RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 GASTP01350 101 aa4.33□□□□□ -1.72
VPS8-215ENST00000460158 LPOP22079 712 aaPredicted RBP4.33□□□□□ -1.72
VPS8-215ENST00000460158 ZNF267Q14586 743 aaPredicted RBP4.33□□□□□ -1.72
VPS8-215ENST00000460158 GRM7Q14831 915 aa4.33□□□□□ -1.72
VPS8-215ENST00000460158 MLC1Q15049 377 aa4.33□□□□□ -1.72
VPS8-215ENST00000460158 FAM214AQ32MH5 1076 aa4.33□□□□□ -1.72
VPS8-215ENST00000460158 IFIT1BQ5T764 474 aaKnown RBP4.33□□□□□ -1.72
VPS8-215ENST00000460158 NXNQ6DKJ4 435 aa4.33□□□□□ -1.72
VPS8-215ENST00000460158 FAM111BQ6SJ93 734 aa4.33□□□□□ -1.72
VPS8-215ENST00000460158 GLB1LQ6UWU2 654 aa4.33□□□□□ -1.72
VPS8-215ENST00000460158 USP45Q70EL2 814 aa4.33□□□□□ -1.72
VPS8-215ENST00000460158 MIGA2Q7L4E1 593 aa4.33□□□□□ -1.72
VPS8-215ENST00000460158 EPM2AIP1Q7L775 607 aaPredicted RBP4.33□□□□□ -1.72
VPS8-215ENST00000460158 C14orf80Q86SX3 495 aa4.33□□□□□ -1.72
VPS8-215ENST00000460158 WDR75Q8IWA0 830 aaKnown RBP4.33□□□□□ -1.72
VPS8-215ENST00000460158 TCEAL8Q8IYN2 117 aa4.33□□□□□ -1.72
VPS8-215ENST00000460158 TRMT2AQ8IZ69 625 aaKnown RBP4.33□□□□□ -1.72
VPS8-215ENST00000460158 FUKQ8N0W3 1084 aa4.33□□□□□ -1.72
VPS8-215ENST00000460158 MYO1HQ8N1T3 1032 aa4.33□□□□□ -1.72
VPS8-215ENST00000460158 PRR18Q8N4B5 295 aa4.33□□□□□ -1.72
VPS8-215ENST00000460158 ZGPATQ8N5A5 531 aaKnown RBP4.33□□□□□ -1.72
VPS8-215ENST00000460158 SLC16A11Q8NCK7 471 aa4.33□□□□□ -1.72
VPS8-215ENST00000460158 CCHCR1Q8TD31 782 aa4.33□□□□□ -1.72
VPS8-215ENST00000460158 STON2Q8WXE9 905 aa4.33□□□□□ -1.72
VPS8-215ENST00000460158 DVL3Q92997 716 aaPredicted RBP4.33□□□□□ -1.72
VPS8-215ENST00000460158 CLIP3Q96DZ5 547 aa4.33□□□□□ -1.72
VPS8-215ENST00000460158 IL17RAQ96F46 866 aa4.33□□□□□ -1.72
VPS8-215ENST00000460158 CEP95Q96GE4 821 aa4.33□□□□□ -1.72
VPS8-215ENST00000460158 LOXL4Q96JB6 756 aa4.33□□□□□ -1.72
VPS8-215ENST00000460158 C8orf49Q96NF6 230 aa4.33□□□□□ -1.72
VPS8-215ENST00000460158 CDC5LQ99459 802 aaKnown RBP4.33□□□□□ -1.72
VPS8-215ENST00000460158 NELFAQ9H3P2 528 aa4.33□□□□□ -1.72
VPS8-215ENST00000460158 MYH16Q9H6N6 1097 aa4.33□□□□□ -1.72
VPS8-215ENST00000460158 PRDM16Q9HAZ2 1276 aa4.33□□□□□ -1.72
VPS8-215ENST00000460158 MSL2Q9HCI7 577 aa4.33□□□□□ -1.72
VPS8-215ENST00000460158 PLA2G3Q9NZ20 509 aa4.33□□□□□ -1.72
VPS8-215ENST00000460158 ZFR2Q9UPR6 939 aaKnown RBP4.33□□□□□ -1.72
VPS8-215ENST00000460158 HOXA3O43365 443 aaPredicted RBP4.32□□□□□ -1.72
VPS8-215ENST00000460158 AP1G1O43747 822 aa4.32□□□□□ -1.72
VPS8-215ENST00000460158 OFD1O75665 1012 aa4.32□□□□□ -1.72
VPS8-215ENST00000460158 AMY1AP04745 511 aa4.32□□□□□ -1.72
VPS8-215ENST00000460158 GUCY1A2P33402 732 aa4.32□□□□□ -1.72
VPS8-215ENST00000460158 PTPN7P35236 360 aa4.32□□□□□ -1.72
VPS8-215ENST00000460158 RPS19P39019 145 aaKnown RBP4.32□□□□□ -1.72
VPS8-215ENST00000460158 GZMKP49863 264 aa4.32□□□□□ -1.72
VPS8-215ENST00000460158 APBA1Q02410 837 aa4.32□□□□□ -1.72
VPS8-215ENST00000460158 DSC2Q02487 901 aa4.32□□□□□ -1.72
VPS8-215ENST00000460158 FOXL1Q12952 345 aa4.32□□□□□ -1.72
VPS8-215ENST00000460158 TARDBPQ13148 414 aaKnown RBP eCLIP4.32□□□□□ -1.72
VPS8-215ENST00000460158 MRPL49Q13405 166 aaKnown RBP4.32□□□□□ -1.72
VPS8-215ENST00000460158 GJC2Q5T442 439 aaPredicted RBP4.32□□□□□ -1.72
VPS8-215ENST00000460158 CXorf57Q6NSI4 855 aaKnown RBP4.32□□□□□ -1.72
VPS8-215ENST00000460158 CIR1Q86X95 450 aaPredicted RBP4.32□□□□□ -1.72
VPS8-215ENST00000460158 MAGEB6Q8N7X4 407 aa4.32□□□□□ -1.72
VPS8-215ENST00000460158 CHST13Q8NET6 341 aa4.32□□□□□ -1.72
VPS8-215ENST00000460158 HPS3Q969F9 1004 aa4.32□□□□□ -1.72
VPS8-215ENST00000460158 ARL8AQ96BM9 186 aa4.32□□□□□ -1.72
VPS8-215ENST00000460158 AIFM3Q96NN9 605 aa4.32□□□□□ -1.72
VPS8-215ENST00000460158 SORCS2Q96PQ0 1159 aa4.32□□□□□ -1.72
VPS8-215ENST00000460158 SENP6Q9GZR1 1112 aaPredicted RBP4.32□□□□□ -1.72
VPS8-215ENST00000460158 SLC12A5Q9H2X9 1139 aa4.32□□□□□ -1.72
VPS8-215ENST00000460158 LANCL2Q9NS86 450 aa4.32□□□□□ -1.72
VPS8-215ENST00000460158 AJAP1Q9UKB5 411 aaPredicted RBP4.32□□□□□ -1.72
VPS8-215ENST00000460158 RIPOR2Q9Y4F9 1068 aa4.32□□□□□ -1.72
VPS8-215ENST00000460158 PCDHB1Q9Y5F3 818 aa4.32□□□□□ -1.72
VPS8-215ENST00000460158 ATRNL1Q5VV63 1379 aa4.31□□□□□ -1.72
VPS8-215ENST00000460158 LOC102724159A0A0B4J2E5 919 aa4.31□□□□□ -1.72
VPS8-215ENST00000460158 DTNBO60941 627 aa4.31□□□□□ -1.72
VPS8-215ENST00000460158 RAD17O75943 681 aa4.31□□□□□ -1.72
VPS8-215ENST00000460158 FSHBP01225 129 aa4.31□□□□□ -1.72
VPS8-215ENST00000460158 FPR1P21462 350 aa4.31□□□□□ -1.72
VPS8-215ENST00000460158 PCSK1P29120 753 aa4.31□□□□□ -1.72
VPS8-215ENST00000460158 MSX2P35548 267 aaPredicted RBP4.31□□□□□ -1.72
VPS8-215ENST00000460158 GTF2H3Q13889 308 aa4.31□□□□□ -1.72
VPS8-215ENST00000460158 PWP2Q15269 919 aaKnown RBP4.31□□□□□ -1.72
VPS8-215ENST00000460158 ATAT1Q5SQI0 421 aa4.31□□□□□ -1.72
VPS8-215ENST00000460158 MFSD14BQ5SR56 506 aa4.31□□□□□ -1.72
VPS8-215ENST00000460158 FKBP15Q5T1M5 1219 aa4.31□□□□□ -1.72
VPS8-215ENST00000460158 GORABQ5T7V8 394 aa4.31□□□□□ -1.72
VPS8-215ENST00000460158 B3GNT9Q6UX72 402 aa4.31□□□□□ -1.72
VPS8-215ENST00000460158 PDZD4Q76G19 769 aaPredicted RBP4.31□□□□□ -1.72
VPS8-215ENST00000460158 ZNF572Q7Z3I7 529 aaPredicted RBP4.31□□□□□ -1.72
VPS8-215ENST00000460158 GRAMD1CQ8IYS0 662 aa4.31□□□□□ -1.72
VPS8-215ENST00000460158 TTC8Q8TAM2 541 aa4.31□□□□□ -1.72
VPS8-215ENST00000460158 SLC35G2Q8TBE7 412 aa4.31□□□□□ -1.72
VPS8-215ENST00000460158 MVB12AQ96EY5 273 aa4.31□□□□□ -1.72
VPS8-215ENST00000460158 ZNF512Q96ME7 567 aaPredicted RBP4.31□□□□□ -1.72
VPS8-215ENST00000460158 DMRTA2Q96SC8 542 aa4.31□□□□□ -1.72
VPS8-215ENST00000460158 EPC1Q9H2F5 836 aa4.31□□□□□ -1.72
VPS8-215ENST00000460158 MANSC1Q9H8J5 431 aa4.31□□□□□ -1.72
VPS8-215ENST00000460158 NMRK2Q9NPI5 230 aa4.31□□□□□ -1.72
VPS8-215ENST00000460158 TDP1Q9NUW8 608 aa4.31□□□□□ -1.72
VPS8-215ENST00000460158 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.31□□□□□ -1.72
VPS8-215ENST00000460158 SH3BP1Q9Y3L3 701 aa4.31□□□□□ -1.72
VPS8-215ENST00000460158 ACTL7AQ9Y615 435 aa4.31□□□□□ -1.72
VPS8-215ENST00000460158 SLC30A1Q9Y6M5 507 aa4.31□□□□□ -1.72
VPS8-215ENST00000460158 MYBBP1AQ9BQG0 1328 aaKnown RBP4.3□□□□□ -1.72
VPS8-215ENST00000460158 PATE3B3GLJ2 98 aa4.3□□□□□ -1.72
VPS8-215ENST00000460158 U2AF1L5P0DN76 240 aaPredicted RBP4.3□□□□□ -1.72
VPS8-215ENST00000460158 ALOX15P16050 662 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms