RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 C1RP00736 705 aa25.12■■□□□ 1.61
PTPN4-207ENST00000460162 PRPHP41219 470 aa25.12■■□□□ 1.61
PTPN4-207ENST00000460162 NHLH1Q02575 133 aa25.12■■□□□ 1.61
PTPN4-207ENST00000460162 CREMQ03060 361 aa25.12■■□□□ 1.61
PTPN4-207ENST00000460162 USP41Q3LFD5 358 aa25.12■■□□□ 1.61
PTPN4-207ENST00000460162 DCAF4L1Q3SXM0 396 aa25.12■■□□□ 1.61
PTPN4-207ENST00000460162 PRRX2Q99811 253 aa25.12■■□□□ 1.61
PTPN4-207ENST00000460162 RHOBTB2Q9BYZ6 727 aa25.12■■□□□ 1.61
PTPN4-207ENST00000460162 SF3B1O75533 1304 aaKnown RBP eCLIP25.12■■□□□ 1.619e-6■■■■■ 68.9
PTPN4-207ENST00000460162 MYO10Q9HD67 2058 aa25.11■■□□□ 1.61
PTPN4-207ENST00000460162 EDN1P05305 212 aa25.11■■□□□ 1.61
PTPN4-207ENST00000460162 HSP90AA2PQ14568 343 aaPredicted RBP25.11■■□□□ 1.61
PTPN4-207ENST00000460162 CYP26C1Q6V0L0 522 aa25.11■■□□□ 1.61
PTPN4-207ENST00000460162 ACSF2Q96CM8 615 aaPredicted RBP25.11■■□□□ 1.61
PTPN4-207ENST00000460162 KIFC3Q9BVG8 833 aa25.11■■□□□ 1.61
PTPN4-207ENST00000460162 GPR62Q9BZJ7 368 aa25.11■■□□□ 1.61
PTPN4-207ENST00000460162 PTGESO14684 152 aa25.1■■□□□ 1.61
PTPN4-207ENST00000460162 LIG1P18858 919 aa25.1■■□□□ 1.61
PTPN4-207ENST00000460162 KRT79Q5XKE5 535 aa25.1■■□□□ 1.61
PTPN4-207ENST00000460162 OTOP3Q7RTS5 596 aa25.1■■□□□ 1.61
PTPN4-207ENST00000460162 FEZF2Q8TBJ5 459 aa25.1■■□□□ 1.61
PTPN4-207ENST00000460162 HDAC7Q8WUI4 952 aa25.1■■□□□ 1.61
PTPN4-207ENST00000460162 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.1■■□□□ 1.61
PTPN4-207ENST00000460162 SNTG2Q9NY99 539 aa25.1■■□□□ 1.61
PTPN4-207ENST00000460162 FNIP2Q9P278 1114 aa25.1■■□□□ 1.61
PTPN4-207ENST00000460162 PHLPP2Q6ZVD8 1323 aa25.1■■□□□ 1.61
PTPN4-207ENST00000460162 BRD1O95696 1058 aa25.09■■□□□ 1.61
PTPN4-207ENST00000460162 THP07101 528 aa25.09■■□□□ 1.61
PTPN4-207ENST00000460162 RILPL1Q5EBL4 403 aa25.09■■□□□ 1.61
PTPN4-207ENST00000460162 EEF1DP3Q658K8 133 aa25.09■■□□□ 1.61
PTPN4-207ENST00000460162 APBB1IPQ7Z5R6 666 aaPredicted RBP25.09■■□□□ 1.61
PTPN4-207ENST00000460162 DNM3Q9UQ16 869 aa25.09■■□□□ 1.61
PTPN4-207ENST00000460162 TADA2AO75478 443 aa25.08■■□□□ 1.61
PTPN4-207ENST00000460162 PAPLNO95428 1278 aa25.08■■□□□ 1.61
PTPN4-207ENST00000460162 DTHD1Q6ZMT9 781 aa25.08■■□□□ 1.61
PTPN4-207ENST00000460162 RIN2Q8WYP3 895 aaPredicted RBP25.08■■□□□ 1.61
PTPN4-207ENST00000460162 B3GALT6Q96L58 329 aa25.08■■□□□ 1.61
PTPN4-207ENST00000460162 PAAF1Q9BRP4 392 aa25.08■■□□□ 1.61
PTPN4-207ENST00000460162 PLEKHA4Q9H4M7 779 aa25.08■■□□□ 1.61
PTPN4-207ENST00000460162 CASTOR2A6NHX0 329 aa25.07■■□□□ 1.6
PTPN4-207ENST00000460162 PP2D1A8MPX8 630 aa25.07■■□□□ 1.6
PTPN4-207ENST00000460162 KIF4AO95239 1232 aa25.07■■□□□ 1.6
PTPN4-207ENST00000460162 ASGR2P07307 311 aa25.07■■□□□ 1.6
PTPN4-207ENST00000460162 NAB2Q15742 525 aa25.07■■□□□ 1.6
PTPN4-207ENST00000460162 ATF7IP2Q5U623 682 aa25.07■■□□□ 1.6
PTPN4-207ENST00000460162 PRSS33Q8NF86 280 aa25.07■■□□□ 1.6
PTPN4-207ENST00000460162 RABGGTAQ92696 567 aa25.07■■□□□ 1.6
PTPN4-207ENST00000460162 DRC1Q96MC2 740 aa25.07■■□□□ 1.6
PTPN4-207ENST00000460162 UPF2Q9HAU5 1272 aaKnown RBP25.07■■□□□ 1.6
PTPN4-207ENST00000460162 CACNG4Q9UBN1 327 aa25.07■■□□□ 1.6
PTPN4-207ENST00000460162 LIMD1Q9UGP4 676 aa25.07■■□□□ 1.6
PTPN4-207ENST00000460162 USP20Q9Y2K6 914 aa25.07■■□□□ 1.6
PTPN4-207ENST00000460162 VWA8A3KMH1 1905 aa25.06■■□□□ 1.6
PTPN4-207ENST00000460162 CCDC195A0A1B0GUA6 201 aa25.06■■□□□ 1.6
PTPN4-207ENST00000460162 E9PMD0 336 aa25.06■■□□□ 1.6
PTPN4-207ENST00000460162 PTPN5P54829 565 aa25.06■■□□□ 1.6
PTPN4-207ENST00000460162 ELAVL2Q12926 359 aaKnown RBP25.06■■□□□ 1.6
PTPN4-207ENST00000460162 DMP1Q13316 513 aaPredicted RBP25.06■■□□□ 1.6
PTPN4-207ENST00000460162 RTP2Q5QGT7 225 aa25.06■■□□□ 1.6
PTPN4-207ENST00000460162 MCTP1Q6DN14 999 aa25.06■■□□□ 1.6
PTPN4-207ENST00000460162 STAMQ92783 540 aa25.06■■□□□ 1.6
PTPN4-207ENST00000460162 TMX3Q96JJ7 454 aa25.06■■□□□ 1.6
PTPN4-207ENST00000460162 ZDHHC7Q9NXF8 308 aa25.06■■□□□ 1.6
PTPN4-207ENST00000460162 TNFSF13BQ9Y275 285 aa25.06■■□□□ 1.6
PTPN4-207ENST00000460162 CLUHO75153 1309 aa25.06■■□□□ 1.6
PTPN4-207ENST00000460162 TRIP11Q15643 1979 aa25.05■■□□□ 1.6
PTPN4-207ENST00000460162 K7ERI5 159 aa25.05■■□□□ 1.6
PTPN4-207ENST00000460162 TGM5O43548 720 aa25.05■■□□□ 1.6
PTPN4-207ENST00000460162 VCPP55072 806 aaKnown RBP25.05■■□□□ 1.6
PTPN4-207ENST00000460162 PEX3P56589 373 aa25.05■■□□□ 1.6
PTPN4-207ENST00000460162 ATP2C1P98194 919 aaPredicted RBP25.05■■□□□ 1.6
PTPN4-207ENST00000460162 IL17AQ16552 155 aa25.05■■□□□ 1.6
PTPN4-207ENST00000460162 IER5LQ5T953 404 aa25.05■■□□□ 1.6
PTPN4-207ENST00000460162 NT5DC1Q5TFE4 455 aa25.05■■□□□ 1.6
PTPN4-207ENST00000460162 DAW1Q8N136 415 aa25.05■■□□□ 1.6
PTPN4-207ENST00000460162 KCTD17Q8N5Z5 321 aa25.05■■□□□ 1.6
PTPN4-207ENST00000460162 HASPINQ8TF76 798 aa25.05■■□□□ 1.6
PTPN4-207ENST00000460162 PIK3R5Q8WYR1 880 aa25.05■■□□□ 1.6
PTPN4-207ENST00000460162 TTPALQ9BTX7 342 aa25.05■■□□□ 1.6
PTPN4-207ENST00000460162 C17orf75Q9HAS0 396 aa25.05■■□□□ 1.6
PTPN4-207ENST00000460162 POLD4Q9HCU8 107 aa25.05■■□□□ 1.6
PTPN4-207ENST00000460162 WDR6Q9NNW5 1121 aaKnown RBP25.05■■□□□ 1.6
PTPN4-207ENST00000460162 GDAQ9Y2T3 454 aa25.05■■□□□ 1.6
PTPN4-207ENST00000460162 MYH11P35749 1972 aa25.05■■□□□ 1.6
PTPN4-207ENST00000460162 HIP1RO75146 1068 aa25.04■■□□□ 1.6
PTPN4-207ENST00000460162 RFPL2O75678 378 aa25.04■■□□□ 1.6
PTPN4-207ENST00000460162 NPTX2P47972 431 aa25.04■■□□□ 1.6
PTPN4-207ENST00000460162 PDXDC1Q6P996 788 aa25.04■■□□□ 1.6
PTPN4-207ENST00000460162 PALB2Q86YC2 1186 aa25.04■■□□□ 1.6
PTPN4-207ENST00000460162 SMG7Q92540 1137 aaKnown RBP25.04■■□□□ 1.6
PTPN4-207ENST00000460162 MMTAG2Q9BU76 263 aaKnown RBP25.04■■□□□ 1.6
PTPN4-207ENST00000460162 RUSC1Q9BVN2 902 aa25.04■■□□□ 1.6
PTPN4-207ENST00000460162 TIPINQ9BVW5 301 aa25.04■■□□□ 1.6
PTPN4-207ENST00000460162 CXCL16Q9H2A7 254 aa25.04■■□□□ 1.6
PTPN4-207ENST00000460162 SMOC2Q9H3U7 446 aa25.04■■□□□ 1.6
PTPN4-207ENST00000460162 TMEM134Q9H6X4 195 aa25.04■■□□□ 1.6
PTPN4-207ENST00000460162 ARHGAP28Q9P2N2 729 aa25.04■■□□□ 1.6
PTPN4-207ENST00000460162 CCDC169A6NNP5 214 aa25.03■■□□□ 1.6
PTPN4-207ENST00000460162 TMEM189-UBE2V1I3L0A0 370 aa25.03■■□□□ 1.6
PTPN4-207ENST00000460162 PDGFBP01127 241 aaPredicted RBP25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms