RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 CDR2Q01850 454 aa19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 CEP85LQ5SZL2 805 aa19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 DUPD1Q68J44 220 aa19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 SV2AQ7L0J3 742 aa19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 TAS1R3Q7RTX0 852 aa19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 MICALL1Q8N3F8 863 aa19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 POMGNT1Q8WZA1 660 aa19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 DDX1Q92499 740 aaKnown RBP19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 CD101Q93033 1021 aa19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 WRNIP1Q96S55 665 aa19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 TRIM51Q9BSJ1 452 aa19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 JPH1Q9HDC5 661 aaPredicted RBP19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 CYP39A1Q9NYL5 469 aa19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 LTBP3Q9NS15 1303 aa19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 GOLGA6L10A0A0M3HER8 536 aa19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 FAM187AA6NFU0 413 aa19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 SPATA31C2B4DYI2 1134 aa19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 CPP00450 1065 aa19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 COMTP21964 271 aa19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 MARCKSL1P49006 195 aa19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 GTF2A1P52655 376 aaPredicted RBP19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 KCTD19Q17RG1 926 aaPredicted RBP19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 BRDTQ58F21 947 aaPredicted RBP19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 AADACL2Q6P093 401 aa19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 CCDC60Q8IWA6 550 aaPredicted RBP19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 GPD1LQ8N335 351 aa19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 BCAS4Q8TDM0 211 aa19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 CDHR1Q96JP9 859 aa19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 RAB17Q9H0T7 212 aa19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 DPH5Q9H2P9 285 aa19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 RABEP2Q9H5N1 569 aa19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 SLC9A2Q9UBY0 812 aa19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 CHORDC1Q9UHD1 332 aaPredicted RBP19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 TMEM110-MUSTN1A8MSY1 372 aa19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 FZD9O00144 591 aa19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 GRIN3BO60391 1043 aa19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 COPB2P35606 906 aa19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 ACTR2P61160 394 aa19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 DR1Q01658 176 aa19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 MTMR3Q13615 1198 aa19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 CATSPERGQ6ZRH7 1159 aa19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 TMC3Q7Z5M5 1100 aa19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 TATDN2Q93075 761 aa19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 ERP44Q9BS26 406 aa19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 WNT8AQ9H1J5 351 aa19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 CYP26B1Q9NR63 512 aa19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 ARHGAP28Q9P2N2 729 aa19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 GTF3C4Q9UKN8 822 aa19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 TRPC6Q9Y210 931 aa19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 SYNGAP1Q96PV0 1343 aa19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 DOCK5Q9H7D0 1870 aa19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 STAM2O75886 525 aa19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 HSPA6P17066 643 aa19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 PRKCEQ02156 737 aa19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 DHX34Q14147 1143 aaKnown RBP19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 MESDQ14696 234 aa19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 ADAT2Q7Z6V5 191 aaKnown RBP19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 USP37Q86T82 979 aa19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 TXLNGYQ9BZA5 131 aa19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 MAF1Q9H063 256 aa19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 ATP6V0A4Q9HBG4 840 aa19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 A1CFQ9NQ94 594 aaKnown RBP19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 FAM169AQ9Y6X4 670 aa19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 ZNF541Q9H0D2 1346 aa19.75■□□□□ 0.75
SEMA3B-209ENST00000456560 ATMINO43313 823 aaPredicted RBP19.74■□□□□ 0.75
SEMA3B-209ENST00000456560 PTGIRP43119 386 aa19.74■□□□□ 0.75
SEMA3B-209ENST00000456560 ZNF844Q08AG5 666 aa19.74■□□□□ 0.75
SEMA3B-209ENST00000456560 PRAMEF18Q5VWM3 479 aa19.74■□□□□ 0.75
SEMA3B-209ENST00000456560 TTC19Q6DKK2 380 aaPredicted RBP19.74■□□□□ 0.75
SEMA3B-209ENST00000456560 C15orf39Q6ZRI6 1047 aa19.74■□□□□ 0.75
SEMA3B-209ENST00000456560 TEX13BQ9BXU2 312 aa19.74■□□□□ 0.75
SEMA3B-209ENST00000456560 ACAD9Q9H845 621 aa19.74■□□□□ 0.75
SEMA3B-209ENST00000456560 SEPT9Q9UHD8 586 aaPredicted RBP19.74■□□□□ 0.75
SEMA3B-209ENST00000456560 FZD1Q9UP38 647 aa19.74■□□□□ 0.75
SEMA3B-209ENST00000456560 HNRNPDLO14979 420 aaKnown RBP19.74■□□□□ 0.75
SEMA3B-209ENST00000456560 NR1D1P20393 614 aa19.74■□□□□ 0.75
SEMA3B-209ENST00000456560 CTNNA2P26232 953 aa19.74■□□□□ 0.75
SEMA3B-209ENST00000456560 CTNNA1P35221 906 aaKnown RBP19.74■□□□□ 0.75
SEMA3B-209ENST00000456560 ATP1A2P50993 1020 aa19.74■□□□□ 0.75
SEMA3B-209ENST00000456560 PDCLQ13371 301 aa19.74■□□□□ 0.75
SEMA3B-209ENST00000456560 ZDHHC14Q8IZN3 488 aa19.74■□□□□ 0.75
SEMA3B-209ENST00000456560 PRELID2Q8N945 189 aa19.74■□□□□ 0.75
SEMA3B-209ENST00000456560 OR2W6PQ8NHA6 318 aa19.74■□□□□ 0.75
SEMA3B-209ENST00000456560 ZNF564Q8TBZ8 553 aaPredicted RBP19.74■□□□□ 0.75
SEMA3B-209ENST00000456560 DHX38Q92620 1227 aaKnown RBP19.74■□□□□ 0.75
SEMA3B-209ENST00000456560 NUP85Q9BW27 656 aa19.74■□□□□ 0.75
SEMA3B-209ENST00000456560 POLR3FQ9H1D9 316 aaPredicted RBP19.74■□□□□ 0.75
SEMA3B-209ENST00000456560 ZDHHC18Q9NUE0 388 aa19.74■□□□□ 0.75
SEMA3B-209ENST00000456560 ZNFX1Q9P2E3 1918 aaKnown RBP19.73■□□□□ 0.75
SEMA3B-209ENST00000456560 PHF2O75151 1096 aa19.73■□□□□ 0.75
SEMA3B-209ENST00000456560 ZC3H11AO75152 810 aaKnown RBP eCLIP19.73■□□□□ 0.755e-7■■■■□ 23.3
SEMA3B-209ENST00000456560 PPFIA2O75334 1257 aa19.73■□□□□ 0.75
SEMA3B-209ENST00000456560 GGPS1O95749 300 aa19.73■□□□□ 0.75
SEMA3B-209ENST00000456560 PDE6CP51160 858 aa19.73■□□□□ 0.75
SEMA3B-209ENST00000456560 DRG2P55039 364 aaKnown RBP19.73■□□□□ 0.75
SEMA3B-209ENST00000456560 GCNT1Q02742 428 aa19.73■□□□□ 0.75
SEMA3B-209ENST00000456560 XKR3Q5GH77 459 aa19.73■□□□□ 0.75
SEMA3B-209ENST00000456560 ACAD10Q6JQN1 1059 aa19.73■□□□□ 0.75
SEMA3B-209ENST00000456560 JAMLQ86YT9 394 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms