RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 FRMD3A2A2Y4 597 aa23.81■■□□□ 1.4
SSNA1-202ENST00000459860 INPPL1O15357 1258 aa23.81■■□□□ 1.4
SSNA1-202ENST00000459860 CLDN3O15551 220 aa23.81■■□□□ 1.4
SSNA1-202ENST00000459860 FGF18O76093 207 aa23.81■■□□□ 1.4
SSNA1-202ENST00000459860 RECQL4O94761 1208 aa23.81■■□□□ 1.4
SSNA1-202ENST00000459860 ITGB1P05556 798 aa23.81■■□□□ 1.4
SSNA1-202ENST00000459860 SLFN14P0C7P3 912 aa23.81■■□□□ 1.4
SSNA1-202ENST00000459860 SCNN1GP51170 649 aa23.81■■□□□ 1.4
SSNA1-202ENST00000459860 YARSP54577 528 aaKnown RBP23.81■■□□□ 1.4
SSNA1-202ENST00000459860 BCAR1P56945 870 aa23.81■■□□□ 1.4
SSNA1-202ENST00000459860 GTF2BQ00403 316 aa23.81■■□□□ 1.4
SSNA1-202ENST00000459860 UBE3AQ05086 875 aa23.81■■□□□ 1.4
SSNA1-202ENST00000459860 ALCAMQ13740 583 aa23.81■■□□□ 1.4
SSNA1-202ENST00000459860 TIGD5Q53EQ6 642 aa23.81■■□□□ 1.4
SSNA1-202ENST00000459860 STXBP4Q6ZWJ1 553 aa23.81■■□□□ 1.4
SSNA1-202ENST00000459860 ZFP42Q96MM3 310 aa23.81■■□□□ 1.4
SSNA1-202ENST00000459860 FIZ1Q96SL8 496 aa23.81■■□□□ 1.4
SSNA1-202ENST00000459860 C7orf25Q9BPX7 421 aa23.81■■□□□ 1.4
SSNA1-202ENST00000459860 PTPRHQ9HD43 1115 aa23.81■■□□□ 1.4
SSNA1-202ENST00000459860 TOPORSQ9NS56 1045 aaPredicted RBP23.81■■□□□ 1.4
SSNA1-202ENST00000459860 SPG21Q9NZD8 308 aa23.81■■□□□ 1.4
SSNA1-202ENST00000459860 KLK14Q9P0G3 267 aa23.81■■□□□ 1.4
SSNA1-202ENST00000459860 SERTAD1Q9UHV2 236 aa23.81■■□□□ 1.4
SSNA1-202ENST00000459860 HPSEQ9Y251 543 aa23.81■■□□□ 1.4
SSNA1-202ENST00000459860 GDAQ9Y2T3 454 aa23.81■■□□□ 1.4
SSNA1-202ENST00000459860 TCF20Q9UGU0 1960 aaKnown RBP23.8■■□□□ 1.4
SSNA1-202ENST00000459860 CITO14578 2027 aa23.8■■□□□ 1.4
SSNA1-202ENST00000459860 GRM6O15303 877 aa23.8■■□□□ 1.4
SSNA1-202ENST00000459860 NR1I2O75469 434 aa23.8■■□□□ 1.4
SSNA1-202ENST00000459860 GCNT3O95395 438 aa23.8■■□□□ 1.4
SSNA1-202ENST00000459860 PROZP22891 400 aa23.8■■□□□ 1.4
SSNA1-202ENST00000459860 GRM5P41594 1212 aa23.8■■□□□ 1.4
SSNA1-202ENST00000459860 AFMP43652 599 aa23.8■■□□□ 1.4
SSNA1-202ENST00000459860 KRT17Q04695 432 aa23.8■■□□□ 1.4
SSNA1-202ENST00000459860 GRIK3Q13003 919 aa23.8■■□□□ 1.4
SSNA1-202ENST00000459860 CNNM4Q6P4Q7 775 aa23.8■■□□□ 1.4
SSNA1-202ENST00000459860 ZNF720Q7Z2F6 126 aa23.8■■□□□ 1.4
SSNA1-202ENST00000459860 MAP4K3Q8IVH8 894 aa23.8■■□□□ 1.4
SSNA1-202ENST00000459860 CCDC34Q96HJ3 373 aa23.8■■□□□ 1.4
SSNA1-202ENST00000459860 TMEM175Q9BSA9 504 aa23.8■■□□□ 1.4
SSNA1-202ENST00000459860 NRDE2Q9H7Z3 1164 aa23.8■■□□□ 1.4
SSNA1-202ENST00000459860 TBC1D7Q9P0N9 293 aa23.8■■□□□ 1.4
SSNA1-202ENST00000459860 PUF60Q9UHX1 559 aaKnown RBP23.8■■□□□ 1.4
SSNA1-202ENST00000459860 EXOC7Q9UPT5 735 aa23.8■■□□□ 1.4
SSNA1-202ENST00000459860 PCDHB13Q9Y5F0 798 aa23.8■■□□□ 1.4
SSNA1-202ENST00000459860 ATG2AQ2TAZ0 1938 aa23.79■■□□□ 1.4
SSNA1-202ENST00000459860 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.79■■□□□ 1.4
SSNA1-202ENST00000459860 PIGRP01833 764 aa23.79■■□□□ 1.4
SSNA1-202ENST00000459860 PBX3P40426 434 aa23.79■■□□□ 1.4
SSNA1-202ENST00000459860 NDUFA8P51970 172 aa23.79■■□□□ 1.4
SSNA1-202ENST00000459860 COASYQ13057 564 aa23.79■■□□□ 1.4
SSNA1-202ENST00000459860 LEXMQ3ZCV2 418 aa23.79■■□□□ 1.4
SSNA1-202ENST00000459860 ZC2HC1CQ53FD0 456 aaPredicted RBP23.79■■□□□ 1.4
SSNA1-202ENST00000459860 POF1BQ8WVV4 589 aa23.79■■□□□ 1.4
SSNA1-202ENST00000459860 TMEM169Q96HH4 297 aa23.79■■□□□ 1.4
SSNA1-202ENST00000459860 FAM237AA0A1B0GTK4 181 aa23.78■■□□□ 1.4
SSNA1-202ENST00000459860 ACTN4O43707 911 aaKnown RBP23.78■■□□□ 1.4
SSNA1-202ENST00000459860 CSPG5O95196 566 aa23.78■■□□□ 1.4
SSNA1-202ENST00000459860 AFF1P51825 1210 aaKnown RBP23.78■■□□□ 1.4
SSNA1-202ENST00000459860 PLCB3Q01970 1234 aa23.78■■□□□ 1.4
SSNA1-202ENST00000459860 ZNF280BQ86YH2 543 aa23.78■■□□□ 1.4
SSNA1-202ENST00000459860 SLC39A11Q8N1S5 342 aa23.78■■□□□ 1.4
SSNA1-202ENST00000459860 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.78■■□□□ 1.4
SSNA1-202ENST00000459860 SPPL3Q8TCT6 385 aa23.78■■□□□ 1.4
SSNA1-202ENST00000459860 LRFN3Q9BTN0 628 aa23.78■■□□□ 1.4
SSNA1-202ENST00000459860 C11orf16Q9NQ32 467 aa23.78■■□□□ 1.4
SSNA1-202ENST00000459860 LZTS1Q9Y250 596 aa23.78■■□□□ 1.4
SSNA1-202ENST00000459860 OSTNP61366 133 aa23.77■■□□□ 1.4
SSNA1-202ENST00000459860 MCL1Q07820 350 aa23.77■■□□□ 1.4
SSNA1-202ENST00000459860 KYAT1Q16773 422 aa23.77■■□□□ 1.4
SSNA1-202ENST00000459860 UNC13DQ70J99 1090 aa23.77■■□□□ 1.4
SSNA1-202ENST00000459860 CEP120Q8N960 986 aa23.77■■□□□ 1.4
SSNA1-202ENST00000459860 PPP2R3CQ969Q6 453 aa23.77■■□□□ 1.4
SSNA1-202ENST00000459860 ZBTB45Q96K62 511 aaPredicted RBP23.77■■□□□ 1.4
SSNA1-202ENST00000459860 ACAP3Q96P50 834 aa23.77■■□□□ 1.4
SSNA1-202ENST00000459860 ACCSQ96QU6 501 aa23.77■■□□□ 1.4
SSNA1-202ENST00000459860 BLZF1Q9H2G9 400 aa23.77■■□□□ 1.4
SSNA1-202ENST00000459860 TLR9Q9NR96 1032 aa23.77■■□□□ 1.4
SSNA1-202ENST00000459860 DNAJB4Q9UDY4 337 aa23.77■■□□□ 1.4
SSNA1-202ENST00000459860 TRIP11Q15643 1979 aa23.76■■□□□ 1.39
SSNA1-202ENST00000459860 NT5C1B-RDH14C9J2C7 533 aa23.76■■□□□ 1.39
SSNA1-202ENST00000459860 ABLIM1O14639 778 aa23.76■■□□□ 1.39
SSNA1-202ENST00000459860 DDHD2O94830 711 aa23.76■■□□□ 1.39
SSNA1-202ENST00000459860 ALDH2P05091 517 aa23.76■■□□□ 1.39
SSNA1-202ENST00000459860 MYL1P05976 194 aa23.76■■□□□ 1.39
SSNA1-202ENST00000459860 THP07101 528 aa23.76■■□□□ 1.39
SSNA1-202ENST00000459860 GALTP07902 379 aa23.76■■□□□ 1.39
SSNA1-202ENST00000459860 KCNA5P22460 613 aa23.76■■□□□ 1.39
SSNA1-202ENST00000459860 PLA2G5P39877 138 aa23.76■■□□□ 1.39
SSNA1-202ENST00000459860 OR1G1P47890 313 aa23.76■■□□□ 1.39
SSNA1-202ENST00000459860 SLC11A1P49279 550 aa23.76■■□□□ 1.39
SSNA1-202ENST00000459860 L1TD1Q5T7N2 865 aaKnown RBP23.76■■□□□ 1.39
SSNA1-202ENST00000459860 SYCP3Q8IZU3 236 aa23.76■■□□□ 1.39
SSNA1-202ENST00000459860 NSUN3Q9H649 340 aaKnown RBP23.76■■□□□ 1.39
SSNA1-202ENST00000459860 MIOSQ9NXC5 875 aa23.76■■□□□ 1.39
SSNA1-202ENST00000459860 FAN1Q9Y2M0 1017 aa23.76■■□□□ 1.39
SSNA1-202ENST00000459860 PPP1R37O75864 691 aa23.75■■□□□ 1.39
SSNA1-202ENST00000459860 CUL4BQ13620 913 aa23.75■■□□□ 1.39
SSNA1-202ENST00000459860 BMS1Q14692 1282 aaKnown RBP23.75■■□□□ 1.39
SSNA1-202ENST00000459860 FAM26FQ5R3K3 315 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms