RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 RHOBTB2Q9BYZ6 727 aa8.79□□□□□ -1
HPS4-207ENST00000459918 NXF3Q9H4D5 531 aaKnown RBP8.79□□□□□ -1
HPS4-207ENST00000459918 MINDY3Q9H8M7 445 aa8.79□□□□□ -1
HPS4-207ENST00000459918 RXFP1Q9HBX9 757 aa8.79□□□□□ -1
HPS4-207ENST00000459918 FAM217BQ9NTX9 383 aaPredicted RBP8.79□□□□□ -1
HPS4-207ENST00000459918 ZSCAN32Q9NX65 697 aa8.79□□□□□ -1
HPS4-207ENST00000459918 DDX25Q9UHL0 483 aaKnown RBP8.79□□□□□ -1
HPS4-207ENST00000459918 MRPS17Q9Y2R5 130 aaKnown RBP8.79□□□□□ -1
HPS4-207ENST00000459918 CPLX1O14810 134 aa8.78□□□□□ -1
HPS4-207ENST00000459918 TSPAN1O60635 241 aa8.78□□□□□ -1
HPS4-207ENST00000459918 AKAP5P24588 427 aa8.78□□□□□ -1
HPS4-207ENST00000459918 AXLP30530 894 aa8.78□□□□□ -1
HPS4-207ENST00000459918 YWHABP31946 246 aaKnown RBP8.78□□□□□ -1
HPS4-207ENST00000459918 MAGEA9P43362 315 aa8.78□□□□□ -1
HPS4-207ENST00000459918 CCT2P78371 535 aaKnown RBP8.78□□□□□ -1
HPS4-207ENST00000459918 GRIK3Q13003 919 aa8.78□□□□□ -1
HPS4-207ENST00000459918 HSP90AA2PQ14568 343 aaPredicted RBP8.78□□□□□ -1
HPS4-207ENST00000459918 PSMD5Q16401 504 aa8.78□□□□□ -1
HPS4-207ENST00000459918 PABPC1LQ4VXU2 614 aaKnown RBP8.78□□□□□ -1
HPS4-207ENST00000459918 NCAPH2Q6IBW4 605 aa8.78□□□□□ -1
HPS4-207ENST00000459918 PPP4R3AQ6IN85 833 aa8.78□□□□□ -1
HPS4-207ENST00000459918 BLOC1S2Q6QNY1 142 aa8.78□□□□□ -1
HPS4-207ENST00000459918 SMG8Q8ND04 991 aaKnown RBP8.78□□□□□ -1
HPS4-207ENST00000459918 SLC7A14Q8TBB6 771 aa8.78□□□□□ -1
HPS4-207ENST00000459918 CCDC51Q96ER9 411 aa8.78□□□□□ -1
HPS4-207ENST00000459918 BORCS6Q96GS4 357 aa8.78□□□□□ -1
HPS4-207ENST00000459918 LXNQ9BS40 222 aa8.78□□□□□ -1
HPS4-207ENST00000459918 RTKNQ9BST9 563 aa8.78□□□□□ -1
HPS4-207ENST00000459918 RNF26Q9BY78 433 aaPredicted RBP8.78□□□□□ -1
HPS4-207ENST00000459918 GPR62Q9BZJ7 368 aa8.78□□□□□ -1
HPS4-207ENST00000459918 CSRNP2Q9H175 543 aa8.78□□□□□ -1
HPS4-207ENST00000459918 LTB4R2Q9NPC1 389 aa8.78□□□□□ -1
HPS4-207ENST00000459918 KLK14Q9P0G3 267 aa8.78□□□□□ -1
HPS4-207ENST00000459918 FNIP2Q9P278 1114 aa8.78□□□□□ -1
HPS4-207ENST00000459918 NDRG2Q9UN36 371 aaKnown RBP8.78□□□□□ -1
HPS4-207ENST00000459918 PCDHA4Q9UN74 947 aa8.78□□□□□ -1
HPS4-207ENST00000459918 MTF2Q9Y483 593 aaPredicted RBP8.78□□□□□ -1
HPS4-207ENST00000459918 RALGAPA1Q6GYQ0 2036 aa8.77□□□□□ -1.01
HPS4-207ENST00000459918 DOCK6Q96HP0 2047 aa8.77□□□□□ -1.01
HPS4-207ENST00000459918 CASTOR2A6NHX0 329 aa8.77□□□□□ -1.01
HPS4-207ENST00000459918 ASAP2O43150 1006 aa8.77□□□□□ -1.01
HPS4-207ENST00000459918 NPTXRO95502 500 aa8.77□□□□□ -1.01
HPS4-207ENST00000459918 P4HBP07237 508 aaKnown RBP8.77□□□□□ -1.01
HPS4-207ENST00000459918 HNRNPA1P09651 372 aaKnown RBP eCLIP8.77□□□□□ -1.01
HPS4-207ENST00000459918 HOXA11P31270 313 aaPredicted RBP8.77□□□□□ -1.01
HPS4-207ENST00000459918 CYP4A11Q02928 519 aa8.77□□□□□ -1.01
HPS4-207ENST00000459918 DSC1Q08554 894 aa8.77□□□□□ -1.01
HPS4-207ENST00000459918 SSRP1Q08945 709 aaKnown RBP8.77□□□□□ -1.01
HPS4-207ENST00000459918 SPEM2Q0P670 501 aa8.77□□□□□ -1.01
HPS4-207ENST00000459918 MXD4Q14582 209 aaPredicted RBP8.77□□□□□ -1.01
HPS4-207ENST00000459918 PCBP1Q15365 356 aaKnown RBP eCLIP8.77□□□□□ -1.01
HPS4-207ENST00000459918 RTP2Q5QGT7 225 aa8.77□□□□□ -1.01
HPS4-207ENST00000459918 FAM171A1Q5VUB5 890 aa8.77□□□□□ -1.01
HPS4-207ENST00000459918 ZNF852Q6ZMS4 543 aa8.77□□□□□ -1.01
HPS4-207ENST00000459918 FERMT3Q86UX7 667 aa8.77□□□□□ -1.01
HPS4-207ENST00000459918 CDR2LQ86X02 465 aaPredicted RBP8.77□□□□□ -1.01
HPS4-207ENST00000459918 RNF168Q8IYW5 571 aaPredicted RBP8.77□□□□□ -1.01
HPS4-207ENST00000459918 MAML2Q8IZL2 1156 aaPredicted RBP8.77□□□□□ -1.01
HPS4-207ENST00000459918 BLIDQ8IZY5 108 aa8.77□□□□□ -1.01
HPS4-207ENST00000459918 CEP89Q96ST8 783 aa8.77□□□□□ -1.01
HPS4-207ENST00000459918 NELL2Q99435 816 aa8.77□□□□□ -1.01
HPS4-207ENST00000459918 TTPALQ9BTX7 342 aa8.77□□□□□ -1.01
HPS4-207ENST00000459918 EPC1Q9H2F5 836 aa8.77□□□□□ -1.01
HPS4-207ENST00000459918 SH3GLB2Q9NR46 395 aa8.77□□□□□ -1.01
HPS4-207ENST00000459918 HEBP1Q9NRV9 189 aa8.77□□□□□ -1.01
HPS4-207ENST00000459918 CHST7Q9NS84 486 aa8.77□□□□□ -1.01
HPS4-207ENST00000459918 CACNG4Q9UBN1 327 aa8.77□□□□□ -1.01
HPS4-207ENST00000459918 FBXW11Q9UKB1 542 aa8.77□□□□□ -1.01
HPS4-207ENST00000459918 GIT1Q9Y2X7 761 aa8.77□□□□□ -1.01
HPS4-207ENST00000459918 MRPS23Q9Y3D9 190 aaKnown RBP8.77□□□□□ -1.01
HPS4-207ENST00000459918 PPME1Q9Y570 386 aa8.77□□□□□ -1.01
HPS4-207ENST00000459918 TICRRQ7Z2Z1 1910 aa8.77□□□□□ -1.01
HPS4-207ENST00000459918 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.76□□□□□ -1.01
HPS4-207ENST00000459918 CCDC194A0A1B0GVG4 234 aa8.76□□□□□ -1.01
HPS4-207ENST00000459918 EML1O00423 815 aa8.76□□□□□ -1.01
HPS4-207ENST00000459918 TBC1D4O60343 1298 aa8.76□□□□□ -1.01
HPS4-207ENST00000459918 CCNT1O60563 726 aaKnown RBP8.76□□□□□ -1.01
HPS4-207ENST00000459918 STBD1O95210 358 aa8.76□□□□□ -1.01
HPS4-207ENST00000459918 C1RP00736 705 aa8.76□□□□□ -1.01
HPS4-207ENST00000459918 TARSP26639 723 aaKnown RBP8.76□□□□□ -1.01
HPS4-207ENST00000459918 NRLP54845 237 aa8.76□□□□□ -1.01
HPS4-207ENST00000459918 DMWDQ09019 674 aa8.76□□□□□ -1.01
HPS4-207ENST00000459918 TUSC3Q13454 348 aa8.76□□□□□ -1.01
HPS4-207ENST00000459918 INF2Q27J81 1249 aa8.76□□□□□ -1.01
HPS4-207ENST00000459918 PPM1JQ5JR12 505 aa8.76□□□□□ -1.01
HPS4-207ENST00000459918 AXDND1Q5T1B0 1012 aaPredicted RBP8.76□□□□□ -1.01
HPS4-207ENST00000459918 PDXDC1Q6P996 788 aa8.76□□□□□ -1.01
HPS4-207ENST00000459918 SLC27A1Q6PCB7 646 aa8.76□□□□□ -1.01
HPS4-207ENST00000459918 RSPO2Q6UXX9 243 aaPredicted RBP8.76□□□□□ -1.01
HPS4-207ENST00000459918 KRT25Q7Z3Z0 450 aa8.76□□□□□ -1.01
HPS4-207ENST00000459918 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.76□□□□□ -1.01
HPS4-207ENST00000459918 TPH2Q8IWU9 490 aa8.76□□□□□ -1.01
HPS4-207ENST00000459918 ITFG1Q8TB96 612 aa8.76□□□□□ -1.01
HPS4-207ENST00000459918 ETNPPLQ8TBG4 499 aa8.76□□□□□ -1.01
HPS4-207ENST00000459918 MCRS1Q96EZ8 462 aa8.76□□□□□ -1.01
HPS4-207ENST00000459918 OSBPL6Q9BZF3 934 aa8.76□□□□□ -1.01
HPS4-207ENST00000459918 OCEL1Q9H607 264 aa8.76□□□□□ -1.01
HPS4-207ENST00000459918 DHX33Q9H6R0 707 aaKnown RBP8.76□□□□□ -1.01
HPS4-207ENST00000459918 NCOA5Q9HCD5 579 aaKnown RBP8.76□□□□□ -1.01
HPS4-207ENST00000459918 HCFC1R1Q9NWW0 138 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms