RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 SP7Q8TDD2 431 aaPredicted RBP12.31□□□□□ -0.44
SSBP1-202ENST00000461433 HELQQ8TDG4 1101 aa12.31□□□□□ -0.44
SSBP1-202ENST00000461433 POMGNT1Q8WZA1 660 aa12.31□□□□□ -0.44
SSBP1-202ENST00000461433 RAD9AQ99638 391 aa12.31□□□□□ -0.44
SSBP1-202ENST00000461433 PCIF1Q9H4Z3 704 aa12.31□□□□□ -0.44
SSBP1-202ENST00000461433 RNF216Q9NWF9 866 aaPredicted RBP12.31□□□□□ -0.44
SSBP1-202ENST00000461433 MIOSQ9NXC5 875 aa12.31□□□□□ -0.44
SSBP1-202ENST00000461433 CPSF3Q9UKF6 684 aaKnown RBP12.31□□□□□ -0.44
SSBP1-202ENST00000461433 AGO2Q9UKV8 859 aaKnown RBP12.31□□□□□ -0.44
SSBP1-202ENST00000461433 GIT1Q9Y2X7 761 aa12.31□□□□□ -0.44
SSBP1-202ENST00000461433 TDRD15B5MCY1 1934 aaKnown RBP12.31□□□□□ -0.44
SSBP1-202ENST00000461433 RALGAPA2Q2PPJ7 1873 aa12.3□□□□□ -0.44
SSBP1-202ENST00000461433 LCHNA4D1U4 455 aa12.3□□□□□ -0.44
SSBP1-202ENST00000461433 ARL5CA6NH57 179 aa12.3□□□□□ -0.44
SSBP1-202ENST00000461433 ADRB2P07550 413 aa12.3□□□□□ -0.44
SSBP1-202ENST00000461433 MATR3P43243 847 aaKnown RBP eCLIP12.3□□□□□ -0.44
SSBP1-202ENST00000461433 ACOT2P49753 483 aa12.3□□□□□ -0.44
SSBP1-202ENST00000461433 SLC10A6Q3KNW5 377 aa12.3□□□□□ -0.44
SSBP1-202ENST00000461433 XKR4Q5GH76 650 aa12.3□□□□□ -0.44
SSBP1-202ENST00000461433 ARMCX5Q6P1M9 558 aa12.3□□□□□ -0.44
SSBP1-202ENST00000461433 LRRC55Q6ZSA7 311 aa12.3□□□□□ -0.44
SSBP1-202ENST00000461433 APBB1IPQ7Z5R6 666 aaPredicted RBP12.3□□□□□ -0.44
SSBP1-202ENST00000461433 FBXL18Q96ME1 805 aa12.3□□□□□ -0.44
SSBP1-202ENST00000461433 ZFP42Q96MM3 310 aa12.3□□□□□ -0.44
SSBP1-202ENST00000461433 GAD1Q99259 594 aa12.3□□□□□ -0.44
SSBP1-202ENST00000461433 PBX4Q9BYU1 374 aa12.3□□□□□ -0.44
SSBP1-202ENST00000461433 RSAD1Q9HA92 442 aa12.3□□□□□ -0.44
SSBP1-202ENST00000461433 DMAC2Q9NW81 257 aa12.3□□□□□ -0.44
SSBP1-202ENST00000461433 HSPBP1Q9NZL4 362 aa12.3□□□□□ -0.44
SSBP1-202ENST00000461433 KLK14Q9P0G3 267 aa12.3□□□□□ -0.44
SSBP1-202ENST00000461433 CGNQ9P2M7 1197 aaKnown RBP12.3□□□□□ -0.44
SSBP1-202ENST00000461433 PARP2Q9UGN5 583 aa12.3□□□□□ -0.44
SSBP1-202ENST00000461433 YBX2Q9Y2T7 364 aaKnown RBP12.3□□□□□ -0.44
SSBP1-202ENST00000461433 INSL6Q9Y581 213 aa12.3□□□□□ -0.44
SSBP1-202ENST00000461433 KIAA1671Q9BY89 1806 aa12.3□□□□□ -0.44
SSBP1-202ENST00000461433 PTGESO14684 152 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 TLL1O43897 1013 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 ARHGEF15O94989 841 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 CLTAP09496 248 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 LINC00271P0C7V0 271 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 MLH1P40692 756 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 NLRP12P59046 1061 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 ENOX2Q16206 610 aaKnown RBP12.29□□□□□ -0.44
SSBP1-202ENST00000461433 NFIL3Q16649 462 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 SKOR2Q2VWA4 1001 aaPredicted RBP12.29□□□□□ -0.44
SSBP1-202ENST00000461433 DPCR1Q3MIW9 517 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 ANKRD40Q6AI12 368 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 HS2ST1Q7LGA3 356 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 SLC9A9Q8IVB4 645 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 HACE1Q8IYU2 909 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 SAAL1Q96ER3 474 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 DHTKD1Q96HY7 919 aaPredicted RBP12.29□□□□□ -0.44
SSBP1-202ENST00000461433 ACAP3Q96P50 834 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 MED15Q96RN5 788 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 YME1L1Q96TA2 773 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 ZBED2Q9BTP6 218 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 CCDC94Q9BW85 323 aaPredicted RBP12.29□□□□□ -0.44
SSBP1-202ENST00000461433 TMEM117Q9H0C3 514 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 UBN1Q9NPG3 1134 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 PLAGL2Q9UPG8 496 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 PCDHA11Q9Y5I1 949 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 TTC26A0AVF1 554 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 GOLGA8IPA6NC78 632 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 TRIM49BA6NDI0 452 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 GOLGA8JA6NMD2 632 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 TBKBP1A7MCY6 615 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 HOXA2O43364 376 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 EXTL3O43909 919 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 NR3C1P04150 777 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 CXCL8P10145 99 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 CCNE1P24864 410 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 WNT7BP56706 349 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 SMAD3P84022 425 aaKnown RBP12.29□□□□□ -0.44
SSBP1-202ENST00000461433 KYAT1Q16773 422 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 PAN2Q504Q3 1202 aaKnown RBP12.29□□□□□ -0.44
SSBP1-202ENST00000461433 NOMO2Q5JPE7 1267 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 GLB1LQ6UWU2 654 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 CMTR2Q8IYT2 770 aaKnown RBP12.29□□□□□ -0.44
SSBP1-202ENST00000461433 GPD1LQ8N335 351 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 MLKLQ8NB16 471 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 GOLGA5Q8TBA6 731 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 P2RX5Q93086 422 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 SNX27Q96L92 541 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 FAM213AQ9BRX8 229 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 HCSTQ9UBK5 93 aa12.29□□□□□ -0.44
SSBP1-202ENST00000461433 PSMA7O14818 248 aa12.28□□□□□ -0.44
SSBP1-202ENST00000461433 KIAA0391O15091 583 aaKnown RBP12.28□□□□□ -0.44
SSBP1-202ENST00000461433 CALUO43852 315 aaPredicted RBP12.28□□□□□ -0.44
SSBP1-202ENST00000461433 B4GALT3O60512 393 aa12.28□□□□□ -0.44
SSBP1-202ENST00000461433 LDHAP00338 332 aaKnown RBP12.28□□□□□ -0.44
SSBP1-202ENST00000461433 PPP1R2P41236 205 aa12.28□□□□□ -0.44
SSBP1-202ENST00000461433 SCNN1GP51170 649 aa12.28□□□□□ -0.44
SSBP1-202ENST00000461433 CYP2J2P51589 502 aa12.28□□□□□ -0.44
SSBP1-202ENST00000461433 POU5F1Q01860 360 aaKnown RBP12.28□□□□□ -0.44
SSBP1-202ENST00000461433 MYBPC2Q14324 1141 aa12.28□□□□□ -0.44
SSBP1-202ENST00000461433 NAB2Q15742 525 aa12.28□□□□□ -0.44
SSBP1-202ENST00000461433 EDRF1Q3B7T1 1238 aa12.28□□□□□ -0.44
SSBP1-202ENST00000461433 KLHL10Q6JEL2 608 aa12.28□□□□□ -0.44
SSBP1-202ENST00000461433 TTI2Q6NXR4 508 aa12.28□□□□□ -0.44
SSBP1-202ENST00000461433 CBWD2Q8IUF1 395 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms