RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 DEFB118Q96PH6 123 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 RPS6KC1Q96S38 1066 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 CBWD1Q9BRT8 395 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 LSM14BQ9BX40 385 aaKnown RBP6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 STRA6Q9BX79 667 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 FZD8Q9H461 694 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 ASB7Q9H672 318 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 PLEKHA5Q9HAU0 1116 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 TMEM8AQ9HCN3 771 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 UBN1Q9NPG3 1134 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 DMAC2Q9NW81 257 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 PRKAG2Q9UGJ0 569 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 PARP2Q9UGN5 583 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 MYO6Q9UM54 1294 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 CAPN11Q9UMQ6 739 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 PIN4Q9Y237 131 aaKnown RBP6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 ZKSCAN5Q9Y2L8 839 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 SQORQ9Y6N5 450 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 SIP14410 1827 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 CNTNAP2Q9UHC6 1331 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 ARHGEF37A1IGU5 675 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 ESPNB1AK53 854 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 ZBTB42B2RXF5 422 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 ANKRD63C9JTQ0 380 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 TEX33O43247 280 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 KRT86O43790 486 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 ADAMTS4O75173 837 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 CD4P01730 458 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 CCL5P13501 91 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 DARSP14868 501 aaKnown RBP6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 FERP16591 822 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 CASP4P49662 377 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 NAP1L1P55209 391 aaKnown RBP6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 OSTNP61366 133 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 TFAMQ00059 246 aaKnown RBP6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 MBTD1Q05BQ5 628 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 MCL1Q07820 350 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 KLHL30Q0D2K2 578 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 PSMD6Q15008 389 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 SNX17Q15036 470 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 ASIC2Q16515 512 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 SGSM1Q2NKQ1 1148 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 ARHGAP29Q52LW3 1261 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 TMEM63BQ5T3F8 832 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 MAP3K21Q5TCX8 1036 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 PPP1R2P3Q6NXS1 205 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 ZC3H3Q8IXZ2 948 aaKnown RBP6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 CCDC170Q8IYT3 715 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 PPM1KQ8N3J5 372 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 EHBP1Q8NDI1 1231 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 KLHDC9Q8NEP7 349 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 TRPV1Q8NER1 839 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 BEST2Q8NFU1 509 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 PARD3BQ8TEW8 1205 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 SH3TC2Q8TF17 1288 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 TAF4BQ92750 862 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 SYN2Q92777 582 aaPredicted RBP6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 KAT2BQ92831 832 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 SLC35C1Q96A29 364 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 LENG1Q96BZ8 264 aaPredicted RBP6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 ZNF668Q96K58 619 aaPredicted RBP6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 MFSD14AQ96MC6 490 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 FAM193BQ96PV7 902 aaPredicted RBP6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 FIZ1Q96SL8 496 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 OSMRQ99650 979 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 CRACR2AQ9BSW2 395 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 FTHL17Q9BXU8 183 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 SENP6Q9GZR1 1112 aaPredicted RBP6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 IFT122Q9HBG6 1241 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 NLRC4Q9NPP4 1024 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 PLCB1Q9NQ66 1216 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 ABHD10Q9NUJ1 306 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 SLC38A7Q9NVC3 462 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 LRFN2Q9ULH4 789 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 TELO2Q9Y4R8 837 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 CDY2AQ9Y6F7 541 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 STYXL1Q9Y6J8 313 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 THSD7BQ9C0I4 1608 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 SCN10AQ9Y5Y9 1956 aa6.31□□□□□ -1.4
RNU1-88P-201ENST00000459274 A0A1B0GUA9 196 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 A0A1W2PQ45 241 aaPredicted RBP6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 A0A1W2PQY0 241 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 ARVCFO00192 962 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 PMM2O15305 246 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 ADCY6O43306 1168 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 MFAP3LO75121 409 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 NPTXRO95502 500 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 SERPING1P05155 500 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 STAG3L1P0CL83 205 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 ITGA4P13612 1032 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 DESP17661 470 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 ARF4P18085 180 aaPredicted RBP6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 TNFAIP3P21580 790 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 PON1P27169 355 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 HOXD13P35453 343 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 GCLMP48507 274 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 SNX16P57768 344 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 TNNC1P63316 161 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 ARID5AQ03989 594 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms