RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 SMC1BQ8NDV3 1235 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 OR6J1Q8NGC5 347 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 TAS1R2Q8TE23 839 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 SEMA4DQ92854 862 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 ZBTB45Q96K62 511 aaPredicted RBP8.71□□□□□ -1.02
SFPQ-202ENST00000460428 KREMEN1Q96MU8 473 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 CGRRF1Q99675 332 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 APBA2Q99767 749 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 FAM213AQ9BRX8 229 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 MSTO1Q9BUK6 570 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 CFHR5Q9BXR6 569 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 SUGCTQ9HAC7 445 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 UBE2TQ9NPD8 197 aaPredicted RBP8.71□□□□□ -1.02
SFPQ-202ENST00000460428 PRMT7Q9NVM4 692 aaPredicted RBP8.71□□□□□ -1.02
SFPQ-202ENST00000460428 TRIM10Q9UDY6 481 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 CPSF3Q9UKF6 684 aaKnown RBP8.71□□□□□ -1.02
SFPQ-202ENST00000460428 JRKLQ9Y4A0 524 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 PCDHGC5Q9Y5F6 944 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 DUSP10Q9Y6W6 482 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 SMIM35A0A1B0GVV1 85 aa8.7□□□□□ -1.02
SFPQ-202ENST00000460428 MBLAC1A4D2B0 266 aaPredicted RBP8.7□□□□□ -1.02
SFPQ-202ENST00000460428 KIF3CO14782 793 aa8.7□□□□□ -1.02
SFPQ-202ENST00000460428 B4GALT4O60513 344 aa8.7□□□□□ -1.02
SFPQ-202ENST00000460428 LRRN2O75325 713 aa8.7□□□□□ -1.02
SFPQ-202ENST00000460428 TADA3O75528 432 aa8.7□□□□□ -1.02
SFPQ-202ENST00000460428 HOXC8P31273 242 aa8.7□□□□□ -1.02
SFPQ-202ENST00000460428 PHKA2P46019 1235 aa8.7□□□□□ -1.02
SFPQ-202ENST00000460428 MFAP3P55082 362 aa8.7□□□□□ -1.02
SFPQ-202ENST00000460428 HADHBP55084 474 aaKnown RBP8.7□□□□□ -1.02
SFPQ-202ENST00000460428 ADAM17P78536 824 aa8.7□□□□□ -1.02
SFPQ-202ENST00000460428 MAP2K1Q02750 393 aaPredicted RBP8.7□□□□□ -1.02
SFPQ-202ENST00000460428 NCBP1Q09161 790 aaKnown RBP8.7□□□□□ -1.02
SFPQ-202ENST00000460428 AMHR2Q16671 573 aa8.7□□□□□ -1.02
SFPQ-202ENST00000460428 KYAT1Q16773 422 aa8.7□□□□□ -1.02
SFPQ-202ENST00000460428 MPZL3Q6UWV2 235 aa8.7□□□□□ -1.02
SFPQ-202ENST00000460428 SRGAP1Q7Z6B7 1085 aa8.7□□□□□ -1.02
SFPQ-202ENST00000460428 RHPN2Q8IUC4 686 aa8.7□□□□□ -1.02
SFPQ-202ENST00000460428 KIAA0319LQ8IZA0 1049 aa8.7□□□□□ -1.02
SFPQ-202ENST00000460428 LRRC71Q8N4P6 559 aa8.7□□□□□ -1.02
SFPQ-202ENST00000460428 LNX1Q8TBB1 728 aaPredicted RBP8.7□□□□□ -1.02
SFPQ-202ENST00000460428 TRAPPC12Q8WVT3 735 aa8.7□□□□□ -1.02
SFPQ-202ENST00000460428 KAT2BQ92831 832 aa8.7□□□□□ -1.02
SFPQ-202ENST00000460428 CCDC127Q96BQ5 260 aa8.7□□□□□ -1.02
SFPQ-202ENST00000460428 NT5C1BQ96P26 610 aa8.7□□□□□ -1.02
SFPQ-202ENST00000460428 NOX5Q96PH1 765 aa8.7□□□□□ -1.02
SFPQ-202ENST00000460428 FNBP1Q96RU3 617 aa8.7□□□□□ -1.02
SFPQ-202ENST00000460428 POP1Q99575 1024 aaKnown RBP8.7□□□□□ -1.02
SFPQ-202ENST00000460428 ISCUQ9H1K1 167 aa8.7□□□□□ -1.02
SFPQ-202ENST00000460428 RBAKQ9NYW8 714 aaPredicted RBP8.7□□□□□ -1.02
SFPQ-202ENST00000460428 FLRT1Q9NZU1 646 aa8.7□□□□□ -1.02
SFPQ-202ENST00000460428 SALL4Q9UJQ4 1053 aa8.7□□□□□ -1.02
SFPQ-202ENST00000460428 TSKSQ9UJT2 592 aa8.7□□□□□ -1.02
SFPQ-202ENST00000460428 CNTN6Q9UQ52 1028 aa8.7□□□□□ -1.02
SFPQ-202ENST00000460428 NRCAMQ92823 1304 aa8.7□□□□□ -1.02
SFPQ-202ENST00000460428 TMEM88BA6NKF7 163 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 TTLL13PA6NNM8 815 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 CES2O00748 559 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 KPNA6O60684 536 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 VNN1O95497 513 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 H2AFZP0C0S5 128 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 TMEM253P0C7T8 217 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 SRGAP2CP0DJJ0 459 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 MCF2P10911 925 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 ACOT2P49753 483 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 CPT1AP50416 773 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 WNT7BP56706 349 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 ITIH3Q06033 890 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 PPFIA1Q13136 1202 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 CRHR2Q13324 411 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 GRIK4Q16099 956 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 IFI16Q16666 785 aaKnown RBP8.69□□□□□ -1.02
SFPQ-202ENST00000460428 KIAA0753Q2KHM9 967 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 ATF7IP2Q5U623 682 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 TDRD10Q5VZ19 366 aaKnown RBP8.69□□□□□ -1.02
SFPQ-202ENST00000460428 H2AFVQ71UI9 128 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 ZNF572Q7Z3I7 529 aaPredicted RBP8.69□□□□□ -1.02
SFPQ-202ENST00000460428 SLFN11Q7Z7L1 901 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 ZNF677Q86XU0 584 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 UBR7Q8N806 425 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 RPGRIP1Q96KN7 1286 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 ALS2CR12Q96Q35 445 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 AGPAT1Q99943 283 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 CARD6Q9BX69 1037 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 TOPORSQ9NS56 1045 aaPredicted RBP8.69□□□□□ -1.02
SFPQ-202ENST00000460428 RNF14Q9UBS8 474 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 NOCTQ9UK39 431 aaKnown RBP8.69□□□□□ -1.02
SFPQ-202ENST00000460428 ZHX1Q9UKY1 873 aaPredicted RBP8.69□□□□□ -1.02
SFPQ-202ENST00000460428 TFR2Q9UP52 801 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 SAR1BQ9Y6B6 198 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 CAPN6Q9Y6Q1 641 aa8.69□□□□□ -1.02
SFPQ-202ENST00000460428 MGAMO43451 1857 aa8.68□□□□□ -1.02
SFPQ-202ENST00000460428 A0A1B0GUA9 196 aa8.68□□□□□ -1.02
SFPQ-202ENST00000460428 ANKRD62A6NC57 917 aa8.68□□□□□ -1.02
SFPQ-202ENST00000460428 TNPO2O14787 897 aaKnown RBP8.68□□□□□ -1.02
SFPQ-202ENST00000460428 DYNC1LI2O43237 492 aaPredicted RBP8.68□□□□□ -1.02
SFPQ-202ENST00000460428 ZEB2O60315 1214 aa8.68□□□□□ -1.02
SFPQ-202ENST00000460428 DUSP11O75319 330 aaKnown RBP8.68□□□□□ -1.02
SFPQ-202ENST00000460428 MTA2O94776 668 aa8.68□□□□□ -1.02
SFPQ-202ENST00000460428 IL18RAPO95256 599 aa8.68□□□□□ -1.02
SFPQ-202ENST00000460428 HLA-DRAP01903 254 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms