RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 CDC45O75419 566 aa3.79□□□□□ -1.8
SYPL1-203ENST00000460770 FDXRP22570 491 aa3.79□□□□□ -1.8
SYPL1-203ENST00000460770 CTSSP25774 331 aa3.79□□□□□ -1.8
SYPL1-203ENST00000460770 CLRN1P58418 232 aa3.79□□□□□ -1.8
SYPL1-203ENST00000460770 RESTQ13127 1097 aa3.79□□□□□ -1.8
SYPL1-203ENST00000460770 PDCD4Q53EL6 469 aaKnown RBP3.79□□□□□ -1.8
SYPL1-203ENST00000460770 FAM47AQ5JRC9 791 aa3.79□□□□□ -1.8
SYPL1-203ENST00000460770 ATXN7L2Q5T6C5 722 aaPredicted RBP3.79□□□□□ -1.8
SYPL1-203ENST00000460770 BROXQ5VW32 411 aa3.79□□□□□ -1.8
SYPL1-203ENST00000460770 FBXO42Q6P3S6 717 aa3.79□□□□□ -1.8
SYPL1-203ENST00000460770 DRC7Q8IY82 874 aa3.79□□□□□ -1.8
SYPL1-203ENST00000460770 MDM1Q8TC05 714 aa3.79□□□□□ -1.8
SYPL1-203ENST00000460770 DUSP26Q9BV47 211 aa3.79□□□□□ -1.8
SYPL1-203ENST00000460770 SPATA5L1Q9BVQ7 753 aa3.79□□□□□ -1.8
SYPL1-203ENST00000460770 KCTD10Q9H3F6 313 aa3.79□□□□□ -1.8
SYPL1-203ENST00000460770 WDR26Q9H7D7 661 aa3.79□□□□□ -1.8
SYPL1-203ENST00000460770 FANCLQ9NW38 375 aa3.79□□□□□ -1.8
SYPL1-203ENST00000460770 MOCS1Q9NZB8 636 aa3.79□□□□□ -1.8
SYPL1-203ENST00000460770 ZBTB21Q9ULJ3 1066 aa3.79□□□□□ -1.8
SYPL1-203ENST00000460770 EPN1Q9Y6I3 576 aaPredicted RBP3.79□□□□□ -1.8
SYPL1-203ENST00000460770 ZMYM3Q14202 1370 aa3.78□□□□□ -1.8
SYPL1-203ENST00000460770 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.78□□□□□ -1.8
SYPL1-203ENST00000460770 UNC119BA6NIH7 251 aa3.78□□□□□ -1.8
SYPL1-203ENST00000460770 ULK1O75385 1050 aa3.78□□□□□ -1.8
SYPL1-203ENST00000460770 CFIP05156 583 aa3.78□□□□□ -1.8
SYPL1-203ENST00000460770 ITGAMP11215 1152 aa3.78□□□□□ -1.8
SYPL1-203ENST00000460770 MTHFD2P13995 350 aa3.78□□□□□ -1.8
SYPL1-203ENST00000460770 PTPN7P35236 360 aa3.78□□□□□ -1.8
SYPL1-203ENST00000460770 SESN3P58005 492 aa3.78□□□□□ -1.8
SYPL1-203ENST00000460770 PCBP1Q15365 356 aaKnown RBP eCLIP3.78□□□□□ -1.8
SYPL1-203ENST00000460770 UGT8Q16880 541 aa3.78□□□□□ -1.8
SYPL1-203ENST00000460770 ATP13A4Q4VNC1 1196 aa3.78□□□□□ -1.8
SYPL1-203ENST00000460770 FAM102AQ5T9C2 384 aaPredicted RBP3.78□□□□□ -1.8
SYPL1-203ENST00000460770 LRCH2Q5VUJ6 765 aa3.78□□□□□ -1.8
SYPL1-203ENST00000460770 SYT12Q8IV01 421 aa3.78□□□□□ -1.8
SYPL1-203ENST00000460770 RHOT2Q8IXI1 618 aa3.78□□□□□ -1.8
SYPL1-203ENST00000460770 DHX37Q8IY37 1157 aaKnown RBP3.78□□□□□ -1.8
SYPL1-203ENST00000460770 FAM43AQ8N2R8 423 aa3.78□□□□□ -1.8
SYPL1-203ENST00000460770 RNF169Q8NCN4 708 aa3.78□□□□□ -1.8
SYPL1-203ENST00000460770 USP7Q93009 1102 aa3.78□□□□□ -1.8
SYPL1-203ENST00000460770 RNPC3Q96LT9 517 aaKnown RBP3.78□□□□□ -1.8
SYPL1-203ENST00000460770 TARS2Q9BW92 718 aaKnown RBP3.78□□□□□ -1.8
SYPL1-203ENST00000460770 RNPEPQ9H4A4 650 aa3.78□□□□□ -1.8
SYPL1-203ENST00000460770 KANSL2Q9H9L4 492 aa3.78□□□□□ -1.8
SYPL1-203ENST00000460770 EMC7Q9NPA0 242 aa3.78□□□□□ -1.8
SYPL1-203ENST00000460770 TBCCD1Q9NVR7 557 aa3.78□□□□□ -1.8
SYPL1-203ENST00000460770 DKK2Q9UBU2 259 aa3.78□□□□□ -1.8
SYPL1-203ENST00000460770 TLK1Q9UKI8 766 aa3.78□□□□□ -1.8
SYPL1-203ENST00000460770 TMPRSS11EQ9UL52 423 aa3.78□□□□□ -1.8
SYPL1-203ENST00000460770 DMTF1Q9Y222 760 aa3.78□□□□□ -1.8
SYPL1-203ENST00000460770 MAST3O60307 1309 aa3.77□□□□□ -1.81
SYPL1-203ENST00000460770 MARCH11A6NNE9 402 aa3.77□□□□□ -1.81
SYPL1-203ENST00000460770 ZNF185O15231 689 aa3.77□□□□□ -1.81
SYPL1-203ENST00000460770 TEX33O43247 280 aa3.77□□□□□ -1.81
SYPL1-203ENST00000460770 AKR1B10O60218 316 aa3.77□□□□□ -1.81
SYPL1-203ENST00000460770 TMEM127O75204 238 aa3.77□□□□□ -1.81
SYPL1-203ENST00000460770 SPDEFO95238 335 aa3.77□□□□□ -1.81
SYPL1-203ENST00000460770 EGR2P11161 476 aaPredicted RBP3.77□□□□□ -1.81
SYPL1-203ENST00000460770 IL2RBP14784 551 aa3.77□□□□□ -1.81
SYPL1-203ENST00000460770 TYRP1P17643 537 aa3.77□□□□□ -1.81
SYPL1-203ENST00000460770 ECHS1P30084 290 aa3.77□□□□□ -1.81
SYPL1-203ENST00000460770 ADCYAP1R1P41586 468 aa3.77□□□□□ -1.81
SYPL1-203ENST00000460770 IL12RB1P42701 662 aa3.77□□□□□ -1.81
SYPL1-203ENST00000460770 LGALS4P56470 323 aa3.77□□□□□ -1.81
SYPL1-203ENST00000460770 TP53BP2Q13625 1128 aa3.77□□□□□ -1.81
SYPL1-203ENST00000460770 TRIM25Q14258 630 aaKnown RBP3.77□□□□□ -1.81
SYPL1-203ENST00000460770 FSCN1Q16658 493 aaKnown RBP3.77□□□□□ -1.81
SYPL1-203ENST00000460770 C21orf62-AS1Q17RA5 79 aa3.77□□□□□ -1.81
SYPL1-203ENST00000460770 MST1LQ2TV78 715 aa3.77□□□□□ -1.81
SYPL1-203ENST00000460770 PITRM1Q5JRX3 1037 aa3.77□□□□□ -1.81
SYPL1-203ENST00000460770 PRAMEF14Q5SWL7 426 aa3.77□□□□□ -1.81
SYPL1-203ENST00000460770 AGAP9Q5VTM2 703 aa3.77□□□□□ -1.81
SYPL1-203ENST00000460770 FOXR2Q6PJQ5 311 aa3.77□□□□□ -1.81
SYPL1-203ENST00000460770 BTNL9Q6UXG8 535 aa3.77□□□□□ -1.81
SYPL1-203ENST00000460770 ABHD15Q6UXT9 468 aa3.77□□□□□ -1.81
SYPL1-203ENST00000460770 MAPKAPK5Q8IW41 473 aa3.77□□□□□ -1.81
SYPL1-203ENST00000460770 OR56A1Q8NGH5 318 aa3.77□□□□□ -1.81
SYPL1-203ENST00000460770 FUBP3Q96I24 572 aaKnown RBP eCLIP3.77□□□□□ -1.81
SYPL1-203ENST00000460770 PHACTR3Q96KR7 559 aa3.77□□□□□ -1.81
SYPL1-203ENST00000460770 UHRF1Q96T88 793 aaPredicted RBP3.77□□□□□ -1.81
SYPL1-203ENST00000460770 HEPHQ9BQS7 1158 aa3.77□□□□□ -1.81
SYPL1-203ENST00000460770 BCO1Q9HAY6 547 aa3.77□□□□□ -1.81
SYPL1-203ENST00000460770 GALNT9Q9HCQ5 603 aa3.77□□□□□ -1.81
SYPL1-203ENST00000460770 MAPRE3Q9UPY8 281 aa3.77□□□□□ -1.81
SYPL1-203ENST00000460770 DRGXA6NNA5 263 aa3.76□□□□□ -1.81
SYPL1-203ENST00000460770 ORC4O43929 436 aa3.76□□□□□ -1.81
SYPL1-203ENST00000460770 ZEB2O60315 1214 aa3.76□□□□□ -1.81
SYPL1-203ENST00000460770 CLK3P49761 638 aaKnown RBP3.76□□□□□ -1.81
SYPL1-203ENST00000460770 CHN2P52757 468 aa3.76□□□□□ -1.81
SYPL1-203ENST00000460770 PER3P56645 1201 aa3.76□□□□□ -1.81
SYPL1-203ENST00000460770 SP140Q13342 867 aa3.76□□□□□ -1.81
SYPL1-203ENST00000460770 DHCR24Q15392 516 aa3.76□□□□□ -1.81
SYPL1-203ENST00000460770 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.76□□□□□ -1.81
SYPL1-203ENST00000460770 ANKS6Q68DC2 871 aa3.76□□□□□ -1.81
SYPL1-203ENST00000460770 THNSL2Q86YJ6 484 aa3.76□□□□□ -1.81
SYPL1-203ENST00000460770 LYSMD2Q8IV50 215 aa3.76□□□□□ -1.81
SYPL1-203ENST00000460770 SLC41A1Q8IVJ1 513 aa3.76□□□□□ -1.81
SYPL1-203ENST00000460770 SLC44A3Q8N4M1 653 aa3.76□□□□□ -1.81
SYPL1-203ENST00000460770 BOLLQ8N9W6 283 aaKnown RBP3.76□□□□□ -1.81
SYPL1-203ENST00000460770 SIMC1Q8NDZ2 872 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms