RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 H3BRB1 525 aa11.21□□□□□ -0.62
HERC4-207ENST00000460168 ADCY6O43306 1168 aa11.21□□□□□ -0.62
HERC4-207ENST00000460168 AOC2O75106 756 aa11.21□□□□□ -0.62
HERC4-207ENST00000460168 MMP3P08254 477 aa11.21□□□□□ -0.62
HERC4-207ENST00000460168 HARSP12081 509 aaKnown RBP11.21□□□□□ -0.62
HERC4-207ENST00000460168 FCGRTP55899 365 aa11.21□□□□□ -0.62
HERC4-207ENST00000460168 IGBP1P78318 339 aa11.21□□□□□ -0.62
HERC4-207ENST00000460168 PTK7Q13308 1070 aa11.21□□□□□ -0.62
HERC4-207ENST00000460168 DRP2Q13474 957 aa11.21□□□□□ -0.62
HERC4-207ENST00000460168 DGKDQ16760 1214 aa11.21□□□□□ -0.62
HERC4-207ENST00000460168 BRDTQ58F21 947 aaPredicted RBP11.21□□□□□ -0.62
HERC4-207ENST00000460168 FIGNQ5HY92 759 aa11.21□□□□□ -0.62
HERC4-207ENST00000460168 IER5Q5VY09 327 aa11.21□□□□□ -0.62
HERC4-207ENST00000460168 OLFML2BQ68BL8 750 aa11.21□□□□□ -0.62
HERC4-207ENST00000460168 C12orf56Q8IXR9 622 aa11.21□□□□□ -0.62
HERC4-207ENST00000460168 LRRC71Q8N4P6 559 aa11.21□□□□□ -0.62
HERC4-207ENST00000460168 METTL13Q8N6R0 699 aa11.21□□□□□ -0.62
HERC4-207ENST00000460168 XXYLT1Q8NBI6 393 aa11.21□□□□□ -0.62
HERC4-207ENST00000460168 OR8K1Q8NGG5 319 aa11.21□□□□□ -0.62
HERC4-207ENST00000460168 PRPF31Q8WWY3 499 aaKnown RBP11.21□□□□□ -0.62
HERC4-207ENST00000460168 PSPC1Q8WXF1 523 aaKnown RBP11.21□□□□□ -0.62
HERC4-207ENST00000460168 EZH1Q92800 747 aaPredicted RBP11.21□□□□□ -0.62
HERC4-207ENST00000460168 CAPNS2Q96L46 248 aa11.21□□□□□ -0.62
HERC4-207ENST00000460168 TUT1Q9H6E5 874 aaKnown RBP11.21□□□□□ -0.62
HERC4-207ENST00000460168 HOMER3Q9NSC5 361 aa11.21□□□□□ -0.62
HERC4-207ENST00000460168 TRMT1Q9NXH9 659 aaKnown RBP11.21□□□□□ -0.62
HERC4-207ENST00000460168 GJD2Q9UKL4 321 aa11.21□□□□□ -0.62
HERC4-207ENST00000460168 A0A087WUV0 522 aaPredicted RBP11.2□□□□□ -0.62
HERC4-207ENST00000460168 RASSF10A6NK89 507 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 K7ERI5 159 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 KRT13P13646 458 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 PSMC4P43686 418 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 BFSP1Q12934 665 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 IRF5Q13568 498 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 MXD4Q14582 209 aaPredicted RBP11.2□□□□□ -0.62
HERC4-207ENST00000460168 E4F1Q66K89 784 aaPredicted RBP11.2□□□□□ -0.62
HERC4-207ENST00000460168 CACNA2D4Q7Z3S7 1137 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 TADA2BQ86TJ2 420 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 PARD3BQ8TEW8 1205 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 POMGNT1Q8WZA1 660 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 ATP8A1Q9Y2Q0 1164 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 A0A1W2PQJ5 194 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 SOWAHDA6NJG2 315 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 ANKRD63C9JTQ0 380 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 KIF2AO00139 706 aaPredicted RBP11.2□□□□□ -0.62
HERC4-207ENST00000460168 DYNC1LI2O43237 492 aaPredicted RBP11.2□□□□□ -0.62
HERC4-207ENST00000460168 E2F6O75461 281 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 INSRRP14616 1297 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 CTGFP29279 349 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 ACTN2P35609 894 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 LIG4P49917 911 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 LACTBP83111 547 aaPredicted RBP11.2□□□□□ -0.62
HERC4-207ENST00000460168 KCNMA1Q12791 1236 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 SNX1Q13596 522 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 CAPSQ13938 189 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 INTS8Q75QN2 995 aaKnown RBP11.2□□□□□ -0.62
HERC4-207ENST00000460168 CCDC80Q76M96 950 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 TAS1R3Q7RTX0 852 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 SDCCAG8Q86SQ7 713 aaPredicted RBP11.2□□□□□ -0.62
HERC4-207ENST00000460168 TLK2Q86UE8 772 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 CCAR2Q8N163 923 aaKnown RBP11.2□□□□□ -0.62
HERC4-207ENST00000460168 TMEM174Q8WUU8 243 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 DNAJC7Q99615 494 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 C16orf70Q9BSU1 422 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 CREBZFQ9NS37 354 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 ZNHIT6Q9NWK9 470 aaKnown RBP11.2□□□□□ -0.62
HERC4-207ENST00000460168 RABL2AQ9UBK7 228 aaPredicted RBP11.2□□□□□ -0.62
HERC4-207ENST00000460168 COMMD10Q9Y6G5 202 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 MGAMO43451 1857 aa11.2□□□□□ -0.62
HERC4-207ENST00000460168 IGKV6-21A0A0C4DH24 114 aa11.19□□□□□ -0.62
HERC4-207ENST00000460168 USP27XA6NNY8 438 aa11.19□□□□□ -0.62
HERC4-207ENST00000460168 EPHB6O15197 1021 aa11.19□□□□□ -0.62
HERC4-207ENST00000460168 ZNF865P0CJ78 1059 aaPredicted RBP11.19□□□□□ -0.62
HERC4-207ENST00000460168 SRGAP2CP0DJJ0 459 aa11.19□□□□□ -0.62
HERC4-207ENST00000460168 ADSSP30520 456 aa11.19□□□□□ -0.62
HERC4-207ENST00000460168 LAMTOR4Q0VGL1 99 aa11.19□□□□□ -0.62
HERC4-207ENST00000460168 EXOC3L4Q17RC7 722 aa11.19□□□□□ -0.62
HERC4-207ENST00000460168 ZNF484Q5JVG2 852 aa11.19□□□□□ -0.62
HERC4-207ENST00000460168 EFCAB12Q6NXP0 572 aa11.19□□□□□ -0.62
HERC4-207ENST00000460168 CYP26C1Q6V0L0 522 aa11.19□□□□□ -0.62
HERC4-207ENST00000460168 RHPN2Q8IUC4 686 aa11.19□□□□□ -0.62
HERC4-207ENST00000460168 TMTC1Q8IUR5 882 aa11.19□□□□□ -0.62
HERC4-207ENST00000460168 RNF149Q8NC42 400 aa11.19□□□□□ -0.62
HERC4-207ENST00000460168 N4BP2L2Q92802 583 aaPredicted RBP11.19□□□□□ -0.62
HERC4-207ENST00000460168 C16orf45Q96MC5 204 aaPredicted RBP11.19□□□□□ -0.62
HERC4-207ENST00000460168 LSM14BQ9BX40 385 aaKnown RBP11.19□□□□□ -0.62
HERC4-207ENST00000460168 ARHGAP39Q9C0H5 1083 aa11.19□□□□□ -0.62
HERC4-207ENST00000460168 TMEM165Q9HC07 324 aa11.19□□□□□ -0.62
HERC4-207ENST00000460168 N6AMT1Q9Y5N5 214 aa11.19□□□□□ -0.62
HERC4-207ENST00000460168 GOLGA8IPA6NC78 632 aa11.19□□□□□ -0.62
HERC4-207ENST00000460168 GOLGA8JA6NMD2 632 aa11.19□□□□□ -0.62
HERC4-207ENST00000460168 ADCY3O60266 1144 aa11.19□□□□□ -0.62
HERC4-207ENST00000460168 TRIM49P0CI25 452 aa11.19□□□□□ -0.62
HERC4-207ENST00000460168 TRIM49CP0CI26 452 aa11.19□□□□□ -0.62
HERC4-207ENST00000460168 CLCN3P51790 818 aa11.19□□□□□ -0.62
HERC4-207ENST00000460168 CHMP4BP1P59074 171 aa11.19□□□□□ -0.62
HERC4-207ENST00000460168 SNRNP35Q16560 246 aaKnown RBP11.19□□□□□ -0.62
HERC4-207ENST00000460168 SLC39A4Q6P5W5 647 aa11.19□□□□□ -0.62
HERC4-207ENST00000460168 EXOC4Q96A65 974 aa11.19□□□□□ -0.62
HERC4-207ENST00000460168 LENG1Q96BZ8 264 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms