RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 CDCA2Q69YH5 1023 aaPredicted RBP9.73□□□□□ -0.85
VPS50-207ENST00000458530 CYP26C1Q6V0L0 522 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 ZPBP2Q6X784 338 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 GBP6Q6ZN66 633 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 CACNA2D4Q7Z3S7 1137 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 APBB1IPQ7Z5R6 666 aaPredicted RBP9.73□□□□□ -0.85
VPS50-207ENST00000458530 TMTC1Q8IUR5 882 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 TC2NQ8N9U0 490 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 OR8K1Q8NGG5 319 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 ASAP3Q8TDY4 903 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 POMGNT1Q8WZA1 660 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 VTI1AQ96AJ9 217 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 EPAS1Q99814 870 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 MRPL4Q9BYD3 311 aaKnown RBP9.73□□□□□ -0.85
VPS50-207ENST00000458530 MMRN2Q9H8L6 949 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 SUGCTQ9HAC7 445 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 ABHD10Q9NUJ1 306 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 CEP72Q9P209 647 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 SUCLA2Q9P2R7 463 aaPredicted RBP9.73□□□□□ -0.85
VPS50-207ENST00000458530 THEGQ9P2T0 379 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 GNEQ9Y223 722 aaKnown RBP9.73□□□□□ -0.85
VPS50-207ENST00000458530 SIK3Q9Y2K2 1263 aa9.73□□□□□ -0.85
VPS50-207ENST00000458530 ZBTB42B2RXF5 422 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 KIF2AO00139 706 aaPredicted RBP9.72□□□□□ -0.85
VPS50-207ENST00000458530 DYNC1LI2O43237 492 aaPredicted RBP9.72□□□□□ -0.85
VPS50-207ENST00000458530 DUSP11O75319 330 aaKnown RBP9.72□□□□□ -0.85
VPS50-207ENST00000458530 IPO7O95373 1038 aaKnown RBP9.72□□□□□ -0.85
VPS50-207ENST00000458530 C22orf31O95567 290 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 F2P00734 622 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 GNAT1P11488 350 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 INSRRP14616 1297 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 MATR3P43243 847 aaKnown RBP eCLIP9.72□□□□□ -0.85
VPS50-207ENST00000458530 ADKP55263 362 aaKnown RBP9.72□□□□□ -0.85
VPS50-207ENST00000458530 MRPS5P82675 430 aaKnown RBP9.72□□□□□ -0.85
VPS50-207ENST00000458530 MYL7Q01449 175 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 FPGSQ05932 587 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 FAAP100Q0VG06 881 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 LAMTOR4Q0VGL1 99 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 ADGRE1Q14246 886 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 GRIK4Q16099 956 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 EXOC3L4Q17RC7 722 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 EFCAB12Q6NXP0 572 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 C16orf59Q7L2K0 433 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 KSR1Q8IVT5 923 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 GPD1LQ8N335 351 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 METTL13Q8N6R0 699 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 CPLX3Q8WVH0 158 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 SLC35C1Q96A29 364 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 TIFAQ96CG3 184 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 UHRF1Q96T88 793 aaPredicted RBP9.72□□□□□ -0.85
VPS50-207ENST00000458530 DNAJC7Q99615 494 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 C16orf70Q9BSU1 422 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 KIFC3Q9BVG8 833 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 NFKBIZQ9BYH8 718 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 TMX1Q9H3N1 280 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 PLCB1Q9NQ66 1216 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 KCND1Q9NSA2 647 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 TBX21Q9UL17 535 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 MYO9BQ13459 2157 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 ADGRA3Q8IWK6 1321 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 NRCAMQ92823 1304 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 CITO14578 2027 aa9.72□□□□□ -0.85
VPS50-207ENST00000458530 MUC6Q6W4X9 2439 aa9.71□□□□□ -0.85
VPS50-207ENST00000458530 RALGAPA2Q2PPJ7 1873 aa9.71□□□□□ -0.85
VPS50-207ENST00000458530 TTC26A0AVF1 554 aa9.71□□□□□ -0.86
VPS50-207ENST00000458530 TUBB4AP04350 444 aa9.71□□□□□ -0.86
VPS50-207ENST00000458530 RPLP2P05387 115 aaKnown RBP9.71□□□□□ -0.86
VPS50-207ENST00000458530 PRKCBP05771 671 aa9.71□□□□□ -0.86
VPS50-207ENST00000458530 FECHP22830 423 aa9.71□□□□□ -0.86
VPS50-207ENST00000458530 GTF2H1P32780 548 aa9.71□□□□□ -0.86
VPS50-207ENST00000458530 CLCN1P35523 988 aa9.71□□□□□ -0.86
VPS50-207ENST00000458530 CASP4P49662 377 aa9.71□□□□□ -0.86
VPS50-207ENST00000458530 VAMP7P51809 220 aa9.71□□□□□ -0.86
VPS50-207ENST00000458530 PTPN5P54829 565 aa9.71□□□□□ -0.86
VPS50-207ENST00000458530 ARID5BQ14865 1188 aa9.71□□□□□ -0.86
VPS50-207ENST00000458530 NOLC1Q14978 699 aaKnown RBP eCLIP9.71□□□□□ -0.86
VPS50-207ENST00000458530 SNRNP35Q16560 246 aaKnown RBP9.71□□□□□ -0.86
VPS50-207ENST00000458530 FSCN1Q16658 493 aaKnown RBP9.71□□□□□ -0.86
VPS50-207ENST00000458530 TMEM132AQ24JP5 1023 aa9.71□□□□□ -0.86
VPS50-207ENST00000458530 CCSAPQ6IQ19 270 aaPredicted RBP9.71□□□□□ -0.86
VPS50-207ENST00000458530 ZNF410Q86VK4 478 aa9.71□□□□□ -0.86
VPS50-207ENST00000458530 RHPN2Q8IUC4 686 aa9.71□□□□□ -0.86
VPS50-207ENST00000458530 TXLNBQ8N3L3 684 aa9.71□□□□□ -0.86
VPS50-207ENST00000458530 RNF149Q8NC42 400 aa9.71□□□□□ -0.86
VPS50-207ENST00000458530 PRPF31Q8WWY3 499 aaKnown RBP9.71□□□□□ -0.86
VPS50-207ENST00000458530 PRIMPOLQ96LW4 560 aa9.71□□□□□ -0.86
VPS50-207ENST00000458530 FBXL18Q96ME1 805 aa9.71□□□□□ -0.86
VPS50-207ENST00000458530 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.71□□□□□ -0.86
VPS50-207ENST00000458530 CBWD1Q9BRT8 395 aa9.71□□□□□ -0.86
VPS50-207ENST00000458530 LSM14BQ9BX40 385 aaKnown RBP9.71□□□□□ -0.86
VPS50-207ENST00000458530 PBX4Q9BYU1 374 aa9.71□□□□□ -0.86
VPS50-207ENST00000458530 TTYH3Q9C0H2 523 aa9.71□□□□□ -0.86
VPS50-207ENST00000458530 RNPEPQ9H4A4 650 aa9.71□□□□□ -0.86
VPS50-207ENST00000458530 FAM207AQ9NSI2 230 aaPredicted RBP9.71□□□□□ -0.86
VPS50-207ENST00000458530 SPTLC3Q9NUV7 552 aa9.71□□□□□ -0.86
VPS50-207ENST00000458530 PRMT7Q9NVM4 692 aaPredicted RBP9.71□□□□□ -0.86
VPS50-207ENST00000458530 GCNT4Q9P109 453 aa9.71□□□□□ -0.86
VPS50-207ENST00000458530 HCSTQ9UBK5 93 aa9.71□□□□□ -0.86
VPS50-207ENST00000458530 PYCARDQ9ULZ3 195 aa9.71□□□□□ -0.86
VPS50-207ENST00000458530 MYO6Q9UM54 1294 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms