RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 RAB27AP51159 221 aa18.06■□□□□ 0.48
CCDC90B-202ENST00000455220 ENPEPQ07075 957 aa18.06■□□□□ 0.48
CCDC90B-202ENST00000455220 KCNJ12Q14500 433 aa18.06■□□□□ 0.48
CCDC90B-202ENST00000455220 TCTN1Q2MV58 587 aa18.06■□□□□ 0.48
CCDC90B-202ENST00000455220 SEZ6Q53EL9 994 aa18.06■□□□□ 0.48
CCDC90B-202ENST00000455220 HSP90AA4PQ58FG1 418 aa18.06■□□□□ 0.48
CCDC90B-202ENST00000455220 RTN4RL1Q86UN2 441 aaPredicted RBP18.06■□□□□ 0.48
CCDC90B-202ENST00000455220 BRSK2Q8IWQ3 736 aa18.06■□□□□ 0.48
CCDC90B-202ENST00000455220 SMG8Q8ND04 991 aaKnown RBP18.06■□□□□ 0.48
CCDC90B-202ENST00000455220 MFSD14AQ96MC6 490 aa18.06■□□□□ 0.48
CCDC90B-202ENST00000455220 TRIM6Q9C030 488 aaPredicted RBP18.06■□□□□ 0.48
CCDC90B-202ENST00000455220 METTL14Q9HCE5 456 aaKnown RBP18.06■□□□□ 0.48
CCDC90B-202ENST00000455220 IPPQ9Y573 584 aa18.06■□□□□ 0.48
CCDC90B-202ENST00000455220 A0A0U1RQF3 1178 aa18.05■□□□□ 0.48
CCDC90B-202ENST00000455220 C9IYK1 514 aa18.05■□□□□ 0.48
CCDC90B-202ENST00000455220 PFKMP08237 780 aa18.05■□□□□ 0.48
CCDC90B-202ENST00000455220 STAG3L1P0CL83 205 aa18.05■□□□□ 0.48
CCDC90B-202ENST00000455220 CSF2RAP15509 400 aa18.05■□□□□ 0.48
CCDC90B-202ENST00000455220 CYP24A1Q07973 514 aa18.05■□□□□ 0.48
CCDC90B-202ENST00000455220 UVSSAQ2YD98 709 aa18.05■□□□□ 0.48
CCDC90B-202ENST00000455220 CCDC40Q4G0X9 1142 aa18.05■□□□□ 0.48
CCDC90B-202ENST00000455220 CNKSR3Q6P9H4 555 aa18.05■□□□□ 0.48
CCDC90B-202ENST00000455220 INTS8Q75QN2 995 aaKnown RBP18.05■□□□□ 0.48
CCDC90B-202ENST00000455220 DEFB128Q7Z7B8 93 aa18.05■□□□□ 0.48
CCDC90B-202ENST00000455220 MRPL10Q7Z7H8 261 aaKnown RBP18.05■□□□□ 0.48
CCDC90B-202ENST00000455220 TRIM59Q8IWR1 403 aa18.05■□□□□ 0.48
CCDC90B-202ENST00000455220 TMEM192Q8IY95 271 aa18.05■□□□□ 0.48
CCDC90B-202ENST00000455220 RDH13Q8NBN7 331 aa18.05■□□□□ 0.48
CCDC90B-202ENST00000455220 NXF3Q9H4D5 531 aaKnown RBP18.05■□□□□ 0.48
CCDC90B-202ENST00000455220 MAGEC2Q9UBF1 373 aaPredicted RBP18.05■□□□□ 0.48
CCDC90B-202ENST00000455220 ARMCX3Q9UH62 379 aaPredicted RBP18.05■□□□□ 0.48
CCDC90B-202ENST00000455220 LIMA1Q9UHB6 759 aaKnown RBP18.05■□□□□ 0.48
CCDC90B-202ENST00000455220 PCDHB2Q9Y5E7 798 aa18.05■□□□□ 0.48
CCDC90B-202ENST00000455220 LRRC10BA6NIK2 292 aa18.04■□□□□ 0.48
CCDC90B-202ENST00000455220 SKIP12755 728 aa18.04■□□□□ 0.48
CCDC90B-202ENST00000455220 FAM189BP81408 668 aa18.04■□□□□ 0.48
CCDC90B-202ENST00000455220 BFSP1Q12934 665 aa18.04■□□□□ 0.48
CCDC90B-202ENST00000455220 ENOX2Q16206 610 aaKnown RBP18.04■□□□□ 0.48
CCDC90B-202ENST00000455220 SLC24A5Q71RS6 500 aa18.04■□□□□ 0.48
CCDC90B-202ENST00000455220 APTXQ7Z2E3 356 aaKnown RBP18.04■□□□□ 0.48
CCDC90B-202ENST00000455220 CCDC94Q9BW85 323 aaPredicted RBP18.04■□□□□ 0.48
CCDC90B-202ENST00000455220 C1orf112Q9NSG2 853 aa18.04■□□□□ 0.48
CCDC90B-202ENST00000455220 RBAKQ9NYW8 714 aaPredicted RBP18.04■□□□□ 0.48
CCDC90B-202ENST00000455220 CITO14578 2027 aa18.04■□□□□ 0.48
CCDC90B-202ENST00000455220 MICAL3Q7RTP6 2002 aa18.04■□□□□ 0.48
CCDC90B-202ENST00000455220 RALGAPA2Q2PPJ7 1873 aa18.04■□□□□ 0.48
CCDC90B-202ENST00000455220 MEFVO15553 781 aaPredicted RBP18.04■□□□□ 0.48
CCDC90B-202ENST00000455220 OSTNP61366 133 aa18.04■□□□□ 0.48
CCDC90B-202ENST00000455220 GSE1Q14687 1217 aa18.04■□□□□ 0.48
CCDC90B-202ENST00000455220 PSMD6Q15008 389 aa18.04■□□□□ 0.48
CCDC90B-202ENST00000455220 ZNF598Q86UK7 904 aaKnown RBP18.04■□□□□ 0.48
CCDC90B-202ENST00000455220 RPUSD2Q8IZ73 545 aaKnown RBP18.04■□□□□ 0.48
CCDC90B-202ENST00000455220 PLEKHO2Q8TD55 490 aa18.04■□□□□ 0.48
CCDC90B-202ENST00000455220 ACAP3Q96P50 834 aa18.04■□□□□ 0.48
CCDC90B-202ENST00000455220 SNTG2Q9NY99 539 aa18.04■□□□□ 0.48
CCDC90B-202ENST00000455220 HES2Q9Y543 173 aa18.04■□□□□ 0.48
CCDC90B-202ENST00000455220 ANK1P16157 1881 aa18.03■□□□□ 0.48
CCDC90B-202ENST00000455220 GOLGA6L3A6NEY3 463 aa18.03■□□□□ 0.48
CCDC90B-202ENST00000455220 ENPP3O14638 875 aa18.03■□□□□ 0.48
CCDC90B-202ENST00000455220 CXCL8P10145 99 aa18.03■□□□□ 0.48
CCDC90B-202ENST00000455220 ATF7P17544 494 aaPredicted RBP18.03■□□□□ 0.48
CCDC90B-202ENST00000455220 CDK11BP21127 795 aaKnown RBP18.03■□□□□ 0.48
CCDC90B-202ENST00000455220 WNT7BP56706 349 aa18.03■□□□□ 0.48
CCDC90B-202ENST00000455220 PPIGQ13427 754 aaKnown RBP eCLIP18.03■□□□□ 0.48
CCDC90B-202ENST00000455220 KRT31Q15323 416 aa18.03■□□□□ 0.48
CCDC90B-202ENST00000455220 ECHDC2Q86YB7 292 aa18.03■□□□□ 0.48
CCDC90B-202ENST00000455220 TMC2Q8TDI7 906 aa18.03■□□□□ 0.48
CCDC90B-202ENST00000455220 PARD3BQ8TEW8 1205 aa18.03■□□□□ 0.48
CCDC90B-202ENST00000455220 TUBGCP2Q9BSJ2 902 aa18.03■□□□□ 0.48
CCDC90B-202ENST00000455220 RPF1Q9H9Y2 349 aaKnown RBP18.03■□□□□ 0.48
CCDC90B-202ENST00000455220 IL23AQ9NPF7 189 aa18.03■□□□□ 0.48
CCDC90B-202ENST00000455220 TTC3P53804 2025 aa18.02■□□□□ 0.48
CCDC90B-202ENST00000455220 TTC26A0AVF1 554 aa18.02■□□□□ 0.48
CCDC90B-202ENST00000455220 RECQL4O94761 1208 aa18.02■□□□□ 0.48
CCDC90B-202ENST00000455220 KRT13P13646 458 aa18.02■□□□□ 0.48
CCDC90B-202ENST00000455220 MTIF2P46199 727 aaKnown RBP18.02■□□□□ 0.48
CCDC90B-202ENST00000455220 VAMP7P51809 220 aa18.02■□□□□ 0.48
CCDC90B-202ENST00000455220 CLDN10P78369 228 aa18.02■□□□□ 0.48
CCDC90B-202ENST00000455220 PPP2R3AQ06190 1150 aa18.02■□□□□ 0.48
CCDC90B-202ENST00000455220 MAN2A1Q16706 1144 aa18.02■□□□□ 0.48
CCDC90B-202ENST00000455220 SLC10A6Q3KNW5 377 aa18.02■□□□□ 0.48
CCDC90B-202ENST00000455220 HACE1Q8IYU2 909 aa18.02■□□□□ 0.48
CCDC90B-202ENST00000455220 ANKRD20A12PQ8NF67 263 aa18.02■□□□□ 0.48
CCDC90B-202ENST00000455220 DPF3Q92784 378 aa18.02■□□□□ 0.48
CCDC90B-202ENST00000455220 BADQ92934 168 aa18.02■□□□□ 0.48
CCDC90B-202ENST00000455220 SLC35C1Q96A29 364 aa18.02■□□□□ 0.48
CCDC90B-202ENST00000455220 RNF39Q9H2S5 420 aa18.02■□□□□ 0.48
CCDC90B-202ENST00000455220 PLEKHA5Q9HAU0 1116 aa18.02■□□□□ 0.48
CCDC90B-202ENST00000455220 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.01■□□□□ 0.47
CCDC90B-202ENST00000455220 IL18RAPO95256 599 aa18.01■□□□□ 0.47
CCDC90B-202ENST00000455220 EOMESO95936 686 aa18.01■□□□□ 0.47
CCDC90B-202ENST00000455220 FPGSQ05932 587 aa18.01■□□□□ 0.47
CCDC90B-202ENST00000455220 IKBKEQ14164 716 aa18.01■□□□□ 0.47
CCDC90B-202ENST00000455220 SURF1Q15526 300 aa18.01■□□□□ 0.47
CCDC90B-202ENST00000455220 XKR4Q5GH76 650 aa18.01■□□□□ 0.47
CCDC90B-202ENST00000455220 C1orf220Q5T0J3 134 aa18.01■□□□□ 0.47
CCDC90B-202ENST00000455220 SARM1Q6SZW1 724 aa18.01■□□□□ 0.47
CCDC90B-202ENST00000455220 ALKAL1Q6UXT8 129 aa18.01■□□□□ 0.47
CCDC90B-202ENST00000455220 USP37Q86T82 979 aa18.01■□□□□ 0.47
CCDC90B-202ENST00000455220 CD302Q8IX05 232 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 357.3 ms