RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 HDAC10Q969S8 669 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 NT5C1BQ96P26 610 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 NUP62CLQ9H1M0 184 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 SLC39A2Q9NP94 309 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 DENND2AQ9ULE3 1009 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 PCDHB6Q9Y5E3 794 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 MGEA5O60502 916 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 OPHN1O60890 802 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 FTLP02792 175 aaPredicted RBP3.62□□□□□ -1.83
HPS3-203ENST00000460822 CD53P19397 219 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 IL12RB1P42701 662 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 MAP2K6P52564 334 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 RAB1AP62820 205 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 EFEMP1Q12805 493 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 POLD3Q15054 466 aaPredicted RBP3.62□□□□□ -1.83
HPS3-203ENST00000460822 MUM1L1Q5H9M0 696 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 LRSAM1Q6UWE0 723 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 ARHGEF18Q6ZSZ5 1173 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 GAREM2Q75VX8 874 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 SMAP1Q8IYB5 467 aaPredicted RBP3.62□□□□□ -1.83
HPS3-203ENST00000460822 KLHL36Q8N4N3 616 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 CDYL2Q8N8U2 506 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 CALML6Q8TD86 181 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 RSAD2Q8WXG1 361 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 FATE1Q969F0 183 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 RGMAQ96B86 450 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 RIPOR3Q96MK2 946 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 YTHDC1Q96MU7 727 aaKnown RBP3.62□□□□□ -1.83
HPS3-203ENST00000460822 NOL10Q9BSC4 688 aaKnown RBP3.62□□□□□ -1.83
HPS3-203ENST00000460822 AMNQ9BXJ7 453 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 C22orf23Q9BZE7 217 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 ARMT1Q9H993 441 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 ARFGAP3Q9NP61 516 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 CASS4Q9NQ75 786 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 KMT5AQ9NQR1 393 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 TRMT13Q9NUP7 481 aaKnown RBP3.62□□□□□ -1.83
HPS3-203ENST00000460822 SMPD4Q9NXE4 827 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 GPRC5BQ9NZH0 403 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 HSPBP1Q9NZL4 362 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 SCOCQ9UIL1 159 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 CORO2BQ9UQ03 480 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 PCDHA13Q9Y5I0 950 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 NPEPPSL1A6NEC2 478 aa3.61□□□□□ -1.83
HPS3-203ENST00000460822 RHPN2P1A8MT19 583 aa3.61□□□□□ -1.83
HPS3-203ENST00000460822 LAMTOR5O43504 91 aa3.61□□□□□ -1.83
HPS3-203ENST00000460822 GSPT1P15170 499 aaKnown RBP3.61□□□□□ -1.83
HPS3-203ENST00000460822 TYRP1P17643 537 aa3.61□□□□□ -1.83
HPS3-203ENST00000460822 MCAMP43121 646 aa3.61□□□□□ -1.83
HPS3-203ENST00000460822 MAGEA10P43363 369 aaPredicted RBP3.61□□□□□ -1.83
HPS3-203ENST00000460822 GLRBP48167 497 aa3.61□□□□□ -1.83
HPS3-203ENST00000460822 MLLT6P55198 1093 aaPredicted RBP3.61□□□□□ -1.83
HPS3-203ENST00000460822 PPP3CAQ08209 521 aa3.61□□□□□ -1.83
HPS3-203ENST00000460822 TBC1D10BQ4KMP7 808 aaPredicted RBP3.61□□□□□ -1.83
HPS3-203ENST00000460822 OR2I1PQ8NGU4 316 aa3.61□□□□□ -1.83
HPS3-203ENST00000460822 PLBD2Q8NHP8 589 aa3.61□□□□□ -1.83
HPS3-203ENST00000460822 KIAA1191Q96A73 305 aa3.61□□□□□ -1.83
HPS3-203ENST00000460822 CDK5RAP3Q96JB5 506 aa3.61□□□□□ -1.83
HPS3-203ENST00000460822 ADI1Q9BV57 179 aa3.61□□□□□ -1.83
HPS3-203ENST00000460822 INCENPQ9NQS7 918 aa3.61□□□□□ -1.83
HPS3-203ENST00000460822 ARHGAP20Q9P2F6 1191 aa3.61□□□□□ -1.83
HPS3-203ENST00000460822 RBPJLQ9UBG7 517 aa3.61□□□□□ -1.83
HPS3-203ENST00000460822 CDC23Q9UJX2 597 aa3.61□□□□□ -1.83
HPS3-203ENST00000460822 SYNPO2Q9UMS6 1093 aa3.61□□□□□ -1.83
HPS3-203ENST00000460822 PCDHB1Q9Y5F3 818 aa3.61□□□□□ -1.83
HPS3-203ENST00000460822 ABCB4P21439 1286 aa3.6□□□□□ -1.83
HPS3-203ENST00000460822 TNFSF4P23510 183 aa3.6□□□□□ -1.83
HPS3-203ENST00000460822 IL6STP40189 918 aaPredicted RBP3.6□□□□□ -1.83
HPS3-203ENST00000460822 WASP42768 502 aa3.6□□□□□ -1.83
HPS3-203ENST00000460822 RENBPP51606 427 aa3.6□□□□□ -1.83
HPS3-203ENST00000460822 CASP5P51878 434 aa3.6□□□□□ -1.83
HPS3-203ENST00000460822 BTKQ06187 659 aa3.6□□□□□ -1.83
HPS3-203ENST00000460822 NFATC3Q12968 1075 aa3.6□□□□□ -1.83
HPS3-203ENST00000460822 ZXDCQ2QGD7 858 aaPredicted RBP3.6□□□□□ -1.83
HPS3-203ENST00000460822 APOA5Q6Q788 366 aa3.6□□□□□ -1.83
HPS3-203ENST00000460822 BTNL9Q6UXG8 535 aa3.6□□□□□ -1.83
HPS3-203ENST00000460822 GPR155Q7Z3F1 870 aa3.6□□□□□ -1.83
HPS3-203ENST00000460822 KBTBD2Q8IY47 623 aa3.6□□□□□ -1.83
HPS3-203ENST00000460822 SAMD11Q96NU1 681 aa3.6□□□□□ -1.83
HPS3-203ENST00000460822 FDXACB1Q9BRP7 624 aaPredicted RBP3.6□□□□□ -1.83
HPS3-203ENST00000460822 SELENOOQ9BVL4 669 aa3.6□□□□□ -1.83
HPS3-203ENST00000460822 WDR12Q9GZL7 423 aaKnown RBP3.6□□□□□ -1.83
HPS3-203ENST00000460822 PITHD1Q9GZP4 211 aaPredicted RBP3.6□□□□□ -1.83
HPS3-203ENST00000460822 VPS11Q9H270 941 aa3.6□□□□□ -1.83
HPS3-203ENST00000460822 GREM2Q9H772 168 aa3.6□□□□□ -1.83
HPS3-203ENST00000460822 ZMAT3Q9HA38 289 aaKnown RBP3.6□□□□□ -1.83
HPS3-203ENST00000460822 CERS4Q9HA82 394 aa3.6□□□□□ -1.83
HPS3-203ENST00000460822 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.6□□□□□ -1.83
HPS3-203ENST00000460822 STAP2Q9UGK3 403 aa3.6□□□□□ -1.83
HPS3-203ENST00000460822 TPCN1Q9ULQ1 816 aa3.6□□□□□ -1.83
HPS3-203ENST00000460822 LZTS1Q9Y250 596 aa3.6□□□□□ -1.83
HPS3-203ENST00000460822 LRCH1Q9Y2L9 728 aa3.6□□□□□ -1.83
HPS3-203ENST00000460822 PCDHGB3Q9Y5G1 929 aa3.6□□□□□ -1.83
HPS3-203ENST00000460822 SNX13Q9Y5W8 968 aa3.6□□□□□ -1.83
HPS3-203ENST00000460822 CFAP20Q9Y6A4 193 aaKnown RBP3.6□□□□□ -1.83
HPS3-203ENST00000460822 A0A088AWK7 358 aa3.6□□□□□ -1.83
HPS3-203ENST00000460822 LRRC14BA6NHZ5 514 aa3.6□□□□□ -1.83
HPS3-203ENST00000460822 NCK2O43639 380 aa3.6□□□□□ -1.83
HPS3-203ENST00000460822 B4GALT4O60513 344 aa3.6□□□□□ -1.83
HPS3-203ENST00000460822 CHGBP05060 677 aa3.6□□□□□ -1.83
HPS3-203ENST00000460822 MYF5P13349 255 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms