RNA–Protein interactions for RNA: ENST00000462202.2

TRIM8-202, Transcript of tripartite motif containing 8, humanhuman

TSL 5

Gene TRIM8, Length 891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-202ENST00000462202 LIG4P49917 911 aa23.72■■□□□ 1.39
TRIM8-202ENST00000462202 SHC4Q6S5L8 630 aa23.72■■□□□ 1.39
TRIM8-202ENST00000462202 DDX53Q86TM3 631 aaKnown RBP23.72■■□□□ 1.39
TRIM8-202ENST00000462202 SFR1Q86XK3 245 aa23.72■■□□□ 1.39
TRIM8-202ENST00000462202 CEP120Q8N960 986 aa23.72■■□□□ 1.39
TRIM8-202ENST00000462202 AUTS2Q8WXX7 1259 aa23.72■■□□□ 1.39
TRIM8-202ENST00000462202 RABGGTAQ92696 567 aa23.72■■□□□ 1.39
TRIM8-202ENST00000462202 STAMQ92783 540 aa23.72■■□□□ 1.39
TRIM8-202ENST00000462202 COLEC11Q9BWP8 271 aa23.72■■□□□ 1.39
TRIM8-202ENST00000462202 FAM13BQ9NYF5 915 aa23.72■■□□□ 1.39
TRIM8-202ENST00000462202 PCDHA7Q9UN72 937 aa23.72■■□□□ 1.39
TRIM8-202ENST00000462202 ZDHHC9Q9Y397 364 aa23.72■■□□□ 1.39
TRIM8-202ENST00000462202 ZMYM2Q9UBW7 1377 aa23.71■■□□□ 1.39
TRIM8-202ENST00000462202 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.71■■□□□ 1.39
TRIM8-202ENST00000462202 CASTOR2A6NHX0 329 aa23.71■■□□□ 1.39
TRIM8-202ENST00000462202 HNRNPDLO14979 420 aaKnown RBP23.71■■□□□ 1.39
TRIM8-202ENST00000462202 CLDN3O15551 220 aa23.71■■□□□ 1.39
TRIM8-202ENST00000462202 TOM1L1O75674 476 aa23.71■■□□□ 1.39
TRIM8-202ENST00000462202 THP07101 528 aa23.71■■□□□ 1.39
TRIM8-202ENST00000462202 MCF2P10911 925 aa23.71■■□□□ 1.39
TRIM8-202ENST00000462202 KRT85P78386 507 aa23.71■■□□□ 1.39
TRIM8-202ENST00000462202 NOLC1Q14978 699 aaKnown RBP eCLIP23.71■■□□□ 1.39
TRIM8-202ENST00000462202 TPRNQ4KMQ1 711 aa23.71■■□□□ 1.39
TRIM8-202ENST00000462202 GLRA4Q5JXX5 417 aa23.71■■□□□ 1.39
TRIM8-202ENST00000462202 GSTCDQ8NEC7 633 aa23.71■■□□□ 1.39
TRIM8-202ENST00000462202 CHAMP1Q96JM3 812 aa23.71■■□□□ 1.39
TRIM8-202ENST00000462202 COL25A1Q9BXS0 654 aaPredicted RBP23.71■■□□□ 1.39
TRIM8-202ENST00000462202 PTPRHQ9HD43 1115 aa23.71■■□□□ 1.39
TRIM8-202ENST00000462202 TOPORSQ9NS56 1045 aaPredicted RBP23.71■■□□□ 1.39
TRIM8-202ENST00000462202 TBC1D7Q9P0N9 293 aa23.71■■□□□ 1.39
TRIM8-202ENST00000462202 TBX20Q9UMR3 447 aa23.71■■□□□ 1.39
TRIM8-202ENST00000462202 ATP6V1DQ9Y5K8 247 aa23.71■■□□□ 1.39
TRIM8-202ENST00000462202 XIRP2A4UGR9 3374 aa23.7■■□□□ 1.38
TRIM8-202ENST00000462202 GRM5P41594 1212 aa23.7■■□□□ 1.38
TRIM8-202ENST00000462202 DSC1Q08554 894 aa23.7■■□□□ 1.38
TRIM8-202ENST00000462202 LLGL2Q6P1M3 1020 aa23.7■■□□□ 1.38
TRIM8-202ENST00000462202 ZPBP2Q6X784 338 aa23.7■■□□□ 1.38
TRIM8-202ENST00000462202 EFHBQ8N7U6 833 aa23.7■■□□□ 1.38
TRIM8-202ENST00000462202 IQUBQ8NA54 791 aa23.7■■□□□ 1.38
TRIM8-202ENST00000462202 ADAMTS19Q8TE59 1207 aa23.7■■□□□ 1.38
TRIM8-202ENST00000462202 SPATA32Q96LK8 384 aa23.7■■□□□ 1.38
TRIM8-202ENST00000462202 ACAP3Q96P50 834 aa23.7■■□□□ 1.38
TRIM8-202ENST00000462202 CXCL16Q9H2A7 254 aa23.7■■□□□ 1.38
TRIM8-202ENST00000462202 CACNG4Q9UBN1 327 aa23.7■■□□□ 1.38
TRIM8-202ENST00000462202 F8W810 466 aa23.69■■□□□ 1.38
TRIM8-202ENST00000462202 PTGESO14684 152 aa23.69■■□□□ 1.38
TRIM8-202ENST00000462202 GAP43P17677 238 aa23.69■■□□□ 1.38
TRIM8-202ENST00000462202 ADAM15Q13444 863 aa23.69■■□□□ 1.38
TRIM8-202ENST00000462202 TUSC3Q13454 348 aa23.69■■□□□ 1.38
TRIM8-202ENST00000462202 DUSP6Q16828 381 aa23.69■■□□□ 1.38
TRIM8-202ENST00000462202 LEXMQ3ZCV2 418 aa23.69■■□□□ 1.38
TRIM8-202ENST00000462202 SEZ6Q53EL9 994 aa23.69■■□□□ 1.38
TRIM8-202ENST00000462202 AXDND1Q5T1B0 1012 aaPredicted RBP23.69■■□□□ 1.38
TRIM8-202ENST00000462202 MRPL43Q8N983 215 aaKnown RBP23.69■■□□□ 1.38
TRIM8-202ENST00000462202 CDCA3Q99618 268 aaPredicted RBP23.69■■□□□ 1.38
TRIM8-202ENST00000462202 ZBP1Q9H171 429 aa23.69■■□□□ 1.38
TRIM8-202ENST00000462202 MRPL44Q9H9J2 332 aaKnown RBP23.69■■□□□ 1.38
TRIM8-202ENST00000462202 MARCH5Q9NX47 278 aa23.69■■□□□ 1.38
TRIM8-202ENST00000462202 RCOR1Q9UKL0 485 aa23.69■■□□□ 1.38
TRIM8-202ENST00000462202 MYH11P35749 1972 aa23.69■■□□□ 1.38
TRIM8-202ENST00000462202 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.68■■□□□ 1.38
TRIM8-202ENST00000462202 C2orf71A6NGG8 1288 aa23.68■■□□□ 1.38
TRIM8-202ENST00000462202 C2CD2LO14523 706 aa23.68■■□□□ 1.38
TRIM8-202ENST00000462202 POLR2DO15514 142 aaKnown RBP23.68■■□□□ 1.38
TRIM8-202ENST00000462202 TBX10O75333 385 aa23.68■■□□□ 1.38
TRIM8-202ENST00000462202 TADA2AO75478 443 aa23.68■■□□□ 1.38
TRIM8-202ENST00000462202 SRGAP2BP0DMP2 458 aa23.68■■□□□ 1.38
TRIM8-202ENST00000462202 CTSAP10619 480 aa23.68■■□□□ 1.38
TRIM8-202ENST00000462202 BMP1P13497 986 aa23.68■■□□□ 1.38
TRIM8-202ENST00000462202 SCP2P22307 547 aa23.68■■□□□ 1.38
TRIM8-202ENST00000462202 PROZP22891 400 aa23.68■■□□□ 1.38
TRIM8-202ENST00000462202 DLX2Q07687 328 aaPredicted RBP23.68■■□□□ 1.38
TRIM8-202ENST00000462202 CTC1Q2NKJ3 1217 aa23.68■■□□□ 1.38
TRIM8-202ENST00000462202 ZC2HC1CQ53FD0 456 aaPredicted RBP23.68■■□□□ 1.38
TRIM8-202ENST00000462202 HERC4Q5GLZ8 1057 aaPredicted RBP23.68■■□□□ 1.38
TRIM8-202ENST00000462202 PTCRAQ6ISU1 281 aaPredicted RBP23.68■■□□□ 1.38
TRIM8-202ENST00000462202 VN1R3Q9BXE9 311 aa23.68■■□□□ 1.38
TRIM8-202ENST00000462202 LRRC27Q9C0I9 530 aa23.68■■□□□ 1.38
TRIM8-202ENST00000462202 STK39Q9UEW8 545 aa23.68■■□□□ 1.38
TRIM8-202ENST00000462202 BARX2Q9UMQ3 279 aaPredicted RBP23.68■■□□□ 1.38
TRIM8-202ENST00000462202 ATG2AQ2TAZ0 1938 aa23.67■■□□□ 1.38
TRIM8-202ENST00000462202 URODP06132 367 aa23.67■■□□□ 1.38
TRIM8-202ENST00000462202 ABCD1P33897 745 aa23.67■■□□□ 1.38
TRIM8-202ENST00000462202 LTBRP36941 435 aa23.67■■□□□ 1.38
TRIM8-202ENST00000462202 RBM10P98175 930 aaKnown RBP23.67■■□□□ 1.38
TRIM8-202ENST00000462202 AMPD3Q01432 767 aa23.67■■□□□ 1.38
TRIM8-202ENST00000462202 HSP90AA2PQ14568 343 aaPredicted RBP23.67■■□□□ 1.38
TRIM8-202ENST00000462202 COL19A1Q14993 1142 aa23.67■■□□□ 1.38
TRIM8-202ENST00000462202 KIAA1841Q6NSI8 718 aa23.67■■□□□ 1.38
TRIM8-202ENST00000462202 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.67■■□□□ 1.38
TRIM8-202ENST00000462202 HASPINQ8TF76 798 aa23.67■■□□□ 1.38
TRIM8-202ENST00000462202 LEO1Q8WVC0 666 aaPredicted RBP23.67■■□□□ 1.38
TRIM8-202ENST00000462202 DNAJC19Q96DA6 116 aa23.67■■□□□ 1.38
TRIM8-202ENST00000462202 UHRF1Q96T88 793 aaPredicted RBP23.67■■□□□ 1.38
TRIM8-202ENST00000462202 TNMDQ9H2S6 317 aa23.67■■□□□ 1.38
TRIM8-202ENST00000462202 CUEDC2Q9H467 287 aa23.67■■□□□ 1.38
TRIM8-202ENST00000462202 PANK4Q9NVE7 773 aa23.67■■□□□ 1.38
TRIM8-202ENST00000462202 BRWD1Q9NSI6 2320 aa23.67■■□□□ 1.38
TRIM8-202ENST00000462202 FSD2A1L4K1 749 aa23.66■■□□□ 1.38
TRIM8-202ENST00000462202 ABLIM1O14639 778 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms