RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 SLC11A1P49279 550 aa17.11■□□□□ 0.33
SF3A3-203ENST00000461869 RAB27AP51159 221 aa17.11■□□□□ 0.33
SF3A3-203ENST00000461869 PTPN14Q15678 1187 aa17.11■□□□□ 0.33
SF3A3-203ENST00000461869 HYIQ5T013 277 aa17.11■□□□□ 0.33
SF3A3-203ENST00000461869 NCAPH2Q6IBW4 605 aa17.11■□□□□ 0.33
SF3A3-203ENST00000461869 CATSPER4Q7RTX7 472 aa17.11■□□□□ 0.33
SF3A3-203ENST00000461869 GPR149Q86SP6 731 aa17.11■□□□□ 0.33
SF3A3-203ENST00000461869 NLRP4Q96MN2 994 aa17.11■□□□□ 0.33
SF3A3-203ENST00000461869 MMTAG2Q9BU76 263 aaKnown RBP17.11■□□□□ 0.33
SF3A3-203ENST00000461869 PANK2Q9BZ23 570 aa17.11■□□□□ 0.33
SF3A3-203ENST00000461869 KIAA1468Q9P260 1216 aa17.11■□□□□ 0.33
SF3A3-203ENST00000461869 MYO10Q9HD67 2058 aa17.1■□□□□ 0.33
SF3A3-203ENST00000461869 ZNF623O75123 536 aa17.1■□□□□ 0.33
SF3A3-203ENST00000461869 CAVIN2O95810 425 aa17.1■□□□□ 0.33
SF3A3-203ENST00000461869 KLRC2P26717 231 aa17.1■□□□□ 0.33
SF3A3-203ENST00000461869 FOXK2Q01167 660 aa17.1■□□□□ 0.33
SF3A3-203ENST00000461869 AMPD3Q01432 767 aa17.1■□□□□ 0.33
SF3A3-203ENST00000461869 TDGQ13569 410 aa17.1■□□□□ 0.33
SF3A3-203ENST00000461869 CCDC149Q6ZUS6 474 aa17.1■□□□□ 0.33
SF3A3-203ENST00000461869 OTOP3Q7RTS5 596 aa17.1■□□□□ 0.33
SF3A3-203ENST00000461869 FRMD5Q7Z6J6 570 aa17.1■□□□□ 0.33
SF3A3-203ENST00000461869 ZNF280BQ86YH2 543 aa17.1■□□□□ 0.33
SF3A3-203ENST00000461869 KSR1Q8IVT5 923 aa17.1■□□□□ 0.33
SF3A3-203ENST00000461869 URGCPQ8TCY9 931 aa17.1■□□□□ 0.33
SF3A3-203ENST00000461869 PGBD4Q96DM1 585 aa17.1■□□□□ 0.33
SF3A3-203ENST00000461869 KLHL5Q96PQ7 755 aa17.1■□□□□ 0.33
SF3A3-203ENST00000461869 VN1R3Q9BXE9 311 aa17.1■□□□□ 0.33
SF3A3-203ENST00000461869 EMILIN2Q9BXX0 1053 aa17.1■□□□□ 0.33
SF3A3-203ENST00000461869 LRRC27Q9C0I9 530 aa17.1■□□□□ 0.33
SF3A3-203ENST00000461869 GOLGA6L3A6NEY3 463 aa17.09■□□□□ 0.33
SF3A3-203ENST00000461869 MAFO75444 373 aaPredicted RBP17.09■□□□□ 0.33
SF3A3-203ENST00000461869 SSBP05455 408 aaKnown RBP eCLIP17.09■□□□□ 0.33
SF3A3-203ENST00000461869 RPA1P27694 616 aa17.09■□□□□ 0.33
SF3A3-203ENST00000461869 CLCN4P51793 760 aa17.09■□□□□ 0.33
SF3A3-203ENST00000461869 TYRO3Q06418 890 aa17.09■□□□□ 0.33
SF3A3-203ENST00000461869 STX1AQ16623 288 aa17.09■□□□□ 0.33
SF3A3-203ENST00000461869 TMEM119Q4V9L6 283 aa17.09■□□□□ 0.33
SF3A3-203ENST00000461869 CWF19L1Q69YN2 538 aaKnown RBP17.09■□□□□ 0.33
SF3A3-203ENST00000461869 NKD2Q969F2 451 aaPredicted RBP17.09■□□□□ 0.33
SF3A3-203ENST00000461869 JPH2Q9BR39 696 aaPredicted RBP17.09■□□□□ 0.33
SF3A3-203ENST00000461869 FUCA2Q9BTY2 467 aa17.09■□□□□ 0.33
SF3A3-203ENST00000461869 POLR3CQ9BUI4 534 aaPredicted RBP17.09■□□□□ 0.33
SF3A3-203ENST00000461869 TUFT1Q9NNX1 390 aa17.09■□□□□ 0.33
SF3A3-203ENST00000461869 ANO10Q9NW15 660 aa17.09■□□□□ 0.33
SF3A3-203ENST00000461869 STK39Q9UEW8 545 aa17.09■□□□□ 0.33
SF3A3-203ENST00000461869 PCDHB2Q9Y5E7 798 aa17.09■□□□□ 0.33
SF3A3-203ENST00000461869 WDR81Q562E7 1941 aa17.09■□□□□ 0.33
SF3A3-203ENST00000461869 PI15O43692 258 aa17.08■□□□□ 0.32
SF3A3-203ENST00000461869 B4GALT3O60512 393 aa17.08■□□□□ 0.32
SF3A3-203ENST00000461869 DDHD2O94830 711 aa17.08■□□□□ 0.32
SF3A3-203ENST00000461869 ALDH2P05091 517 aa17.08■□□□□ 0.32
SF3A3-203ENST00000461869 CNPP09543 421 aaKnown RBP17.08■□□□□ 0.32
SF3A3-203ENST00000461869 NPR3P17342 541 aa17.08■□□□□ 0.32
SF3A3-203ENST00000461869 B3GNT9Q6UX72 402 aa17.08■□□□□ 0.32
SF3A3-203ENST00000461869 AGMOQ6ZNB7 445 aa17.08■□□□□ 0.32
SF3A3-203ENST00000461869 ANO5Q75V66 913 aa17.08■□□□□ 0.32
SF3A3-203ENST00000461869 TRIML1Q8N9V2 468 aa17.08■□□□□ 0.32
SF3A3-203ENST00000461869 SMARCE1Q969G3 411 aa17.08■□□□□ 0.32
SF3A3-203ENST00000461869 PAGE5Q96GU1 130 aa17.08■□□□□ 0.32
SF3A3-203ENST00000461869 FAM193BQ96PV7 902 aaPredicted RBP17.08■□□□□ 0.32
SF3A3-203ENST00000461869 KCNK12Q9HB15 430 aa17.08■□□□□ 0.32
SF3A3-203ENST00000461869 FBXL21Q9UKT6 434 aa17.08■□□□□ 0.32
SF3A3-203ENST00000461869 FAN1Q9Y2M0 1017 aa17.08■□□□□ 0.32
SF3A3-203ENST00000461869 AOC1P19801 751 aa17.07■□□□□ 0.32
SF3A3-203ENST00000461869 PSMC5P62195 406 aa17.07■□□□□ 0.32
SF3A3-203ENST00000461869 PNOCQ13519 176 aa17.07■□□□□ 0.32
SF3A3-203ENST00000461869 EPHA7Q15375 998 aa17.07■□□□□ 0.32
SF3A3-203ENST00000461869 NT5DC1Q5TFE4 455 aa17.07■□□□□ 0.32
SF3A3-203ENST00000461869 PLA2G4FQ68DD2 849 aa17.07■□□□□ 0.32
SF3A3-203ENST00000461869 C15orf39Q6ZRI6 1047 aa17.07■□□□□ 0.32
SF3A3-203ENST00000461869 LARP4BQ92615 738 aaKnown RBP17.07■□□□□ 0.32
SF3A3-203ENST00000461869 PNMA5Q96PV4 448 aa17.07■□□□□ 0.32
SF3A3-203ENST00000461869 EIF2AK1Q9BQI3 630 aaKnown RBP17.07■□□□□ 0.32
SF3A3-203ENST00000461869 IFT122Q9HBG6 1241 aa17.07■□□□□ 0.32
SF3A3-203ENST00000461869 MRPL17Q9NRX2 175 aaKnown RBP17.07■□□□□ 0.32
SF3A3-203ENST00000461869 AGPAT5Q9NUQ2 364 aa17.07■□□□□ 0.32
SF3A3-203ENST00000461869 KBTBD4Q9NVX7 518 aa17.07■□□□□ 0.32
SF3A3-203ENST00000461869 RMND1Q9NWS8 449 aa17.07■□□□□ 0.32
SF3A3-203ENST00000461869 KANSL3Q9P2N6 904 aa17.07■□□□□ 0.32
SF3A3-203ENST00000461869 DUSP12Q9UNI6 340 aa17.07■□□□□ 0.32
SF3A3-203ENST00000461869 LILRB3O75022 631 aa17.06■□□□□ 0.32
SF3A3-203ENST00000461869 AFMP43652 599 aa17.06■□□□□ 0.32
SF3A3-203ENST00000461869 AFF1P51825 1210 aaKnown RBP17.06■□□□□ 0.32
SF3A3-203ENST00000461869 SV2BQ7L1I2 683 aa17.06■□□□□ 0.32
SF3A3-203ENST00000461869 MRPL10Q7Z7H8 261 aaKnown RBP17.06■□□□□ 0.32
SF3A3-203ENST00000461869 CCDC105Q8IYK2 499 aa17.06■□□□□ 0.32
SF3A3-203ENST00000461869 ADSSL1Q8N142 457 aa17.06■□□□□ 0.32
SF3A3-203ENST00000461869 SIX5Q8N196 739 aa17.06■□□□□ 0.32
SF3A3-203ENST00000461869 RAD54LQ92698 747 aa17.06■□□□□ 0.32
SF3A3-203ENST00000461869 CCDC47Q96A33 483 aaKnown RBP17.06■□□□□ 0.32
SF3A3-203ENST00000461869 GSDMAQ96QA5 445 aa17.06■□□□□ 0.32
SF3A3-203ENST00000461869 RTP3Q9BQQ7 232 aa17.06■□□□□ 0.32
SF3A3-203ENST00000461869 TMEM175Q9BSA9 504 aa17.06■□□□□ 0.32
SF3A3-203ENST00000461869 GTPBP4Q9BZE4 634 aaKnown RBP17.06■□□□□ 0.32
SF3A3-203ENST00000461869 RSAD1Q9HA92 442 aa17.06■□□□□ 0.32
SF3A3-203ENST00000461869 COL4A3BPQ9Y5P4 624 aa17.06■□□□□ 0.32
SF3A3-203ENST00000461869 CNTNAP2Q9UHC6 1331 aa17.05■□□□□ 0.32
SF3A3-203ENST00000461869 C2CD2LO14523 706 aa17.05■□□□□ 0.32
SF3A3-203ENST00000461869 NRP1O14786 923 aa17.05■□□□□ 0.32
SF3A3-203ENST00000461869 POMCP01189 267 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms