RNA–Protein interactions for RNA: ENST00000460903.2

YIPF3-206, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 605 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-206ENST00000460903 ECI2O75521 394 aa16.99■□□□□ 0.31
YIPF3-206ENST00000460903 CDC27P30260 824 aa16.99■□□□□ 0.31
YIPF3-206ENST00000460903 HOXA9P31269 272 aa16.99■□□□□ 0.31
YIPF3-206ENST00000460903 CREMQ03060 361 aa16.99■□□□□ 0.31
YIPF3-206ENST00000460903 SIM2Q14190 667 aaPredicted RBP16.99■□□□□ 0.31
YIPF3-206ENST00000460903 PFKFB3Q16875 520 aaPredicted RBP16.99■□□□□ 0.31
YIPF3-206ENST00000460903 LIN9Q5TKA1 542 aa16.99■□□□□ 0.31
YIPF3-206ENST00000460903 B3GNT9Q6UX72 402 aa16.99■□□□□ 0.31
YIPF3-206ENST00000460903 SRGAP1Q7Z6B7 1085 aa16.99■□□□□ 0.31
YIPF3-206ENST00000460903 CNNM3Q8NE01 707 aa16.99■□□□□ 0.31
YIPF3-206ENST00000460903 TEKT3Q9BXF9 490 aa16.99■□□□□ 0.31
YIPF3-206ENST00000460903 DSPP15924 2871 aaKnown RBP16.99■□□□□ 0.31
YIPF3-206ENST00000460903 SLC27A2O14975 620 aa16.98■□□□□ 0.31
YIPF3-206ENST00000460903 ADAM12O43184 909 aa16.98■□□□□ 0.31
YIPF3-206ENST00000460903 PSMD10O75832 226 aa16.98■□□□□ 0.31
YIPF3-206ENST00000460903 SRGAP2CP0DJJ0 459 aa16.98■□□□□ 0.31
YIPF3-206ENST00000460903 SATB1Q01826 763 aa16.98■□□□□ 0.31
YIPF3-206ENST00000460903 SYNE3Q6ZMZ3 975 aa16.98■□□□□ 0.31
YIPF3-206ENST00000460903 MIER3Q7Z3K6 550 aa16.98■□□□□ 0.31
YIPF3-206ENST00000460903 ZNF579Q8NAF0 562 aaKnown RBP16.98■□□□□ 0.31
YIPF3-206ENST00000460903 PAAF1Q9BRP4 392 aa16.98■□□□□ 0.31
YIPF3-206ENST00000460903 DNMT3BQ9UBC3 853 aaKnown RBP16.98■□□□□ 0.31
YIPF3-206ENST00000460903 DMXL2Q8TDJ6 3036 aa16.97■□□□□ 0.31
YIPF3-206ENST00000460903 DDX11L8A8MPP1 907 aa16.97■□□□□ 0.31
YIPF3-206ENST00000460903 NRG2O14511 850 aaPredicted RBP16.97■□□□□ 0.31
YIPF3-206ENST00000460903 ZBTB43O43298 467 aa16.97■□□□□ 0.31
YIPF3-206ENST00000460903 NR1I2O75469 434 aa16.97■□□□□ 0.31
YIPF3-206ENST00000460903 GAS6Q14393 721 aa16.97■□□□□ 0.31
YIPF3-206ENST00000460903 SLC5A9Q2M3M2 681 aa16.97■□□□□ 0.31
YIPF3-206ENST00000460903 PABPC1LQ4VXU2 614 aaKnown RBP16.97■□□□□ 0.31
YIPF3-206ENST00000460903 IL31Q6EBC2 164 aa16.97■□□□□ 0.31
YIPF3-206ENST00000460903 TANGO2Q6ICL3 276 aa16.97■□□□□ 0.31
YIPF3-206ENST00000460903 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.97■□□□□ 0.31
YIPF3-206ENST00000460903 RDM1Q8NG50 284 aa16.97■□□□□ 0.31
YIPF3-206ENST00000460903 LNX1Q8TBB1 728 aaPredicted RBP16.97■□□□□ 0.31
YIPF3-206ENST00000460903 SLC7A14Q8TBB6 771 aa16.97■□□□□ 0.31
YIPF3-206ENST00000460903 PRPF31Q8WWY3 499 aaKnown RBP16.97■□□□□ 0.31
YIPF3-206ENST00000460903 DNASE1L2Q92874 299 aa16.97■□□□□ 0.31
YIPF3-206ENST00000460903 MCRS1Q96EZ8 462 aa16.97■□□□□ 0.31
YIPF3-206ENST00000460903 APOL6Q9BWW8 343 aa16.97■□□□□ 0.31
YIPF3-206ENST00000460903 RXFP3Q9NSD7 469 aa16.97■□□□□ 0.31
YIPF3-206ENST00000460903 ZMIZ1Q9ULJ6 1067 aa16.97■□□□□ 0.31
YIPF3-206ENST00000460903 NUP210Q8TEM1 1887 aaPredicted RBP16.97■□□□□ 0.31
YIPF3-206ENST00000460903 C1QTNF9BB2RNN3 333 aa16.96■□□□□ 0.31
YIPF3-206ENST00000460903 CHURC1-FNTBB4DL54 471 aa16.96■□□□□ 0.31
YIPF3-206ENST00000460903 TSPAN1O60635 241 aa16.96■□□□□ 0.31
YIPF3-206ENST00000460903 XYLBO75191 536 aa16.96■□□□□ 0.31
YIPF3-206ENST00000460903 POU2F2P09086 479 aa16.96■□□□□ 0.31
YIPF3-206ENST00000460903 C1QTNF9P0C862 333 aa16.96■□□□□ 0.31
YIPF3-206ENST00000460903 FCARP24071 287 aa16.96■□□□□ 0.31
YIPF3-206ENST00000460903 FNTBP49356 437 aa16.96■□□□□ 0.31
YIPF3-206ENST00000460903 CCR3P51677 355 aa16.96■□□□□ 0.31
YIPF3-206ENST00000460903 LIMK1P53667 647 aa16.96■□□□□ 0.31
YIPF3-206ENST00000460903 NPEPPSP55786 919 aa16.96■□□□□ 0.31
YIPF3-206ENST00000460903 LAMTOR4Q0VGL1 99 aa16.96■□□□□ 0.31
YIPF3-206ENST00000460903 PPP2R5DQ14738 602 aa16.96■□□□□ 0.31
YIPF3-206ENST00000460903 HASPINQ8TF76 798 aa16.96■□□□□ 0.31
YIPF3-206ENST00000460903 PIK3R5Q8WYR1 880 aa16.96■□□□□ 0.31
YIPF3-206ENST00000460903 TMEM143Q96AN5 459 aa16.96■□□□□ 0.31
YIPF3-206ENST00000460903 CPB2Q96IY4 423 aa16.96■□□□□ 0.31
YIPF3-206ENST00000460903 CCDC136Q96JN2 1154 aa16.96■□□□□ 0.31
YIPF3-206ENST00000460903 TCEANC2Q96MN5 208 aa16.96■□□□□ 0.31
YIPF3-206ENST00000460903 IER2Q9BTL4 223 aa16.96■□□□□ 0.31
YIPF3-206ENST00000460903 NXF3Q9H4D5 531 aaKnown RBP16.96■□□□□ 0.31
YIPF3-206ENST00000460903 LMAN1LQ9HAT1 526 aa16.96■□□□□ 0.31
YIPF3-206ENST00000460903 C6orf50Q9HD87 102 aa16.96■□□□□ 0.31
YIPF3-206ENST00000460903 KCNH3Q9ULD8 1083 aa16.96■□□□□ 0.31
YIPF3-206ENST00000460903 SF3B1O75533 1304 aaKnown RBP eCLIP16.96■□□□□ 0.32e-6■■■■■ 113.6
YIPF3-206ENST00000460903 MYO16Q9Y6X6 1858 aa16.95■□□□□ 0.3
YIPF3-206ENST00000460903 GRM2Q14416 872 aa16.95■□□□□ 0.3
YIPF3-206ENST00000460903 SF3A2Q15428 464 aaKnown RBP16.95■□□□□ 0.3
YIPF3-206ENST00000460903 PSMD5Q16401 504 aa16.95■□□□□ 0.3
YIPF3-206ENST00000460903 AXDND1Q5T1B0 1012 aaPredicted RBP16.95■□□□□ 0.3
YIPF3-206ENST00000460903 FAM160A2Q8N612 972 aaPredicted RBP16.95■□□□□ 0.3
YIPF3-206ENST00000460903 ELSPBP1Q96BH3 223 aa16.95■□□□□ 0.3
YIPF3-206ENST00000460903 JPH2Q9BR39 696 aaPredicted RBP16.95■□□□□ 0.3
YIPF3-206ENST00000460903 LSG1Q9H089 658 aaKnown RBP16.95■□□□□ 0.3
YIPF3-206ENST00000460903 DHX33Q9H6R0 707 aaKnown RBP16.95■□□□□ 0.3
YIPF3-206ENST00000460903 BMP2KQ9NSY1 1161 aaPredicted RBP16.95■□□□□ 0.3
YIPF3-206ENST00000460903 GIT1Q9Y2X7 761 aa16.95■□□□□ 0.3
YIPF3-206ENST00000460903 SETXQ7Z333 2677 aaKnown RBP16.95■□□□□ 0.3
YIPF3-206ENST00000460903 GOLGA8AA7E2F4 631 aa16.94■□□□□ 0.3
YIPF3-206ENST00000460903 GOLGA8BA8MQT2 603 aa16.94■□□□□ 0.3
YIPF3-206ENST00000460903 TADA2AO75478 443 aa16.94■□□□□ 0.3
YIPF3-206ENST00000460903 AKAP5P24588 427 aa16.94■□□□□ 0.3
YIPF3-206ENST00000460903 HOXC13P31276 330 aa16.94■□□□□ 0.3
YIPF3-206ENST00000460903 HSP90AA2PQ14568 343 aaPredicted RBP16.94■□□□□ 0.3
YIPF3-206ENST00000460903 NECTIN1Q15223 517 aa16.94■□□□□ 0.3
YIPF3-206ENST00000460903 FAM171A1Q5VUB5 890 aa16.94■□□□□ 0.3
YIPF3-206ENST00000460903 CREB3L3Q68CJ9 461 aa16.94■□□□□ 0.3
YIPF3-206ENST00000460903 RNF149Q8NC42 400 aa16.94■□□□□ 0.3
YIPF3-206ENST00000460903 PSPC1Q8WXF1 523 aaKnown RBP16.94■□□□□ 0.3
YIPF3-206ENST00000460903 TTPALQ9BTX7 342 aa16.94■□□□□ 0.3
YIPF3-206ENST00000460903 MRPS23Q9Y3D9 190 aaKnown RBP16.94■□□□□ 0.3
YIPF3-206ENST00000460903 GCN1Q92616 2671 aaKnown RBP16.93■□□□□ 0.3
YIPF3-206ENST00000460903 KIAA1549LQ6ZVL6 1849 aa16.93■□□□□ 0.3
YIPF3-206ENST00000460903 K7ESF4 209 aa16.93■□□□□ 0.3
YIPF3-206ENST00000460903 MAN2B1O00754 1011 aa16.93■□□□□ 0.3
YIPF3-206ENST00000460903 FOXD2O60548 495 aaPredicted RBP16.93■□□□□ 0.3
YIPF3-206ENST00000460903 ERLIN2O94905 339 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms