RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 CNTN6Q9UQ52 1028 aa7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 JRKLQ9Y4A0 524 aa7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 SCN10AQ9Y5Y9 1956 aa7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 LRRIQ3A6PVS8 624 aaPredicted RBP7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 CAND2O75155 1236 aa7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 SLU7O95391 586 aaKnown RBP7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 CAPN2P17655 700 aa7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 ATICP31939 592 aa7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 MAGEA1P43355 309 aa7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 KLK7P49862 253 aa7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 LACTBP83111 547 aaPredicted RBP7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 MBTD1Q05BQ5 628 aa7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 PPP3CAQ08209 521 aa7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 CRHR2Q13324 411 aa7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 TDRD12Q587J7 1177 aaKnown RBP7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 CCDC122Q5T0U0 273 aa7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 ATF7IP2Q5U623 682 aa7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 TLK2Q86UE8 772 aa7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 RNF149Q8NC42 400 aa7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 MNS1Q8NEH6 495 aa7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 TRIM11Q96F44 468 aa7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 EEF2KMTQ96G04 330 aa7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 GCOM2Q9BZD3 368 aaPredicted RBP7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 IMPG2Q9BZV3 1241 aa7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 R3HDMLQ9H3Y0 253 aa7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 VRTNQ9H8Y1 702 aa7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 C1orf112Q9NSG2 853 aa7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 SAGE1Q9NXZ1 904 aa7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 RBAKQ9NYW8 714 aaPredicted RBP7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 CPSF3Q9UKF6 684 aaKnown RBP7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 ABT1Q9ULW3 272 aaKnown RBP7.39□□□□□ -1.23
ECHDC1-210ENST00000454859 PDCD11Q14690 1871 aaKnown RBP7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 CITO14578 2027 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 ABLIM1O14639 778 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 EPHB6O15197 1021 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 PEX10O60683 326 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 C4BPAP04003 597 aaKnown RBP7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 FAM163BP0C2L3 166 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 YY1P25490 414 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 ADAM17P78536 824 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 DRAP1Q14919 205 aaPredicted RBP7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 DUOXA2Q1HG44 320 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 CBWD6Q4V339 395 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 CBWD3Q5JTY5 395 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 CBWD5Q5RIA9 395 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 PAPD7Q5XG87 772 aaKnown RBP7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 CBWD2Q8IUF1 395 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 SYCE1Q8N0S2 351 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 SLC30A5Q8TAD4 765 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 PXYLP1Q8TE99 480 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 RUBCNQ92622 972 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 SECISBP2LQ93073 1101 aaKnown RBP7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 NOX5Q96PH1 765 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 ADPGKQ9BRR6 497 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 FAM213AQ9BRX8 229 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 MTG1Q9BT17 334 aaPredicted RBP7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 SYT11Q9BT88 431 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 RNPEPQ9H4A4 650 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 PCIF1Q9H4Z3 704 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 REXO2Q9Y3B8 237 aaKnown RBP7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 R3HCC1Q9Y3T6 440 aaKnown RBP7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 FHOD1Q9Y613 1164 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 SQORQ9Y6N5 450 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 SEPT4O43236 478 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 FAM189A1O60320 539 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 CYBAP13498 195 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 PSEN2P49810 448 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 CKAP4Q07065 602 aaKnown RBP7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 MKRN3Q13064 507 aaKnown RBP7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 MTF1Q14872 753 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 SGSM1Q2NKQ1 1148 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 CRELD2Q6UXH1 353 aaPredicted RBP7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 SYT10Q6XYQ8 523 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 SV2AQ7L0J3 742 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 RSPH3Q86UC2 560 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 RHPN2Q8IUC4 686 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 KSR1Q8IVT5 923 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 C17orf53Q8N3J3 647 aaPredicted RBP7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 COPS5Q92905 334 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 CRACR2AQ9BSW2 395 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 TARS2Q9BW92 718 aaKnown RBP7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 SUGCTQ9HAC7 445 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 NLRC4Q9NPP4 1024 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 CDC23Q9UJX2 597 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 NAGPAQ9UK23 515 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 C2CD2Q9Y426 696 aa7.38□□□□□ -1.23
ECHDC1-210ENST00000454859 A0A1B0GUA9 196 aa7.37□□□□□ -1.23
ECHDC1-210ENST00000454859 EFCAB8A8MWE9 144 aa7.37□□□□□ -1.23
ECHDC1-210ENST00000454859 EVI5O60447 810 aa7.37□□□□□ -1.23
ECHDC1-210ENST00000454859 TNNC2P02585 160 aa7.37□□□□□ -1.23
ECHDC1-210ENST00000454859 H2AFZP0C0S5 128 aa7.37□□□□□ -1.23
ECHDC1-210ENST00000454859 TMEM253P0C7T8 217 aa7.37□□□□□ -1.23
ECHDC1-210ENST00000454859 MYBL1P10243 752 aa7.37□□□□□ -1.23
ECHDC1-210ENST00000454859 P4HA1P13674 534 aa7.37□□□□□ -1.23
ECHDC1-210ENST00000454859 TCP1P17987 556 aaKnown RBP7.37□□□□□ -1.23
ECHDC1-210ENST00000454859 GCLMP48507 274 aa7.37□□□□□ -1.23
ECHDC1-210ENST00000454859 GOLGA8FQ08AF8 430 aa7.37□□□□□ -1.23
ECHDC1-210ENST00000454859 GOLGA8DPQ0D2H9 430 aa7.37□□□□□ -1.23
ECHDC1-210ENST00000454859 MFSD10Q14728 455 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms