RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 USP20Q9Y2K6 914 aa13.01□□□□□ -0.33
SOX2-OT-201ENST00000460739 KMT2EQ8IZD2 1858 aa13.01□□□□□ -0.33
SOX2-OT-201ENST00000460739 PHLPP2Q6ZVD8 1323 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 TMEM221A6NGB7 291 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 C2CD4DB7Z1M9 353 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 M0R296 226 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 HIP1RO75146 1068 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 RECQL4O94761 1208 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 THP07101 528 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 LIG1P18858 919 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 SP100P23497 879 aaPredicted RBP13□□□□□ -0.33
SOX2-OT-201ENST00000460739 NPTX2P47972 431 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 PEX3P56589 373 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 SIGLEC14Q08ET2 396 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 MAPK7Q13164 816 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 HSP90AA2PQ14568 343 aaPredicted RBP13□□□□□ -0.33
SOX2-OT-201ENST00000460739 USP41Q3LFD5 358 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 DCAF4L1Q3SXM0 396 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 NT5DC1Q5TFE4 455 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 ATF7IP2Q5U623 682 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 ARL6IP4Q66PJ3 421 aaKnown RBP13□□□□□ -0.33
SOX2-OT-201ENST00000460739 RINT1Q6NUQ1 792 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 C15orf39Q6ZRI6 1047 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 C1orf186Q6ZWK4 172 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 KCNK18Q7Z418 384 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 CMASQ8NFW8 434 aaPredicted RBP13□□□□□ -0.33
SOX2-OT-201ENST00000460739 FEZF2Q8TBJ5 459 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 RABGGTAQ92696 567 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 DRC1Q96MC2 740 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 PAAF1Q9BRP4 392 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 KCNH6Q9H252 994 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 CXCL16Q9H2A7 254 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13□□□□□ -0.33
SOX2-OT-201ENST00000460739 FNIP2Q9P278 1114 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 DPP7Q9UHL4 492 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 SMC3Q9UQE7 1217 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 TNFSF13BQ9Y275 285 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 USTQ9Y2C2 406 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 ZSCAN21Q9Y5A6 473 aaPredicted RBP13□□□□□ -0.33
SOX2-OT-201ENST00000460739 WDFY4Q6ZS81 3184 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 MYO10Q9HD67 2058 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 VWA8A3KMH1 1905 aa13□□□□□ -0.33
SOX2-OT-201ENST00000460739 SF3B1O75533 1304 aaKnown RBP eCLIP12.99□□□□□ -0.33
SOX2-OT-201ENST00000460739 SPDYE4A6NLX3 237 aa12.99□□□□□ -0.33
SOX2-OT-201ENST00000460739 CCDC169A6NNP5 214 aa12.99□□□□□ -0.33
SOX2-OT-201ENST00000460739 TADA2AO75478 443 aa12.99□□□□□ -0.33
SOX2-OT-201ENST00000460739 PAPLNO95428 1278 aa12.99□□□□□ -0.33
SOX2-OT-201ENST00000460739 GLUD1P00367 558 aa12.99□□□□□ -0.33
SOX2-OT-201ENST00000460739 GUCY2CP25092 1073 aa12.99□□□□□ -0.33
SOX2-OT-201ENST00000460739 DMP1Q13316 513 aaPredicted RBP12.99□□□□□ -0.33
SOX2-OT-201ENST00000460739 ELMSAN1Q6PJG2 1045 aa12.99□□□□□ -0.33
SOX2-OT-201ENST00000460739 APBB1IPQ7Z5R6 666 aaPredicted RBP12.99□□□□□ -0.33
SOX2-OT-201ENST00000460739 ZDHHC14Q8IZN3 488 aa12.99□□□□□ -0.33
SOX2-OT-201ENST00000460739 TDRD5Q8NAT2 981 aaKnown RBP12.99□□□□□ -0.33
SOX2-OT-201ENST00000460739 HDAC7Q8WUI4 952 aa12.99□□□□□ -0.33
SOX2-OT-201ENST00000460739 B3GALT6Q96L58 329 aa12.99□□□□□ -0.33
SOX2-OT-201ENST00000460739 PNMA5Q96PV4 448 aa12.99□□□□□ -0.33
SOX2-OT-201ENST00000460739 RUSC1Q9BVN2 902 aa12.99□□□□□ -0.33
SOX2-OT-201ENST00000460739 TIPINQ9BVW5 301 aa12.99□□□□□ -0.33
SOX2-OT-201ENST00000460739 RHOBTB2Q9BYZ6 727 aa12.99□□□□□ -0.33
SOX2-OT-201ENST00000460739 TMEM134Q9H6X4 195 aa12.99□□□□□ -0.33
SOX2-OT-201ENST00000460739 C17orf75Q9HAS0 396 aa12.99□□□□□ -0.33
SOX2-OT-201ENST00000460739 MAN1C1Q9NR34 630 aa12.99□□□□□ -0.33
SOX2-OT-201ENST00000460739 ARHGAP28Q9P2N2 729 aa12.99□□□□□ -0.33
SOX2-OT-201ENST00000460739 CACNG4Q9UBN1 327 aa12.99□□□□□ -0.33
SOX2-OT-201ENST00000460739 RBM19Q9Y4C8 960 aaKnown RBP12.99□□□□□ -0.33
SOX2-OT-201ENST00000460739 CITO14578 2027 aa12.99□□□□□ -0.33
SOX2-OT-201ENST00000460739 PDCD11Q14690 1871 aaKnown RBP12.99□□□□□ -0.33
SOX2-OT-201ENST00000460739 MUC6Q6W4X9 2439 aa12.98□□□□□ -0.33
SOX2-OT-201ENST00000460739 VWA3AA6NCI4 1184 aa12.98□□□□□ -0.33
SOX2-OT-201ENST00000460739 KIF4AO95239 1232 aa12.98□□□□□ -0.33
SOX2-OT-201ENST00000460739 CREMQ03060 361 aa12.98□□□□□ -0.33
SOX2-OT-201ENST00000460739 LARP1BQ659C4 914 aaKnown RBP12.98□□□□□ -0.33
SOX2-OT-201ENST00000460739 LILRA6Q6PI73 481 aa12.98□□□□□ -0.33
SOX2-OT-201ENST00000460739 CYP26C1Q6V0L0 522 aa12.98□□□□□ -0.33
SOX2-OT-201ENST00000460739 TAS1R3Q7RTX0 852 aa12.98□□□□□ -0.33
SOX2-OT-201ENST00000460739 PLCD3Q8N3E9 789 aa12.98□□□□□ -0.33
SOX2-OT-201ENST00000460739 SYT2Q8N9I0 419 aaPredicted RBP12.98□□□□□ -0.33
SOX2-OT-201ENST00000460739 KREMEN2Q8NCW0 462 aa12.98□□□□□ -0.33
SOX2-OT-201ENST00000460739 PBXIP1Q96AQ6 731 aa12.98□□□□□ -0.33
SOX2-OT-201ENST00000460739 ASIC4Q96FT7 647 aa12.98□□□□□ -0.33
SOX2-OT-201ENST00000460739 PPP1R10Q96QC0 940 aaKnown RBP12.98□□□□□ -0.33
SOX2-OT-201ENST00000460739 ACO2Q99798 780 aaKnown RBP12.98□□□□□ -0.33
SOX2-OT-201ENST00000460739 NTPCRQ9BSD7 190 aaKnown RBP12.98□□□□□ -0.33
SOX2-OT-201ENST00000460739 NT5C3AQ9H0P0 336 aa12.98□□□□□ -0.33
SOX2-OT-201ENST00000460739 PTPRHQ9HD43 1115 aa12.98□□□□□ -0.33
SOX2-OT-201ENST00000460739 KMT5AQ9NQR1 393 aa12.98□□□□□ -0.33
SOX2-OT-201ENST00000460739 SORCS3Q9UPU3 1222 aa12.98□□□□□ -0.33
SOX2-OT-201ENST00000460739 GDAQ9Y2T3 454 aa12.98□□□□□ -0.33
SOX2-OT-201ENST00000460739 CASTOR2A6NHX0 329 aa12.97□□□□□ -0.33
SOX2-OT-201ENST00000460739 SLC26A4O43511 780 aa12.97□□□□□ -0.33
SOX2-OT-201ENST00000460739 PROZP22891 400 aa12.97□□□□□ -0.33
SOX2-OT-201ENST00000460739 GRM5P41594 1212 aa12.97□□□□□ -0.33
SOX2-OT-201ENST00000460739 ZRSR1Q15695 479 aaKnown RBP12.97□□□□□ -0.33
SOX2-OT-201ENST00000460739 RTP2Q5QGT7 225 aa12.97□□□□□ -0.33
SOX2-OT-201ENST00000460739 CCDC149Q6ZUS6 474 aa12.97□□□□□ -0.33
SOX2-OT-201ENST00000460739 ZBTB33Q86T24 672 aa12.97□□□□□ -0.33
SOX2-OT-201ENST00000460739 PALB2Q86YC2 1186 aa12.97□□□□□ -0.33
SOX2-OT-201ENST00000460739 UBALD2Q8IYN6 164 aa12.97□□□□□ -0.33
SOX2-OT-201ENST00000460739 SPIRE2Q8WWL2 714 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms