -1.43
COPS3-204ENST00000462236 IGDCC4Q8TDY8 1250 aa6.11□□□□□ -1.43
COPS3-204ENST00000462236 KCNN1Q92952 543 aa6.11□□□□□ -1.43
COPS3-204ENST00000462236 ERO1AQ96HE7 468 aa6.11□□□□□ -1.43
COPS3-204ENST00000462236 MENTQ9BUN1 341 aa6.11□□□□□ -1.43
COPS3-204ENST00000462236 FAM126AQ9BYI3 521 aaPredicted RBP6.11□□□□□ -1.43
COPS3-204ENST00000462236 GCM1Q9NP62 436 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms