RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 FBXO18Q8NFZ0 1043 aa6.89□□□□□ -1.31
CCDC50-203ENST00000460064 MBD6Q96DN6 1003 aa6.89□□□□□ -1.31
CCDC50-203ENST00000460064 MRGPRX4Q96LA9 322 aa6.89□□□□□ -1.31
CCDC50-203ENST00000460064 CDC5LQ99459 802 aaKnown RBP6.89□□□□□ -1.31
CCDC50-203ENST00000460064 LMBRD1Q9NUN5 540 aa6.89□□□□□ -1.31
CCDC50-203ENST00000460064 TMEM140Q9NV12 185 aa6.89□□□□□ -1.31
CCDC50-203ENST00000460064 AJAP1Q9UKB5 411 aaPredicted RBP6.89□□□□□ -1.31
CCDC50-203ENST00000460064 NR2E1Q9Y466 385 aa6.89□□□□□ -1.31
CCDC50-203ENST00000460064 A0A088AWK7 358 aa6.88□□□□□ -1.31
CCDC50-203ENST00000460064 CFAP69A5D8W1 941 aa6.88□□□□□ -1.31
CCDC50-203ENST00000460064 PMM2O15305 246 aa6.88□□□□□ -1.31
CCDC50-203ENST00000460064 ARHGAP6O43182 974 aa6.88□□□□□ -1.31
CCDC50-203ENST00000460064 MTSS1O43312 755 aa6.88□□□□□ -1.31
CCDC50-203ENST00000460064 TPD52L2O43399 206 aaKnown RBP6.88□□□□□ -1.31
CCDC50-203ENST00000460064 NUAK1O60285 661 aa6.88□□□□□ -1.31
CCDC50-203ENST00000460064 DDCP20711 480 aa6.88□□□□□ -1.31
CCDC50-203ENST00000460064 SMARCA1P28370 1054 aa6.88□□□□□ -1.31
CCDC50-203ENST00000460064 CASRP41180 1078 aa6.88□□□□□ -1.31
CCDC50-203ENST00000460064 CACNB3P54284 484 aa6.88□□□□□ -1.31
CCDC50-203ENST00000460064 RAB39AQ14964 217 aa6.88□□□□□ -1.31
CCDC50-203ENST00000460064 CNN3Q15417 329 aaKnown RBP6.88□□□□□ -1.31
CCDC50-203ENST00000460064 GAGE13Q4V321 117 aa6.88□□□□□ -1.31
CCDC50-203ENST00000460064 HEATR3Q7Z4Q2 680 aa6.88□□□□□ -1.31
CCDC50-203ENST00000460064 C11orf96Q7Z7L8 435 aa6.88□□□□□ -1.31
CCDC50-203ENST00000460064 CMTM4Q8IZR5 234 aa6.88□□□□□ -1.31
CCDC50-203ENST00000460064 ZGPATQ8N5A5 531 aaKnown RBP6.88□□□□□ -1.31
CCDC50-203ENST00000460064 MDM1Q8TC05 714 aa6.88□□□□□ -1.31
CCDC50-203ENST00000460064 BHMT2Q9H2M3 363 aa6.88□□□□□ -1.31
CCDC50-203ENST00000460064 JADE2Q9NQC1 790 aa6.88□□□□□ -1.31
CCDC50-203ENST00000460064 PNPOQ9NVS9 261 aa6.88□□□□□ -1.31
CCDC50-203ENST00000460064 CALCOCO1Q9P1Z2 691 aa6.88□□□□□ -1.31
CCDC50-203ENST00000460064 PCDHGB6Q9Y5F9 930 aa6.88□□□□□ -1.31
CCDC50-203ENST00000460064 GOLIM4O00461 696 aa6.87□□□□□ -1.31
CCDC50-203ENST00000460064 NRP1O14786 923 aa6.87□□□□□ -1.31
CCDC50-203ENST00000460064 PQBP1O60828 265 aaKnown RBP6.87□□□□□ -1.31
CCDC50-203ENST00000460064 GPR32O75388 356 aa6.87□□□□□ -1.31
CCDC50-203ENST00000460064 SASH1O94885 1247 aa6.87□□□□□ -1.31
CCDC50-203ENST00000460064 ARIH2O95376 493 aa6.87□□□□□ -1.31
CCDC50-203ENST00000460064 IL2RBP14784 551 aa6.87□□□□□ -1.31
CCDC50-203ENST00000460064 SLURP1P55000 103 aa6.87□□□□□ -1.31
CCDC50-203ENST00000460064 GPSM2P81274 684 aa6.87□□□□□ -1.31
CCDC50-203ENST00000460064 APBA1Q02410 837 aa6.87□□□□□ -1.31
CCDC50-203ENST00000460064 HGFACQ04756 655 aa6.87□□□□□ -1.31
CCDC50-203ENST00000460064 SNAPC2Q13487 334 aa6.87□□□□□ -1.31
CCDC50-203ENST00000460064 FGL2Q14314 439 aa6.87□□□□□ -1.31
CCDC50-203ENST00000460064 PKN1Q16512 942 aa6.87□□□□□ -1.31
CCDC50-203ENST00000460064 RNF151Q2KHN1 245 aa6.87□□□□□ -1.31
CCDC50-203ENST00000460064 TCERG1LQ5VWI1 586 aa6.87□□□□□ -1.31
CCDC50-203ENST00000460064 PDZD4Q76G19 769 aaPredicted RBP6.87□□□□□ -1.31
CCDC50-203ENST00000460064 MAEAQ7L5Y9 396 aa6.87□□□□□ -1.31
CCDC50-203ENST00000460064 TRMT2AQ8IZ69 625 aaKnown RBP6.87□□□□□ -1.31
CCDC50-203ENST00000460064 PLBD2Q8NHP8 589 aa6.87□□□□□ -1.31
CCDC50-203ENST00000460064 IFI44Q8TCB0 444 aa6.87□□□□□ -1.31
CCDC50-203ENST00000460064 SLC35A4Q96G79 324 aa6.87□□□□□ -1.31
CCDC50-203ENST00000460064 SLC39A13Q96H72 371 aa6.87□□□□□ -1.31
CCDC50-203ENST00000460064 ABCF2Q9UG63 623 aa6.87□□□□□ -1.31
CCDC50-203ENST00000460064 PUF60Q9UHX1 559 aaKnown RBP6.87□□□□□ -1.31
CCDC50-203ENST00000460064 PAX4O43316 350 aa6.86□□□□□ -1.31
CCDC50-203ENST00000460064 MYL3P08590 195 aa6.86□□□□□ -1.31
CCDC50-203ENST00000460064 MALP21145 153 aa6.86□□□□□ -1.31
CCDC50-203ENST00000460064 NPEPPSP55786 919 aa6.86□□□□□ -1.31
CCDC50-203ENST00000460064 ZNF280AP59817 542 aaPredicted RBP6.86□□□□□ -1.31
CCDC50-203ENST00000460064 NKX6-1P78426 367 aaPredicted RBP6.86□□□□□ -1.31
CCDC50-203ENST00000460064 SEMA5AQ13591 1074 aa6.86□□□□□ -1.31
CCDC50-203ENST00000460064 NFYCQ13952 458 aa6.86□□□□□ -1.31
CCDC50-203ENST00000460064 PLS1Q14651 629 aa6.86□□□□□ -1.31
CCDC50-203ENST00000460064 PRAMEF14Q5SWL7 426 aa6.86□□□□□ -1.31
CCDC50-203ENST00000460064 PARD3BQ8TEW8 1205 aa6.86□□□□□ -1.31
CCDC50-203ENST00000460064 RABGGTAQ92696 567 aa6.86□□□□□ -1.31
CCDC50-203ENST00000460064 FAM167AQ96KS9 214 aa6.86□□□□□ -1.31
CCDC50-203ENST00000460064 SAMD11Q96NU1 681 aa6.86□□□□□ -1.31
CCDC50-203ENST00000460064 GPHA2Q96T91 129 aa6.86□□□□□ -1.31
CCDC50-203ENST00000460064 NAA15Q9BXJ9 866 aaKnown RBP6.86□□□□□ -1.31
CCDC50-203ENST00000460064 CHMP4AQ9BY43 222 aa6.86□□□□□ -1.31
CCDC50-203ENST00000460064 C12orf65Q9H3J6 166 aaKnown RBP6.86□□□□□ -1.31
CCDC50-203ENST00000460064 ACTL7AQ9Y615 435 aa6.86□□□□□ -1.31
CCDC50-203ENST00000460064 COMMD10Q9Y6G5 202 aa6.86□□□□□ -1.31
CCDC50-203ENST00000460064 ZMYM3Q14202 1370 aa6.85□□□□□ -1.31
CCDC50-203ENST00000460064 MGEA5O60502 916 aa6.85□□□□□ -1.31
CCDC50-203ENST00000460064 TYRP14679 529 aa6.85□□□□□ -1.31
CCDC50-203ENST00000460064 FPR1P21462 350 aa6.85□□□□□ -1.31
CCDC50-203ENST00000460064 PCSK1P29120 753 aa6.85□□□□□ -1.31
CCDC50-203ENST00000460064 GUCY1A2P33402 732 aa6.85□□□□□ -1.31
CCDC50-203ENST00000460064 KCNC1P48547 511 aa6.85□□□□□ -1.31
CCDC50-203ENST00000460064 RAB1AP62820 205 aa6.85□□□□□ -1.31
CCDC50-203ENST00000460064 ATP8B2P98198 1209 aa6.85□□□□□ -1.31
CCDC50-203ENST00000460064 TLE1Q04724 770 aa6.85□□□□□ -1.31
CCDC50-203ENST00000460064 CIAPIN1Q6FI81 312 aa6.85□□□□□ -1.31
CCDC50-203ENST00000460064 COL23A1Q86Y22 540 aaPredicted RBP6.85□□□□□ -1.31
CCDC50-203ENST00000460064 LRTOMTQ8WZ04 291 aa6.85□□□□□ -1.31
CCDC50-203ENST00000460064 MTFMTQ96DP5 389 aaKnown RBP6.85□□□□□ -1.31
CCDC50-203ENST00000460064 TNIP3Q96KP6 325 aa6.85□□□□□ -1.31
CCDC50-203ENST00000460064 NT5C1BQ96P26 610 aa6.85□□□□□ -1.31
CCDC50-203ENST00000460064 APOL5Q9BWW9 433 aa6.85□□□□□ -1.31
CCDC50-203ENST00000460064 EPC1Q9H2F5 836 aa6.85□□□□□ -1.31
CCDC50-203ENST00000460064 MOCS1Q9NZB8 636 aa6.85□□□□□ -1.31
CCDC50-203ENST00000460064 STAP2Q9UGK3 403 aa6.85□□□□□ -1.31
CCDC50-203ENST00000460064 SLC4A7Q9Y6M7 1214 aa6.85□□□□□ -1.31
CCDC50-203ENST00000460064 UBE2QL1A1L167 161 aa6.84□□□□□ -1.31
CCDC50-203ENST00000460064 RAP2AP10114 183 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms